The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
38
|
sequence length |
117
|
structure length |
117
|
Chain Sequence |
TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVEPDSYFIAAQSASENHIWVQATIRSGRTEKQKEELLLRLTQEIALILGIPNEEVWVYITEIPGSNMTEYGRL
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
Crystal Structures of the Native and Inactivated Cg10062, a cis-3-Chloroacrylic Acid Dehalogenase from Corynebacterium glutamicum: Implications for the Evolution of cis-3-Chloroacrylic Acid Dehalogenase Activity in the Tautomerase Superfamily
rcsb |
| molecule tags |
Hydrolase
|
| source organism |
Corynebacterium glutamicum
|
| molecule keywords |
Putative tautomerase
|
| total genus |
38
|
| structure length |
117
|
| sequence length |
117
|
| ec nomenclature |
ec
3.8.1.-: |
| pdb deposition date | 2010-05-21 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Alpha Beta | 2-Layer Sandwich | Macrophage Migration Inhibitory Factor | Macrophage Migration Inhibitory Factor |
#chains in the Genus database with same CATH superfamily 3CE4 A; 3N4D A; 3E6Q A; 2FM7 A; 1MIF A; 2WKF B; 3L5V A; 1U9D A; 3T5S A; 4F2K A; 5CLN A; 1GIF A; 2OPA A; 2FLZ A; 3L5R A; 4PKZ A; 1UIZ A; 3HOF A; 3MF7 A; 4LKB A; 3EJ7 A; 1S0Y B; 4P01 A; 1DPT A; 2X4K A; 4XX7 A; 3KER A; 3N4H A; 4P7S A; 3JSF A; 3GAC A; 3EJ9 B; 3MLC A; 4X19 A; 3WNR A; 5HVS A; 3JTU A; 1P1G A; 4GRN A; 5J7P A; 1GD0 A; 3EJ3 A; 4GRP A; 3B9S A; 2GDG A; 1CGQ A; 2OS5 A; 3FWU A; 4Q3F A; 4GRO A; 4Z15 A; 3SMC A; 3L5P A; 3L5U A; 4U5P A; 4PLU A; 1OTG A; 4XX8 A; 5J7Q A; 4OSF A; 4DH4 A; 2WKB A; 4JJ9 A; 1GCZ A; 2AAG A; 4X1C C; 2AAJ A; 2AAL A; 4JCU A; 3MB2 A; 3RF4 A; 1MFF A; 4GRR A; 3WNT A; 4TRF A; 5BS9 A; 4OTA A; 3DJH A; 3EJ9 A; 4WR8 A; 5B4O A; 3M20 A; 5BSI A; 4P0H A; 3RY0 A; 3SMB A; 4M1A A; 2OOH A; 4OYQ A; 4OTC A; 4P7M A; 2WKF A; 4ETG A; 5EIZ A; 1FIM A; 2OP8 A; 1CA7 A; 3L5T A; 3WNS A; 4NWQ B; 4TRU A; 3MJZ A; 3M21 A; 4OTB A; 4PKK A; 5BSC A; 1GYX A; 3DJI A; 3ABF A; 5HVV A; 2FLT A; 5HVT A; 1S0Y A; 1BJP A; 4NWP E; 3IJJ A; 4GRQ A; 2XCZ A; 1GYY A; 4GRU A; 2OOW A; 4FAZ A; 2ORM A; 4LHP A; 4FDX A; 4EVG A; 4Z1T A; 1MFI A; 3GAD A; 3EJ7 B; 1LJT A; 3JSG A; 5BSJ A; 4EUI A; 1MWW A; 3IJG A; 3L5S A; 3N4G A; 4LHO A; 4WRB A; 3KAN A; 5CLO A; 1HFO A; 3U18 A; 4K9G A; 3FWT A; 3B64 A; 3RF5 A; 3C6V A; 3MB2 B; 1GYJ A; 4U5R A; 4X1C A; 1OTF A; 2OOZ A; 4GUM A; 3MF8 A; 4Z1U A; 3EJ3 B; #chains in the Genus database with same CATH topology 3CE4 A; 3N4D A; 3E6Q A; 2FM7 A; 1MIF A; 2WKF B; 3L5V A; 1U9D A; 3T5S A; 4F2K A; 5CLN A; 1GIF A; 2OPA A; 2FLZ A; 3L5R A; 4PKZ A; 1UIZ A; 3HOF A; 3MF7 A; 4LKB A; 3EJ7 A; 1S0Y B; 4P01 A; 1DPT A; 2X4K A; 4XX7 A; 3KER A; 3N4H A; 4P7S A; 3JSF A; 3GAC A; 3EJ9 B; 3MLC A; 4X19 A; 3WNR A; 5HVS A; 3JTU A; 1P1G A; 4GRN A; 5J7P A; 1GD0 A; 3EJ3 A; 4GRP A; 3B9S A; 2GDG A; 1CGQ A; 2OS5 A; 3FWU A; 4Q3F A; 4GRO A; 4Z15 A; 3SMC A; 3L5P A; 3L5U A; 4U5P A; 4PLU A; 1OTG A; 4XX8 A; 5J7Q A; 4OSF A; 4DH4 A; 2WKB A; 4JJ9 A; 1GCZ A; 2AAG A; 4X1C C; 2AAJ A; 2AAL A; 4JCU A; 3MB2 A; 3RF4 A; 1MFF A; 4GRR A; 3WNT A; 4TRF A; 5BS9 A; 4OTA A; 3DJH A; 3EJ9 A; 4WR8 A; 5B4O A; 3M20 A; 5BSI A; 4P0H A; 3RY0 A; 3SMB A; 4M1A A; 2OOH A; 4OYQ A; 4OTC A; 4P7M A; 2WKF A; 4ETG A; 5EIZ A; 1FIM A; 2OP8 A; 1CA7 A; 3L5T A; 3WNS A; 4NWQ B; 4TRU A; 3MJZ A; 3M21 A; 4OTB A; 4PKK A; 5BSC A; 1GYX A; 3DJI A; 3ABF A; 5HVV A; 2FLT A; 5HVT A; 1S0Y A; 1BJP A; 4NWP E; 3IJJ A; 4GRQ A; 2XCZ A; 1GYY A; 4GRU A; 2OOW A; 4FAZ A; 2ORM A; 4LHP A; 4FDX A; 4EVG A; 4Z1T A; 1MFI A; 3GAD A; 3EJ7 B; 1LJT A; 3JSG A; 5BSJ A; 4EUI A; 1MWW A; 3IJG A; 3L5S A; 3N4G A; 4LHO A; 4WRB A; 3KAN A; 5CLO A; 1HFO A; 3U18 A; 4K9G A; 3FWT A; 3B64 A; 3RF5 A; 3C6V A; 3MB2 B; 1GYJ A; 4U5R A; 4X1C A; 1OTF A; 2OOZ A; 4GUM A; 3MF8 A; 4Z1U A; 3EJ3 B; #chains in the Genus database with same CATH homology 3CE4 A; 3N4D A; 3E6Q A; 2FM7 A; 1MIF A; 2WKF B; 3L5V A; 1U9D A; 3T5S A; 4F2K A; 5CLN A; 1GIF A; 2OPA A; 2FLZ A; 3L5R A; 4PKZ A; 1UIZ A; 3HOF A; 3MF7 A; 4LKB A; 3EJ7 A; 1S0Y B; 4P01 A; 1DPT A; 2X4K A; 4XX7 A; 3KER A; 3N4H A; 4P7S A; 3JSF A; 3GAC A; 3EJ9 B; 3MLC A; 4X19 A; 3WNR A; 5HVS A; 3JTU A; 1P1G A; 4GRN A; 5J7P A; 1GD0 A; 3EJ3 A; 4GRP A; 3B9S A; 2GDG A; 1CGQ A; 2OS5 A; 3FWU A; 4Q3F A; 4GRO A; 4Z15 A; 3SMC A; 3L5P A; 3L5U A; 4U5P A; 4PLU A; 1OTG A; 4XX8 A; 5J7Q A; 4OSF A; 4DH4 A; 2WKB A; 4JJ9 A; 1GCZ A; 2AAG A; 4X1C C; 2AAJ A; 2AAL A; 4JCU A; 3MB2 A; 3RF4 A; 1MFF A; 4GRR A; 3WNT A; 4TRF A; 5BS9 A; 4OTA A; 3DJH A; 3EJ9 A; 4WR8 A; 5B4O A; 3M20 A; 5BSI A; 4P0H A; 3RY0 A; 3SMB A; 4M1A A; 2OOH A; 4OYQ A; 4OTC A; 4P7M A; 2WKF A; 4ETG A; 5EIZ A; 1FIM A; 2OP8 A; 1CA7 A; 3L5T A; 3WNS A; 4NWQ B; 4TRU A; 3MJZ A; 3M21 A; 4OTB A; 4PKK A; 5BSC A; 1GYX A; 3DJI A; 3ABF A; 5HVV A; 2FLT A; 5HVT A; 1S0Y A; 1BJP A; 4NWP E; 3IJJ A; 4GRQ A; 2XCZ A; 1GYY A; 4GRU A; 2OOW A; 4FAZ A; 2ORM A; 4LHP A; 4FDX A; 4EVG A; 4Z1T A; 1MFI A; 3GAD A; 3EJ7 B; 1LJT A; 3JSG A; 5BSJ A; 4EUI A; 1MWW A; 3IJG A; 3L5S A; 3N4G A; 4LHO A; 4WRB A; 3KAN A; 5CLO A; 1HFO A; 3U18 A; 4K9G A; 3FWT A; 3B64 A; 3RF5 A; 3C6V A; 3MB2 B; 1GYJ A; 4U5R A; 4X1C A; 1OTF A; 2OOZ A; 4GUM A; 3MF8 A; 4Z1U A; 3EJ3 B;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
