2RBHA

Gamma-glutamyl cyclotransferase
Total Genus 45
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
45
sequence length
169
structure length
169
Chain Sequence
EESFLYFAYGSNLLTERIHLRNPSAAFFCVARLQDFKLDFGNSQGKTSQTWHGGIATIFQSPGDEVWGVVWKMNKSNLNSLDEQAGVKSGMYVVIEVKVATQEGKEITCRSYLMTNYESAPPSPQYKKIICMGAKENGLPLEYQEKLKAIEPNDYTGKVSEEIEDIIKK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The identification and structural characterization of C7orf24 as gamma-glutamyl cyclotransferase. An essential enzyme in the gamma-glutamyl cycle
pubmed doi rcsb
molecule tags Transferase
source organism Homo sapiens
molecule keywords Gamma-glutamyl cyclotransferase
total genus 45
structure length 169
sequence length 169
chains with identical sequence B
ec nomenclature ec 4.3.2.9: Gamma-glutamylcyclotransferase.
pdb deposition date 2007-09-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13772 AIG2_2 AIG2-like family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.490.10 Alpha Beta Roll Hypothetical upf0131 protein ytfp Gamma-glutamyl cyclotransferase-like 2rbhA00
4ISSA 3JUCA 5C5ZA 2JQVA 3JUDA 1VKBA 2RBHA 1XHSA 3JUBA 2KL2A 2G0QA 2Q53A 2PN7A 4ISTA 1V30A 3CRYA 2I5TA 2QIKA
chains in the Genus database with same CATH superfamily
4ISSA 2RBHA 3VKGA 1V30A 3JUCA 3JUDA 1VKBA 3JUBA 3VKHA 2PN7A 2JQVA 2G0QA 2QIKA 5C5ZA 2Q53A 4ISTA 3CRYA 2KL2A 1XHSA 2XVOA 2I5TA
chains in the Genus database with same CATH topology
4ISSA 3JUCA 5C5ZA 2JQVA 3JUDA 1VKBA 2RBHA 1XHSA 3JUBA 2KL2A 2G0QA 2Q53A 2PN7A 4ISTA 1V30A 3CRYA 2I5TA 2QIKA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4ISS A;  3JUC A;  5C5Z A;  2JQV A;  3JUD A;  1VKB A;  2RBH A;  1XHS A;  3JUB A;  2KL2 A;  2G0Q A;  2Q53 A;  2PN7 A;  4IST A;  1V30 A;  3CRY A;  2I5T A;  2QIK A; 
#chains in the Genus database with same CATH topology
 4ISS A;  2RBH A;  3VKG A;  1V30 A;  3JUC A;  3JUD A;  1VKB A;  3JUB A;  3VKH A;  2PN7 A;  2JQV A;  2G0Q A;  2QIK A;  5C5Z A;  2Q53 A;  4IST A;  3CRY A;  2KL2 A;  1XHS A;  2XVO A;  2I5T A; 
#chains in the Genus database with same CATH homology
 4ISS A;  3JUC A;  5C5Z A;  2JQV A;  3JUD A;  1VKB A;  2RBH A;  1XHS A;  3JUB A;  2KL2 A;  2G0Q A;  2Q53 A;  2PN7 A;  4IST A;  1V30 A;  3CRY A;  2I5T A;  2QIK A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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