1LTIA

Heat-labile enterotoxin (lt-i) complex with t-antigen
Total Genus 46
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
46
sequence length
185
structure length
185
Chain Sequence
RLYRADSRPPDEIKRSGGLMPRGHNEYFDRGTQMNINLYDHARGTQTGFVRYDDGYVSTSLSLRSAHLAGQSILSGYSTYYIYVIATAPNMFNVNDVLGVYSPHPYEQEVSALGGIPYSQIYGWYRVNFGVIDERLHRNREYRDRYYRNLNIAPAEDGYRLAGFPPDHQAWREEPWIHHAPQGCG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Enterotoxin
molecule keywords HEAT LABILE ENTEROTOXIN TYPE I
publication title Tumor marker disaccharide D-Gal-beta 1, 3-GalNAc complexed to heat-labile enterotoxin from Escherichia coli.
pubmed rcsb
source organism Escherichia coli
total genus 46
structure length 185
sequence length 185
ec nomenclature
pdb deposition date 1996-05-09
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.210.10 Alpha Beta Alpha-Beta Complex Heat-Labile Enterotoxin; Chain A Heat-Labile Enterotoxin, subunit A 1ltiA00
1BCPA 1S5CA 1PTOA 2A5FB 4K6LG 1LTGA 1S5FA 2A5DB 1S5BA 1LTTA 2CB4A 1S5DA 1PRTA 2VSEA 4Z9CA 1S5EA 2VSAA 1HTLA 2CB6A 1LTIA 1LT3A 1XTCA 1LTAA 1LT4A 2A5GB 1LTBA 1LTSA 1TIIA
chains in the Genus database with same CATH superfamily
1BCPA 1S5CA 1PTOA 2A5FB 4K6LG 1LTGA 1S5FA 2A5DB 1S5BA 1LTTA 2CB4A 1S5DA 1PRTA 2VSEA 4Z9CA 1S5EA 2VSAA 1HTLA 2CB6A 1LTIA 1LT3A 1XTCA 1LTAA 1LT4A 2A5GB 1LTBA 1LTSA 1TIIA
chains in the Genus database with same CATH topology
1BCPA 1S5CA 1PTOA 2A5FB 4K6LG 1LTGA 1S5FA 2A5DB 1S5BA 1LTTA 2CB4A 1S5DA 1PRTA 2VSEA 4Z9CA 1S5EA 2VSAA 1HTLA 2CB6A 1LTIA 1LT3A 1XTCA 1LTAA 1LT4A 2A5GB 1LTBA 1LTSA 1TIIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1BCP A;  1S5C A;  1PTO A;  2A5F B;  4K6L G;  1LTG A;  1S5F A;  2A5D B;  1S5B A;  1LTT A;  2CB4 A;  1S5D A;  1PRT A;  2VSE A;  4Z9C A;  1S5E A;  2VSA A;  1HTL A;  2CB6 A;  1LTI A;  1LT3 A;  1XTC A;  1LTA A;  1LT4 A;  2A5G B;  1LTB A;  1LTS A;  1TII A; 
#chains in the Genus database with same CATH topology
 1BCP A;  1S5C A;  1PTO A;  2A5F B;  4K6L G;  1LTG A;  1S5F A;  2A5D B;  1S5B A;  1LTT A;  2CB4 A;  1S5D A;  1PRT A;  2VSE A;  4Z9C A;  1S5E A;  2VSA A;  1HTL A;  2CB6 A;  1LTI A;  1LT3 A;  1XTC A;  1LTA A;  1LT4 A;  2A5G B;  1LTB A;  1LTS A;  1TII A; 
#chains in the Genus database with same CATH homology
 1BCP A;  1S5C A;  1PTO A;  2A5F B;  4K6L G;  1LTG A;  1S5F A;  2A5D B;  1S5B A;  1LTT A;  2CB4 A;  1S5D A;  1PRT A;  2VSE A;  4Z9C A;  1S5E A;  2VSA A;  1HTL A;  2CB6 A;  1LTI A;  1LT3 A;  1XTC A;  1LTA A;  1LT4 A;  2A5G B;  1LTB A;  1LTS A;  1TII A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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