1E8RA

Solution structure of type x cbd
Total Genus 3
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
3
sequence length
50
structure length
50
Chain Sequence
b'MGNQQCNWYGTLYPLCVTTTNGWGWEDQRSCIARSTCAAQPAPFGIVGSG'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords ENDO-1,4-BETA-XYLANASE
publication title Solution Structure of the Cbm10 Cellulose Binding Module from Pseudomonas Xylanase A
pubmed doi rcsb
source organism Pseudomonas fluorescens
molecule tags Hydrolase
total genus 3
structure length 50
sequence length 50
ec nomenclature ec 3.2.1.8: Endo-1,4-beta-xylanase.
pdb deposition date 2000-09-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02013 CBM_10 Cellulose or protein binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.30.32.30 Mainly Beta Roll Xylanase; Chain A CBM10 1e8rA00
1E8RA 1QLDA
chains in the Genus database with same CATH superfamily
1E8RA 1QLDA
chains in the Genus database with same CATH topology
1E8RA 1QLDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1E8R A;  1QLD A; 
#chains in the Genus database with same CATH topology
 1E8R A;  1QLD A; 
#chains in the Genus database with same CATH homology
 1E8R A;  1QLD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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