2BJGA

Crystal structure of conjugated bile acid hydrolase from clostridium perfringens in complex with reaction products taurine and deoxycholate
Total Genus 79
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
328
structure length
328
Chain Sequence
CTGLALETKDGLHLFGRNMDIEYSFNQSIIFIPRNFKCVNKSNKKELTTKYAVLGMGTIFDDYPTFADGMNEKGLGCAGLNFPVYVSYSKEDIEGKTNIPVYNFLLWVLANFSSVEEVKEALKNANIVDIPISENIPNTTLHWMISDITGKSIVVEQTKEKLNVFDNNIGVLTNSPTFDWHVANLNQYVGLRYNQVPEFKLGDQSLTALGQGTGLVGLPGDFTPASRFIRVAFLRDAMIKNDKDSIDLIEFFHILNNVAMVRGSTRTVEEKSDLTQYTSCMCLEKGIYYYNTYENNQINAIDMNKENLDGNEIKTYKYNKTLSINHVN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Conjugated Bile Acid Hydrolase is a Tetrameric N-Terminal Thiol Hydrolase with Specific Recognition of its Cholyl But not of its Tauryl Product
pubmed doi rcsb
molecule tags Hydrolase
source organism Clostridium perfringens
molecule keywords CHOLOYLGLYCINE HYDROLASE
total genus 79
structure length 328
sequence length 328
chains with identical sequence B
ec nomenclature ec 3.5.1.24: Choloylglycine hydrolase.
pdb deposition date 2005-02-02

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02275 CBAH Linear amide C-N hydrolases, choloylglycine hydrolase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.60.10 Alpha Beta 4-Layer Sandwich Penicillin V Acylase; Chain A Penicillin V Acylase; Chain A 2bjgA01
2RG2A 3PVAA 2IWMA 4WL3A 2HEZA 2BJGA 2HF0A 3MJIA 2RLCA 2X1CA 2PVAA 2Z71A 2RF8A 2X1EA 2QUYA 3HBCA 2X1DA 2OQCA 4WL2A 5HKEA 2BJFA 3GVZA
chains in the Genus database with same CATH superfamily
2RG2A 3PVAA 2IWMA 4WL3A 2HEZA 2BJGA 2HF0A 3MJIA 2RLCA 2X1CA 2PVAA 2Z71A 2RF8A 3FBXA 2X1EA 2QUYA 3FGTB 3HBCA 2X1DA 2OQCA 3FGRB 4WL2A 3GVZA 5HKEA 3FGWA 4BWCB 2BJFA
chains in the Genus database with same CATH topology
2RG2A 3PVAA 2IWMA 4WL3A 2HEZA 2BJGA 2HF0A 3MJIA 2RLCA 2X1CA 2PVAA 2Z71A 2RF8A 3FBXA 2X1EA 2QUYA 3FGTB 3HBCA 2X1DA 2OQCA 3FGRB 4WL2A 3GVZA 5HKEA 3FGWA 4BWCB 2BJFA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2RG2 A;  3PVA A;  2IWM A;  4WL3 A;  2HEZ A;  2BJG A;  2HF0 A;  3MJI A;  2RLC A;  2X1C A;  2PVA A;  2Z71 A;  2RF8 A;  2X1E A;  2QUY A;  3HBC A;  2X1D A;  2OQC A;  4WL2 A;  5HKE A;  2BJF A;  3GVZ A; 
#chains in the Genus database with same CATH topology
 2RG2 A;  3PVA A;  2IWM A;  4WL3 A;  2HEZ A;  2BJG A;  2HF0 A;  3MJI A;  2RLC A;  2X1C A;  2PVA A;  2Z71 A;  2RF8 A;  3FBX A;  2X1E A;  2QUY A;  3FGT B;  3HBC A;  2X1D A;  2OQC A;  3FGR B;  4WL2 A;  3GVZ A;  5HKE A;  3FGW A;  4BWC B;  2BJF A; 
#chains in the Genus database with same CATH homology
 2RG2 A;  3PVA A;  2IWM A;  4WL3 A;  2HEZ A;  2BJG A;  2HF0 A;  3MJI A;  2RLC A;  2X1C A;  2PVA A;  2Z71 A;  2RF8 A;  3FBX A;  2X1E A;  2QUY A;  3FGT B;  3HBC A;  2X1D A;  2OQC A;  3FGR B;  4WL2 A;  3GVZ A;  5HKE A;  3FGW A;  4BWC B;  2BJF A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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