2WXBA

Acetylglutamate kinase from escherichia coli free of substrates
Total Genus 86
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
86
sequence length
257
structure length
257
Chain Sequence
MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
molecule keywords ACETYLGLUTAMATE KINASE
publication title Two Crystal Structures of Escherichia Coli N-Acetyl-L-Glutamate Kinase Demonstrate the Cycling between Open and Closed Conformations.
pubmed doi rcsb
source organism Escherichia coli
total genus 86
structure length 257
sequence length 257
chains with identical sequence B
ec nomenclature ec 2.7.2.8: Acetylglutamate kinase.
pdb deposition date 2009-11-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 2wxbA00
2WXBA 4AXSA 2IJ9A 3B8GA 1GS5A 4Q1TA 3LKKA 2JJ4A 4NDOA 2RD5A 4F6TA 4AB7A 2J4JA 2V4YA 3QUNA 3ZZGA 2J4LA 2BNDA 2BMUA 2V5HA 2R8VA 2WE5A 1OHBA 1Z9DA 2J4KA 4NDPB 3C20A 3NWYA 2CDQA 3K56A 4OLCA 3K4OA 3U6UA 3C1NA 2JI5A 2J5TA 2HMFA 3QURA 4I49A 4NDQB 4NDRB 2A1FA 2E9YA 1OH9A 3AAWA 2BRXA 3KZFA 2JJXA 2J0WA 2W21A 2R98A 3QUOA 2OGXB 2VA1A 3S6KA 2J5VA 3AB4A 2J0XA 3ZZHA 4NDPA 3T7BA 3QVFA 4KZTA 4USJA 3ZZIA 4JZ8A 4JZ9A 3WWMA 2AP9A 3EK5A 1OHAA 3EK6A 3K52A 2WE4A 2BNEA 3WWNA 1B7BA 1GSJA 4NDRA 3C1MA 4A7XA 3L86A 3D40A 4NDOB 3TVIA 1YBDA 2BNFA 2BUFA 3AB2A 4F6TB 2OGXA 3ZZFA 3LL9A 3S6GA 4A7WA 3D2PA 2X2WA 2AKOA 1E19A 3S6HA 3LL5A 2BTYA 4JZ7A 3K4YA 3L76A 3D41A 2BRIA 3D2MA 4NDQA 3QVHA
chains in the Genus database with same CATH superfamily
2WXBA 4AXSA 2IJ9A 3B8GA 1GS5A 4Q1TA 3LKKA 2JJ4A 4NDOA 2RD5A 4F6TA 4AB7A 2J4JA 2V4YA 3QUNA 3ZZGA 2J4LA 2BNDA 2BMUA 2V5HA 2R8VA 2WE5A 1OHBA 1Z9DA 2J4KA 4NDPB 3C20A 3NWYA 2CDQA 3K56A 4OLCA 3K4OA 3U6UA 3C1NA 2JI5A 2J5TA 2HMFA 3QURA 4I49A 4NDQB 4NDRB 2A1FA 2E9YA 1OH9A 3AAWA 2BRXA 3KZFA 2JJXA 2J0WA 2W21A 2R98A 3QUOA 2OGXB 2VA1A 3S6KA 2J5VA 3AB4A 2J0XA 3ZZHA 4NDPA 3T7BA 3QVFA 4KZTA 4USJA 3ZZIA 4JZ8A 4JZ9A 3WWMA 2AP9A 3EK5A 1OHAA 3EK6A 3K52A 2WE4A 2BNEA 3WWNA 1B7BA 1GSJA 4NDRA 3C1MA 4A7XA 3L86A 3D40A 4NDOB 3TVIA 1YBDA 2BNFA 2BUFA 3AB2A 4F6TB 2OGXA 3ZZFA 3LL9A 3S6GA 4A7WA 3D2PA 2X2WA 2AKOA 1E19A 3S6HA 3LL5A 2BTYA 4JZ7A 3K4YA 3L76A 3D41A 2BRIA 3D2MA 4NDQA 3QVHA
chains in the Genus database with same CATH topology
2WXBA 4AXSA 2IJ9A 3B8GA 1GS5A 4Q1TA 3LKKA 2JJ4A 4NDOA 2RD5A 4F6TA 4AB7A 2J4JA 2V4YA 3QUNA 3ZZGA 2J4LA 2BNDA 2BMUA 2V5HA 2R8VA 2WE5A 1OHBA 1Z9DA 2J4KA 4NDPB 3C20A 3NWYA 2CDQA 3K56A 4OLCA 3K4OA 3U6UA 3C1NA 2JI5A 2J5TA 2HMFA 3QURA 4I49A 4NDQB 4NDRB 2A1FA 2E9YA 1OH9A 3AAWA 2BRXA 3KZFA 2JJXA 2J0WA 2W21A 2R98A 3QUOA 2OGXB 2VA1A 3S6KA 2J5VA 3AB4A 2J0XA 3ZZHA 4NDPA 3T7BA 3QVFA 4KZTA 4USJA 3ZZIA 4JZ8A 4JZ9A 3WWMA 2AP9A 3EK5A 1OHAA 3EK6A 3K52A 2WE4A 2BNEA 3WWNA 1B7BA 1GSJA 4NDRA 3C1MA 4A7XA 3L86A 3D40A 4NDOB 3TVIA 1YBDA 2BNFA 2BUFA 3AB2A 4F6TB 2OGXA 3ZZFA 3LL9A 3S6GA 4A7WA 3D2PA 2X2WA 2AKOA 1E19A 3S6HA 3LL5A 2BTYA 4JZ7A 3K4YA 3L76A 3D41A 2BRIA 3D2MA 4NDQA 3QVHA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2WXB A;  4AXS A;  2IJ9 A;  3B8G A;  1GS5 A;  4Q1T A;  3LKK A;  2JJ4 A;  4NDO A;  2RD5 A;  4F6T A;  4AB7 A;  2J4J A;  2V4Y A;  3QUN A;  3ZZG A;  2J4L A;  2BND A;  2BMU A;  2V5H A;  2R8V A;  2WE5 A;  1OHB A;  1Z9D A;  2J4K A;  4NDP B;  3C20 A;  3NWY A;  2CDQ A;  3K56 A;  4OLC A;  3K4O A;  3U6U A;  3C1N A;  2JI5 A;  2J5T A;  2HMF A;  3QUR A;  4I49 A;  4NDQ B;  4NDR B;  2A1F A;  2E9Y A;  1OH9 A;  3AAW A;  2BRX A;  3KZF A;  2JJX A;  2J0W A;  2W21 A;  2R98 A;  3QUO A;  2OGX B;  2VA1 A;  3S6K A;  2J5V A;  3AB4 A;  2J0X A;  3ZZH A;  4NDP A;  3T7B A;  3QVF A;  4KZT A;  4USJ A;  3ZZI A;  4JZ8 A;  4JZ9 A;  3WWM A;  2AP9 A;  3EK5 A;  1OHA A;  3EK6 A;  3K52 A;  2WE4 A;  2BNE A;  3WWN A;  1B7B A;  1GSJ A;  4NDR A;  3C1M A;  4A7X A;  3L86 A;  3D40 A;  4NDO B;  3TVI A;  1YBD A;  2BNF A;  2BUF A;  3AB2 A;  4F6T B;  2OGX A;  3ZZF A;  3LL9 A;  3S6G A;  4A7W A;  3D2P A;  2X2W A;  2AKO A;  1E19 A;  3S6H A;  3LL5 A;  2BTY A;  4JZ7 A;  3K4Y A;  3L76 A;  3D41 A;  2BRI A;  3D2M A;  4NDQ A;  3QVH A; 
#chains in the Genus database with same CATH topology
 2WXB A;  4AXS A;  2IJ9 A;  3B8G A;  1GS5 A;  4Q1T A;  3LKK A;  2JJ4 A;  4NDO A;  2RD5 A;  4F6T A;  4AB7 A;  2J4J A;  2V4Y A;  3QUN A;  3ZZG A;  2J4L A;  2BND A;  2BMU A;  2V5H A;  2R8V A;  2WE5 A;  1OHB A;  1Z9D A;  2J4K A;  4NDP B;  3C20 A;  3NWY A;  2CDQ A;  3K56 A;  4OLC A;  3K4O A;  3U6U A;  3C1N A;  2JI5 A;  2J5T A;  2HMF A;  3QUR A;  4I49 A;  4NDQ B;  4NDR B;  2A1F A;  2E9Y A;  1OH9 A;  3AAW A;  2BRX A;  3KZF A;  2JJX A;  2J0W A;  2W21 A;  2R98 A;  3QUO A;  2OGX B;  2VA1 A;  3S6K A;  2J5V A;  3AB4 A;  2J0X A;  3ZZH A;  4NDP A;  3T7B A;  3QVF A;  4KZT A;  4USJ A;  3ZZI A;  4JZ8 A;  4JZ9 A;  3WWM A;  2AP9 A;  3EK5 A;  1OHA A;  3EK6 A;  3K52 A;  2WE4 A;  2BNE A;  3WWN A;  1B7B A;  1GSJ A;  4NDR A;  3C1M A;  4A7X A;  3L86 A;  3D40 A;  4NDO B;  3TVI A;  1YBD A;  2BNF A;  2BUF A;  3AB2 A;  4F6T B;  2OGX A;  3ZZF A;  3LL9 A;  3S6G A;  4A7W A;  3D2P A;  2X2W A;  2AKO A;  1E19 A;  3S6H A;  3LL5 A;  2BTY A;  4JZ7 A;  3K4Y A;  3L76 A;  3D41 A;  2BRI A;  3D2M A;  4NDQ A;  3QVH A; 
#chains in the Genus database with same CATH homology
 2WXB A;  4AXS A;  2IJ9 A;  3B8G A;  1GS5 A;  4Q1T A;  3LKK A;  2JJ4 A;  4NDO A;  2RD5 A;  4F6T A;  4AB7 A;  2J4J A;  2V4Y A;  3QUN A;  3ZZG A;  2J4L A;  2BND A;  2BMU A;  2V5H A;  2R8V A;  2WE5 A;  1OHB A;  1Z9D A;  2J4K A;  4NDP B;  3C20 A;  3NWY A;  2CDQ A;  3K56 A;  4OLC A;  3K4O A;  3U6U A;  3C1N A;  2JI5 A;  2J5T A;  2HMF A;  3QUR A;  4I49 A;  4NDQ B;  4NDR B;  2A1F A;  2E9Y A;  1OH9 A;  3AAW A;  2BRX A;  3KZF A;  2JJX A;  2J0W A;  2W21 A;  2R98 A;  3QUO A;  2OGX B;  2VA1 A;  3S6K A;  2J5V A;  3AB4 A;  2J0X A;  3ZZH A;  4NDP A;  3T7B A;  3QVF A;  4KZT A;  4USJ A;  3ZZI A;  4JZ8 A;  4JZ9 A;  3WWM A;  2AP9 A;  3EK5 A;  1OHA A;  3EK6 A;  3K52 A;  2WE4 A;  2BNE A;  3WWN A;  1B7B A;  1GSJ A;  4NDR A;  3C1M A;  4A7X A;  3L86 A;  3D40 A;  4NDO B;  3TVI A;  1YBD A;  2BNF A;  2BUF A;  3AB2 A;  4F6T B;  2OGX A;  3ZZF A;  3LL9 A;  3S6G A;  4A7W A;  3D2P A;  2X2W A;  2AKO A;  1E19 A;  3S6H A;  3LL5 A;  2BTY A;  4JZ7 A;  3K4Y A;  3L76 A;  3D41 A;  2BRI A;  3D2M A;  4NDQ A;  3QVH A;
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...
How to cite