1ISUA

The three-dimensional structure of the high-potential iron-sulfur protein isolated from the purple phototrophic bacterium rhodocyclus tenuis determined and refined at 1.5 angstroms resolution
Total Genus 15
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
62
structure length
62
Chain Sequence
GTNAAMRKAFNYQDTAKNGKKCSGCAQFVPGASPTAAGGCKVIPGDNQIAPGGYCDAFIVKK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Electron transfer(iron-sulfur protein)
source organism Rhodocyclus tenuis
publication title Three-dimensional structure of the high-potential iron-sulfur protein isolated from the purple phototrophic bacterium Rhodocyclus tenuis determined and refined at 1.5 A resolution.
pubmed doi rcsb
molecule keywords HIGH POTENTIAL IRON SULFUR PROTEIN
total genus 15
structure length 62
sequence length 62
chains with identical sequence B
ec nomenclature
pdb deposition date 1992-09-09

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01355 HIPIP High potential iron-sulfur protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.490.10 Few Secondary Structures Irregular High-Potential Iron-Sulfur Protein; Chain A High potential iron-sulphur protein 1isuA00
2AMSA 1PIJA 1EYTA 3A38A 3A39A 3HIPA 1IUAA 1HIPA 3H31A 1JS2A 1HRRA 1HRQA 1NOEA 5D8VA 1PIHA 1ISUA 1NEHA 1B0YA 2FLAA 1HLQA 1CKUA 1HPIA 2HIPA
chains in the Genus database with same CATH superfamily
2AMSA 1PIJA 1EYTA 3A38A 3A39A 3HIPA 1IUAA 1HIPA 3H31A 1JS2A 1HRRA 1HRQA 1NOEA 5D8VA 1PIHA 1ISUA 1NEHA 1B0YA 2FLAA 1HLQA 1CKUA 1HPIA 2HIPA
chains in the Genus database with same CATH topology
2AMSA 1PIJA 1EYTA 3A38A 3A39A 3HIPA 1IUAA 1HIPA 3H31A 1JS2A 1HRRA 1HRQA 1NOEA 5D8VA 1PIHA 1ISUA 1NEHA 1B0YA 2FLAA 1HLQA 1CKUA 1HPIA 2HIPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2AMS A;  1PIJ A;  1EYT A;  3A38 A;  3A39 A;  3HIP A;  1IUA A;  1HIP A;  3H31 A;  1JS2 A;  1HRR A;  1HRQ A;  1NOE A;  5D8V A;  1PIH A;  1ISU A;  1NEH A;  1B0Y A;  2FLA A;  1HLQ A;  1CKU A;  1HPI A;  2HIP A; 
#chains in the Genus database with same CATH topology
 2AMS A;  1PIJ A;  1EYT A;  3A38 A;  3A39 A;  3HIP A;  1IUA A;  1HIP A;  3H31 A;  1JS2 A;  1HRR A;  1HRQ A;  1NOE A;  5D8V A;  1PIH A;  1ISU A;  1NEH A;  1B0Y A;  2FLA A;  1HLQ A;  1CKU A;  1HPI A;  2HIP A; 
#chains in the Genus database with same CATH homology
 2AMS A;  1PIJ A;  1EYT A;  3A38 A;  3A39 A;  3HIP A;  1IUA A;  1HIP A;  3H31 A;  1JS2 A;  1HRR A;  1HRQ A;  1NOE A;  5D8V A;  1PIH A;  1ISU A;  1NEH A;  1B0Y A;  2FLA A;  1HLQ A;  1CKU A;  1HPI A;  2HIP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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