1U2NA

Structure cbp taz1 domain
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
100
structure length
100
Chain Sequence
ATGPTADPEKRKLIQQQLVLLLHAHKCQRREQANGEVRACSLPHCRTMKNVLNHMTHCQAPKACQVAHCASSRQIISHWKNCTRHDCPVCLPLKNASDKR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords CREB binding protein
publication title CBP/p300 TAZ1 domain forms a structured scaffold for ligand binding
pubmed doi rcsb
source organism Mus musculus
total genus 35
structure length 100
sequence length 100
ec nomenclature ec 2.3.1.48: Histone acetyltransferase.
pdb deposition date 2004-07-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02135 zf-TAZ TAZ zinc finger
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1020.10 Mainly Alpha Up-down Bundle CREB-binding Protein; Chain A TAZ domain 1u2nA00
2MH0B 3IO2A 1L3EB 1P4QB 2MZDA 1L8CA 1F81A 2KA4A 1R8UB 2LWWA 2KJEA 3T92A 5HP0A 2KA6A 3P57P 2K8FA 1U2NA
chains in the Genus database with same CATH superfamily
2MH0B 3IO2A 1L3EB 1P4QB 2MZDA 1L8CA 1F81A 2KA4A 1R8UB 2LWWA 2KJEA 3T92A 5HP0A 2KA6A 3P57P 2K8FA 1U2NA
chains in the Genus database with same CATH topology
2MH0B 3IO2A 1L3EB 1P4QB 2MZDA 1L8CA 1F81A 2KA4A 1R8UB 2LWWA 2KJEA 3T92A 5HP0A 2KA6A 3P57P 2K8FA 1U2NA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2MH0 B;  3IO2 A;  1L3E B;  1P4Q B;  2MZD A;  1L8C A;  1F81 A;  2KA4 A;  1R8U B;  2LWW A;  2KJE A;  3T92 A;  5HP0 A;  2KA6 A;  3P57 P;  2K8F A;  1U2N A; 
#chains in the Genus database with same CATH topology
 2MH0 B;  3IO2 A;  1L3E B;  1P4Q B;  2MZD A;  1L8C A;  1F81 A;  2KA4 A;  1R8U B;  2LWW A;  2KJE A;  3T92 A;  5HP0 A;  2KA6 A;  3P57 P;  2K8F A;  1U2N A; 
#chains in the Genus database with same CATH homology
 2MH0 B;  3IO2 A;  1L3E B;  1P4Q B;  2MZD A;  1L8C A;  1F81 A;  2KA4 A;  1R8U B;  2LWW A;  2KJE A;  3T92 A;  5HP0 A;  2KA6 A;  3P57 P;  2K8F A;  1U2N A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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