2BUFA

Arginine feed-back inhibitable acetylglutamate kinase
Total Genus 88
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
88
sequence length
300
structure length
292
Chain Sequence
TLSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVTRQIIDIGHVGEVTGVNVGLLNMLVKGDFIPVIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVNELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNRKRH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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molecule tags Transferase
molecule keywords ACETYLGLUTAMATE KINASE
publication title Structural Bases of Feed-Back Control of Arginine Biosynthesis, Revealed by the Structure of Two Hexameric N-Acetylglutamate Kinases, from Thermotoga Maritima and Pseudomonas Aeruginosa
pubmed doi rcsb
source organism Pseudomonas aeruginosa
total genus 88
structure length 292
sequence length 300
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2005-06-12

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2bufA00
2J4JA 4NDOB 2BTYA 2BUFA 3L86A 2OGXA 3K4YA 3K52A 3QVHA 1B7BA 3ZZGA 2J0XA 2V5HA 3LL5A 4JZ7A 4USJA 2J5TA 2R8VA 4F6TA 4KZTA 1YBDA 3WWNA 3KZFA 2J5VA 4NDQA 3WWMA 4NDRA 3AB2A 4AB7A 1GS5A 3QUNA 2JJ4A 2JI5A 3K56A 3S6KA 3C1NA 3C20A 3ZZFA 1OH9A 3NWYA 4I49A 3S6HA 3D40A 1OHAA 4NDPB 4AXSA 3K4OA 4A7XA 3EK6A 3EK5A 1E19A 4NDOA 3U6UA 2VA1A 3C1MA 2R98A 2WE5A 3TVIA 3QVFA 2J4KA 1GSJA 4A7WA 3QURA 4OLCA 2BRXA 2BRIA 2RD5A 2X2WA 2WXBA 4F6TB 2BMUA 4JZ9A 4JZ8A 2IJ9A 1Z9DA 2J4LA 2V4YA 2A1FA 2WE4A 3LKKA 4NDQB 3S6GA 3D2PA 4NDRB 2AKOA 2AP9A 3D41A 3B8GA 2W21A 3QUOA 2OGXB 2E9YA 4Q1TA 3T7BA 2JJXA 3L76A 2BNFA 4NDPA 2BNDA 3AB4A 3ZZIA 3D2MA 1OHBA 2HMFA 3LL9A 2BNEA 3AAWA 2J0WA 2CDQA 3ZZHA
chains in the Genus database with same CATH superfamily
2J4JA 4NDOB 2BTYA 2BUFA 3L86A 2OGXA 3K4YA 3K52A 3QVHA 1B7BA 3ZZGA 2J0XA 2V5HA 3LL5A 4JZ7A 4USJA 2J5TA 2R8VA 4F6TA 4KZTA 1YBDA 3WWNA 3KZFA 2J5VA 4NDQA 3WWMA 4NDRA 3AB2A 4AB7A 1GS5A 3QUNA 2JJ4A 2JI5A 3K56A 3S6KA 3C1NA 3C20A 3ZZFA 1OH9A 3NWYA 4I49A 3S6HA 3D40A 1OHAA 4NDPB 4AXSA 3K4OA 4A7XA 3EK6A 3EK5A 1E19A 4NDOA 3U6UA 2VA1A 3C1MA 2R98A 2WE5A 3TVIA 3QVFA 2J4KA 1GSJA 4A7WA 3QURA 4OLCA 2BRXA 2BRIA 2RD5A 2X2WA 2WXBA 4F6TB 2BMUA 4JZ9A 4JZ8A 2IJ9A 1Z9DA 2J4LA 2V4YA 2A1FA 2WE4A 3LKKA 4NDQB 3S6GA 3D2PA 4NDRB 2AKOA 2AP9A 3D41A 3B8GA 2W21A 3QUOA 2OGXB 2E9YA 4Q1TA 3T7BA 2JJXA 3L76A 2BNFA 4NDPA 2BNDA 3AB4A 3ZZIA 3D2MA 1OHBA 2HMFA 3LL9A 2BNEA 3AAWA 2J0WA 2CDQA 3ZZHA
chains in the Genus database with same CATH topology
2J4JA 4NDOB 2BTYA 2BUFA 3L86A 2OGXA 3K4YA 3K52A 3QVHA 1B7BA 3ZZGA 2J0XA 2V5HA 3LL5A 4JZ7A 4USJA 2J5TA 2R8VA 4F6TA 4KZTA 1YBDA 3WWNA 3KZFA 2J5VA 4NDQA 3WWMA 4NDRA 3AB2A 4AB7A 1GS5A 3QUNA 2JJ4A 2JI5A 3K56A 3S6KA 3C1NA 3C20A 3ZZFA 1OH9A 3NWYA 4I49A 3S6HA 3D40A 1OHAA 4NDPB 4AXSA 3K4OA 4A7XA 3EK6A 3EK5A 1E19A 4NDOA 3U6UA 2VA1A 3C1MA 2R98A 2WE5A 3TVIA 3QVFA 2J4KA 1GSJA 4A7WA 3QURA 4OLCA 2BRXA 2BRIA 2RD5A 2X2WA 2WXBA 4F6TB 2BMUA 4JZ9A 4JZ8A 2IJ9A 1Z9DA 2J4LA 2V4YA 2A1FA 2WE4A 3LKKA 4NDQB 3S6GA 3D2PA 4NDRB 2AKOA 2AP9A 3D41A 3B8GA 2W21A 3QUOA 2OGXB 2E9YA 4Q1TA 3T7BA 2JJXA 3L76A 2BNFA 4NDPA 2BNDA 3AB4A 3ZZIA 3D2MA 1OHBA 2HMFA 3LL9A 2BNEA 3AAWA 2J0WA 2CDQA 3ZZHA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2J4J A;  4NDO B;  2BTY A;  2BUF A;  3L86 A;  2OGX A;  3K4Y A;  3K52 A;  3QVH A;  1B7B A;  3ZZG A;  2J0X A;  2V5H A;  3LL5 A;  4JZ7 A;  4USJ A;  2J5T A;  2R8V A;  4F6T A;  4KZT A;  1YBD A;  3WWN A;  3KZF A;  2J5V A;  4NDQ A;  3WWM A;  4NDR A;  3AB2 A;  4AB7 A;  1GS5 A;  3QUN A;  2JJ4 A;  2JI5 A;  3K56 A;  3S6K A;  3C1N A;  3C20 A;  3ZZF A;  1OH9 A;  3NWY A;  4I49 A;  3S6H A;  3D40 A;  1OHA A;  4NDP B;  4AXS A;  3K4O A;  4A7X A;  3EK6 A;  3EK5 A;  1E19 A;  4NDO A;  3U6U A;  2VA1 A;  3C1M A;  2R98 A;  2WE5 A;  3TVI A;  3QVF A;  2J4K A;  1GSJ A;  4A7W A;  3QUR A;  4OLC A;  2BRX A;  2BRI A;  2RD5 A;  2X2W A;  2WXB A;  4F6T B;  2BMU A;  4JZ9 A;  4JZ8 A;  2IJ9 A;  1Z9D A;  2J4L A;  2V4Y A;  2A1F A;  2WE4 A;  3LKK A;  4NDQ B;  3S6G A;  3D2P A;  4NDR B;  2AKO A;  2AP9 A;  3D41 A;  3B8G A;  2W21 A;  3QUO A;  2OGX B;  2E9Y A;  4Q1T A;  3T7B A;  2JJX A;  3L76 A;  2BNF A;  4NDP A;  2BND A;  3AB4 A;  3ZZI A;  3D2M A;  1OHB A;  2HMF A;  3LL9 A;  2BNE A;  3AAW A;  2J0W A;  2CDQ A;  3ZZH A; 
#chains in the Genus database with same CATH topology
 2J4J A;  4NDO B;  2BTY A;  2BUF A;  3L86 A;  2OGX A;  3K4Y A;  3K52 A;  3QVH A;  1B7B A;  3ZZG A;  2J0X A;  2V5H A;  3LL5 A;  4JZ7 A;  4USJ A;  2J5T A;  2R8V A;  4F6T A;  4KZT A;  1YBD A;  3WWN A;  3KZF A;  2J5V A;  4NDQ A;  3WWM A;  4NDR A;  3AB2 A;  4AB7 A;  1GS5 A;  3QUN A;  2JJ4 A;  2JI5 A;  3K56 A;  3S6K A;  3C1N A;  3C20 A;  3ZZF A;  1OH9 A;  3NWY A;  4I49 A;  3S6H A;  3D40 A;  1OHA A;  4NDP B;  4AXS A;  3K4O A;  4A7X A;  3EK6 A;  3EK5 A;  1E19 A;  4NDO A;  3U6U A;  2VA1 A;  3C1M A;  2R98 A;  2WE5 A;  3TVI A;  3QVF A;  2J4K A;  1GSJ A;  4A7W A;  3QUR A;  4OLC A;  2BRX A;  2BRI A;  2RD5 A;  2X2W A;  2WXB A;  4F6T B;  2BMU A;  4JZ9 A;  4JZ8 A;  2IJ9 A;  1Z9D A;  2J4L A;  2V4Y A;  2A1F A;  2WE4 A;  3LKK A;  4NDQ B;  3S6G A;  3D2P A;  4NDR B;  2AKO A;  2AP9 A;  3D41 A;  3B8G A;  2W21 A;  3QUO A;  2OGX B;  2E9Y A;  4Q1T A;  3T7B A;  2JJX A;  3L76 A;  2BNF A;  4NDP A;  2BND A;  3AB4 A;  3ZZI A;  3D2M A;  1OHB A;  2HMF A;  3LL9 A;  2BNE A;  3AAW A;  2J0W A;  2CDQ A;  3ZZH A; 
#chains in the Genus database with same CATH homology
 2J4J A;  4NDO B;  2BTY A;  2BUF A;  3L86 A;  2OGX A;  3K4Y A;  3K52 A;  3QVH A;  1B7B A;  3ZZG A;  2J0X A;  2V5H A;  3LL5 A;  4JZ7 A;  4USJ A;  2J5T A;  2R8V A;  4F6T A;  4KZT A;  1YBD A;  3WWN A;  3KZF A;  2J5V A;  4NDQ A;  3WWM A;  4NDR A;  3AB2 A;  4AB7 A;  1GS5 A;  3QUN A;  2JJ4 A;  2JI5 A;  3K56 A;  3S6K A;  3C1N A;  3C20 A;  3ZZF A;  1OH9 A;  3NWY A;  4I49 A;  3S6H A;  3D40 A;  1OHA A;  4NDP B;  4AXS A;  3K4O A;  4A7X A;  3EK6 A;  3EK5 A;  1E19 A;  4NDO A;  3U6U A;  2VA1 A;  3C1M A;  2R98 A;  2WE5 A;  3TVI A;  3QVF A;  2J4K A;  1GSJ A;  4A7W A;  3QUR A;  4OLC A;  2BRX A;  2BRI A;  2RD5 A;  2X2W A;  2WXB A;  4F6T B;  2BMU A;  4JZ9 A;  4JZ8 A;  2IJ9 A;  1Z9D A;  2J4L A;  2V4Y A;  2A1F A;  2WE4 A;  3LKK A;  4NDQ B;  3S6G A;  3D2P A;  4NDR B;  2AKO A;  2AP9 A;  3D41 A;  3B8G A;  2W21 A;  3QUO A;  2OGX B;  2E9Y A;  4Q1T A;  3T7B A;  2JJX A;  3L76 A;  2BNF A;  4NDP A;  2BND A;  3AB4 A;  3ZZI A;  3D2M A;  1OHB A;  2HMF A;  3LL9 A;  2BNE A;  3AAW A;  2J0W A;  2CDQ A;  3ZZH A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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