The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
13
|
sequence length |
42
|
structure length |
42
|
Chain Sequence |
SALQDLLRTLKSPSSPQQQQQVLNILKSNPQLMAAFIKQRTA
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule tags |
Immune system
|
| molecule keywords |
Interferon regulatory factor 3
|
| publication title |
Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins.
pubmed doi rcsb |
| source organism |
Homo sapiens
|
| total genus |
13
|
| structure length |
42
|
| sequence length |
42
|
| chains with identical sequence |
D, F, H
|
| ec nomenclature |
ec
2.3.1.48: Histone acetyltransferase. |
| pdb deposition date | 2016-04-18 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Orthogonal Bundle | Creb-binding Protein; Chain: A | Nuclear receptor coactivator, CREB-bp-like, interlocking domain |
#chains in the Genus database with same CATH superfamily 2KKJ A; 2C52 A; 1ZOQ C; 1JJS A; 5JEM C; 1KBH B; 2L14 A; #chains in the Genus database with same CATH topology 2KKJ A; 2C52 A; 1ZOQ C; 1JJS A; 5JEM C; 1KBH B; 2L14 A; #chains in the Genus database with same CATH homology 2KKJ A; 2C52 A; 1ZOQ C; 1JJS A; 5JEM C; 1KBH B; 2L14 A;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
