1FLCA

X-ray structure of the haemagglutinin-esterase-fusion glycoprotein of influenza c virus
Total Genus 103
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
103
sequence length
427
structure length
427
Chain Sequence
EKIKICLQKQVNSSFSLHNGFGGNLYATEEKRMFELVKPKAGASVLNQSTWIGFGDSRTDKSNSAFPRSADVSAKTADKFRFLSGGSLMLSMFGPPGKVDYLYQGCGKHKVFYEGVNWSPHAAINCYRKNWTDIKLNFQKNIYELASQSHCMSLVNALDKTIPLQVTAGTAGNCNNSFLKNPALYTQEVKPSENKCGKENLAFFTLPTQFGTYECKLHLVASCYFIYDSKEVYNKRGCDNYFQVIYDSFGKVVGGLDNRVSPYTGNSGDTPTMQCDMLQLKPGRYSVRSSPRFLLMPERSYCFDMKEKGPVTAVQSIWGKGRESDYAVDQACLSTPGCMLIQKQKPYIGEADDHHGDQEMRELLSGLDYEARCISQSGWVNETSPFTEKYLLPPKFGRCPLAAKEESIPKIPDGLLIPTSGTDTTVT
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
molecule keywords HAEMAGGLUTININ-ESTERASE-FUSION GLYCOPROTEIN
publication title Structure of the haemagglutinin-esterase-fusion glycoprotein of influenza C virus.
pubmed doi rcsb
source organism Influenza c virus (c/johannesburg/1/66)
total genus 103
structure length 427
sequence length 427
chains with identical sequence C, E
ec nomenclature ec 3.1.1.53: Sialate O-acetylesterase.
pdb deposition date 1999-02-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02710 Hema_HEFG Hemagglutinin domain of haemagglutinin-esterase-fusion glycoprotein
A PF03996 Hema_esterase Hemagglutinin esterase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.20.70.20 Mainly Beta Single Sheet Ubiquitin Ligase Nedd4; Chain: W; Ubiquitin Ligase Nedd4; Chain: W; 1flcA01
5E64A 1FLCA 5E66A 5E65A 5E5WA 5E62A
chains in the Genus database with same CATH superfamily
2ZQVA 2ZQUA 2EZ5W 3FSCA 1K9RA 3ODKA 2Q5AA 3TC5A 3LKXA 1EG3A 4A0UA 2ZAJA 2WAEA 5E64A 3KADA 2KXQA 3KAGA 3NTPA 4U85A 2M8IA 3KCEA 1WR7A 3MQHA 2OWOA 2DK7A 2RE3A 2MDIA 4E5RA 3WH0A 2L4JA 3M7NA 2ZQSA 1K9QA 2XP9A 3TCZA 2BA1A 2DWVA 2ZR4A 2YSIA 1O6WA 3LE4A 1I5HW 3KAIA 2M8JA 3TDBA 3MCBB 2JXWA 5E65A 5E62A 2DMVA 2ZQTA 2XPBA 3KABA 3PQHA 4U84A 3KAHA 3FSBA 1FLCA 3L4HA 2M3OW 3LKXB 3M85A 1EG4A 1ZCNA 1WMVA 2Y8NB 1TK7A 2F21A 2XP8A 2XP3A 4REXA 2XP5A 2JX8A 3MCBA 1JMQA 3CNGA 2JMFA 1TR8A 5E66A 2ZR5A 1PINA 2YAJB 5AHTA 2E45A 2ITKA 5CQ2A 5E5WA 2DJYA 2YSBA 5U47A 4QIBA 3MQGA 1NMVA 2YSGA 3KAFA 2XP4A 2YSFA 4U86A 2YSHA 2LAJA 1YW5A 2QRVA 2DK1A 2XP7A 1F8AB 1RP5A 2XPAA 3OOBA 2ZR6A 2WADA 4GLXA 4A0TA 2JV4A 3FS8A 2XP6A
chains in the Genus database with same CATH topology
2ZQVA 2ZQUA 2EZ5W 3FSCA 1K9RA 3ODKA 2Q5AA 3TC5A 3LKXA 1EG3A 4A0UA 2ZAJA 2WAEA 5E64A 3KADA 2KXQA 3KAGA 3NTPA 4U85A 2M8IA 3KCEA 1WR7A 3MQHA 2OWOA 2DK7A 2RE3A 2MDIA 4E5RA 3WH0A 2L4JA 3M7NA 2ZQSA 1K9QA 2XP9A 3TCZA 2BA1A 2DWVA 2ZR4A 2YSIA 1O6WA 3LE4A 1I5HW 3KAIA 2M8JA 3TDBA 3MCBB 2JXWA 5E65A 5E62A 2DMVA 2ZQTA 2XPBA 3KABA 3PQHA 4U84A 3KAHA 3FSBA 1FLCA 3L4HA 2M3OW 3LKXB 3M85A 1EG4A 1ZCNA 1WMVA 2Y8NB 1TK7A 2F21A 2XP8A 2XP3A 4REXA 2XP5A 2JX8A 3MCBA 1JMQA 3CNGA 2JMFA 1TR8A 5E66A 2ZR5A 1PINA 2YAJB 5AHTA 2E45A 2ITKA 5CQ2A 5E5WA 2DJYA 2YSBA 5U47A 4QIBA 3MQGA 1NMVA 2YSGA 3KAFA 2XP4A 2YSFA 4U86A 2YSHA 2LAJA 1YW5A 2QRVA 2DK1A 2XP7A 1F8AB 1RP5A 2XPAA 3OOBA 2ZR6A 2WADA 4GLXA 4A0TA 2JV4A 3FS8A 2XP6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5E64 A;  1FLC A;  5E66 A;  5E65 A;  5E5W A;  5E62 A; 
#chains in the Genus database with same CATH topology
 2ZQV A;  2ZQU A;  2EZ5 W;  3FSC A;  1K9R A;  3ODK A;  2Q5A A;  3TC5 A;  3LKX A;  1EG3 A;  4A0U A;  2ZAJ A;  2WAE A;  5E64 A;  3KAD A;  2KXQ A;  3KAG A;  3NTP A;  4U85 A;  2M8I A;  3KCE A;  1WR7 A;  3MQH A;  2OWO A;  2DK7 A;  2RE3 A;  2MDI A;  4E5R A;  3WH0 A;  2L4J A;  3M7N A;  2ZQS A;  1K9Q A;  2XP9 A;  3TCZ A;  2BA1 A;  2DWV A;  2ZR4 A;  2YSI A;  1O6W A;  3LE4 A;  1I5H W;  3KAI A;  2M8J A;  3TDB A;  3MCB B;  2JXW A;  5E65 A;  5E62 A;  2DMV A;  2ZQT A;  2XPB A;  3KAB A;  3PQH A;  4U84 A;  3KAH A;  3FSB A;  1FLC A;  3L4H A;  2M3O W;  3LKX B;  3M85 A;  1EG4 A;  1ZCN A;  1WMV A;  2Y8N B;  1TK7 A;  2F21 A;  2XP8 A;  2XP3 A;  4REX A;  2XP5 A;  2JX8 A;  3MCB A;  1JMQ A;  3CNG A;  2JMF A;  1TR8 A;  5E66 A;  2ZR5 A;  1PIN A;  2YAJ B;  5AHT A;  2E45 A;  2ITK A;  5CQ2 A;  5E5W A;  2DJY A;  2YSB A;  5U47 A;  4QIB A;  3MQG A;  1NMV A;  2YSG A;  3KAF A;  2XP4 A;  2YSF A;  4U86 A;  2YSH A;  2LAJ A;  1YW5 A;  2QRV A;  2DK1 A;  2XP7 A;  1F8A B;  1RP5 A;  2XPA A;  3OOB A;  2ZR6 A;  2WAD A;  4GLX A;  4A0T A;  2JV4 A;  3FS8 A;  2XP6 A; 
#chains in the Genus database with same CATH homology
 2ZQV A;  2ZQU A;  2EZ5 W;  3FSC A;  1K9R A;  3ODK A;  2Q5A A;  3TC5 A;  3LKX A;  1EG3 A;  4A0U A;  2ZAJ A;  2WAE A;  5E64 A;  3KAD A;  2KXQ A;  3KAG A;  3NTP A;  4U85 A;  2M8I A;  3KCE A;  1WR7 A;  3MQH A;  2OWO A;  2DK7 A;  2RE3 A;  2MDI A;  4E5R A;  3WH0 A;  2L4J A;  3M7N A;  2ZQS A;  1K9Q A;  2XP9 A;  3TCZ A;  2BA1 A;  2DWV A;  2ZR4 A;  2YSI A;  1O6W A;  3LE4 A;  1I5H W;  3KAI A;  2M8J A;  3TDB A;  3MCB B;  2JXW A;  5E65 A;  5E62 A;  2DMV A;  2ZQT A;  2XPB A;  3KAB A;  3PQH A;  4U84 A;  3KAH A;  3FSB A;  1FLC A;  3L4H A;  2M3O W;  3LKX B;  3M85 A;  1EG4 A;  1ZCN A;  1WMV A;  2Y8N B;  1TK7 A;  2F21 A;  2XP8 A;  2XP3 A;  4REX A;  2XP5 A;  2JX8 A;  3MCB A;  1JMQ A;  3CNG A;  2JMF A;  1TR8 A;  5E66 A;  2ZR5 A;  1PIN A;  2YAJ B;  5AHT A;  2E45 A;  2ITK A;  5CQ2 A;  5E5W A;  2DJY A;  2YSB A;  5U47 A;  4QIB A;  3MQG A;  1NMV A;  2YSG A;  3KAF A;  2XP4 A;  2YSF A;  4U86 A;  2YSH A;  2LAJ A;  1YW5 A;  2QRV A;  2DK1 A;  2XP7 A;  1F8A B;  1RP5 A;  2XPA A;  3OOB A;  2ZR6 A;  2WAD A;  4GLX A;  4A0T A;  2JV4 A;  3FS8 A;  2XP6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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