3QVHA

Crystal structure of fosfomycin resistance kinase foma from streptomyces wedmorensis complexed with adp
Total Genus 79
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
79
sequence length
271
structure length
260
Chain Sequence
SGLVPRGSHMTPDFLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAFGHGAIRHAFSLAGLTEATFEVKKRWAEKLRGIGVDAFPLQLAAMCTLRNGIPQLRSEVLRDVLDHGALPVLAGDALFDEHGKLWAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAGGDTILPEVDARSPEQAYAALWGSGAMHTKLDALVTCARRGAECFIMRGDPGSDLEFLTAPFSSWPAHVRSTRITT
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
molecule keywords FomA protein
publication title Structural and biochemical insights into the mechanism of fosfomycin phosphorylation by fosfomycin resistance kinase FomA.
pubmed doi rcsb
source organism Streptomyces wedmorensis
total genus 79
structure length 260
sequence length 271
ec nomenclature
pdb deposition date 2011-02-25

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3qvhA00
3L76A 3QURA 3K4OA 2W21A 4A7WA 1GS5A 3LL9A 1Z9DA 2J0XA 3K4YA 4NDQB 3EK6A 2E9YA 2WE4A 3C1NA 3S6GA 3AB4A 4JZ9A 4Q1TA 3ZZHA 2BNDA 3QUOA 3AB2A 3T7BA 4NDRA 2BTYA 2J4LA 3S6KA 2JI5A 2AP9A 1B7BA 3QVFA 3TVIA 3ZZGA 3ZZFA 4JZ8A 3AAWA 2BRXA 4F6TA 2JJ4A 3K56A 3QVHA 1OHAA 3D40A 4I49A 4JZ7A 2AKOA 2RD5A 4USJA 3D2MA 4NDRB 2BNEA 3EK5A 3B8GA 2R8VA 3NWYA 1YBDA 3LL5A 1E19A 2IJ9A 2J4JA 1GSJA 4NDPA 3KZFA 2OGXA 4NDPB 2V5HA 2J0WA 3QUNA 4KZTA 2BNFA 3K52A 2CDQA 4NDOA 4OLCA 4F6TB 2BRIA 2WE5A 2JJXA 3ZZIA 3C1MA 3L86A 2J5TA 3C20A 2X2WA 3D2PA 4AB7A 2WXBA 4A7XA 3WWMA 2HMFA 4AXSA 4NDQA 2VA1A 2V4YA 1OHBA 2OGXB 1OH9A 2J5VA 2R98A 3LKKA 2BMUA 3U6UA 3D41A 2A1FA 4NDOB 3WWNA 3S6HA 2J4KA 2BUFA
chains in the Genus database with same CATH superfamily
3L76A 3QURA 3K4OA 2W21A 4A7WA 1GS5A 3LL9A 1Z9DA 2J0XA 3K4YA 4NDQB 3EK6A 2E9YA 2WE4A 3C1NA 3S6GA 3AB4A 4JZ9A 4Q1TA 3ZZHA 2BNDA 3QUOA 3AB2A 3T7BA 4NDRA 2BTYA 2J4LA 3S6KA 2JI5A 2AP9A 1B7BA 3QVFA 3TVIA 3ZZGA 3ZZFA 4JZ8A 3AAWA 2BRXA 4F6TA 2JJ4A 3K56A 3QVHA 1OHAA 3D40A 4I49A 4JZ7A 2AKOA 2RD5A 4USJA 3D2MA 4NDRB 2BNEA 3EK5A 3B8GA 2R8VA 3NWYA 1YBDA 3LL5A 1E19A 2IJ9A 2J4JA 1GSJA 4NDPA 3KZFA 2OGXA 4NDPB 2V5HA 2J0WA 3QUNA 4KZTA 2BNFA 3K52A 2CDQA 4NDOA 4OLCA 4F6TB 2BRIA 2WE5A 2JJXA 3ZZIA 3C1MA 3L86A 2J5TA 3C20A 2X2WA 3D2PA 4AB7A 2WXBA 4A7XA 3WWMA 2HMFA 4AXSA 4NDQA 2VA1A 2V4YA 1OHBA 2OGXB 1OH9A 2J5VA 2R98A 3LKKA 2BMUA 3U6UA 3D41A 2A1FA 4NDOB 3WWNA 3S6HA 2J4KA 2BUFA
chains in the Genus database with same CATH topology
3L76A 3QURA 3K4OA 2W21A 4A7WA 1GS5A 3LL9A 1Z9DA 2J0XA 3K4YA 4NDQB 3EK6A 2E9YA 2WE4A 3C1NA 3S6GA 3AB4A 4JZ9A 4Q1TA 3ZZHA 2BNDA 3QUOA 3AB2A 3T7BA 4NDRA 2BTYA 2J4LA 3S6KA 2JI5A 2AP9A 1B7BA 3QVFA 3TVIA 3ZZGA 3ZZFA 4JZ8A 3AAWA 2BRXA 4F6TA 2JJ4A 3K56A 3QVHA 1OHAA 3D40A 4I49A 4JZ7A 2AKOA 2RD5A 4USJA 3D2MA 4NDRB 2BNEA 3EK5A 3B8GA 2R8VA 3NWYA 1YBDA 3LL5A 1E19A 2IJ9A 2J4JA 1GSJA 4NDPA 3KZFA 2OGXA 4NDPB 2V5HA 2J0WA 3QUNA 4KZTA 2BNFA 3K52A 2CDQA 4NDOA 4OLCA 4F6TB 2BRIA 2WE5A 2JJXA 3ZZIA 3C1MA 3L86A 2J5TA 3C20A 2X2WA 3D2PA 4AB7A 2WXBA 4A7XA 3WWMA 2HMFA 4AXSA 4NDQA 2VA1A 2V4YA 1OHBA 2OGXB 1OH9A 2J5VA 2R98A 3LKKA 2BMUA 3U6UA 3D41A 2A1FA 4NDOB 3WWNA 3S6HA 2J4KA 2BUFA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 3L76 A;  3QUR A;  3K4O A;  2W21 A;  4A7W A;  1GS5 A;  3LL9 A;  1Z9D A;  2J0X A;  3K4Y A;  4NDQ B;  3EK6 A;  2E9Y A;  2WE4 A;  3C1N A;  3S6G A;  3AB4 A;  4JZ9 A;  4Q1T A;  3ZZH A;  2BND A;  3QUO A;  3AB2 A;  3T7B A;  4NDR A;  2BTY A;  2J4L A;  3S6K A;  2JI5 A;  2AP9 A;  1B7B A;  3QVF A;  3TVI A;  3ZZG A;  3ZZF A;  4JZ8 A;  3AAW A;  2BRX A;  4F6T A;  2JJ4 A;  3K56 A;  3QVH A;  1OHA A;  3D40 A;  4I49 A;  4JZ7 A;  2AKO A;  2RD5 A;  4USJ A;  3D2M A;  4NDR B;  2BNE A;  3EK5 A;  3B8G A;  2R8V A;  3NWY A;  1YBD A;  3LL5 A;  1E19 A;  2IJ9 A;  2J4J A;  1GSJ A;  4NDP A;  3KZF A;  2OGX A;  4NDP B;  2V5H A;  2J0W A;  3QUN A;  4KZT A;  2BNF A;  3K52 A;  2CDQ A;  4NDO A;  4OLC A;  4F6T B;  2BRI A;  2WE5 A;  2JJX A;  3ZZI A;  3C1M A;  3L86 A;  2J5T A;  3C20 A;  2X2W A;  3D2P A;  4AB7 A;  2WXB A;  4A7X A;  3WWM A;  2HMF A;  4AXS A;  4NDQ A;  2VA1 A;  2V4Y A;  1OHB A;  2OGX B;  1OH9 A;  2J5V A;  2R98 A;  3LKK A;  2BMU A;  3U6U A;  3D41 A;  2A1F A;  4NDO B;  3WWN A;  3S6H A;  2J4K A;  2BUF A; 
#chains in the Genus database with same CATH topology
 3L76 A;  3QUR A;  3K4O A;  2W21 A;  4A7W A;  1GS5 A;  3LL9 A;  1Z9D A;  2J0X A;  3K4Y A;  4NDQ B;  3EK6 A;  2E9Y A;  2WE4 A;  3C1N A;  3S6G A;  3AB4 A;  4JZ9 A;  4Q1T A;  3ZZH A;  2BND A;  3QUO A;  3AB2 A;  3T7B A;  4NDR A;  2BTY A;  2J4L A;  3S6K A;  2JI5 A;  2AP9 A;  1B7B A;  3QVF A;  3TVI A;  3ZZG A;  3ZZF A;  4JZ8 A;  3AAW A;  2BRX A;  4F6T A;  2JJ4 A;  3K56 A;  3QVH A;  1OHA A;  3D40 A;  4I49 A;  4JZ7 A;  2AKO A;  2RD5 A;  4USJ A;  3D2M A;  4NDR B;  2BNE A;  3EK5 A;  3B8G A;  2R8V A;  3NWY A;  1YBD A;  3LL5 A;  1E19 A;  2IJ9 A;  2J4J A;  1GSJ A;  4NDP A;  3KZF A;  2OGX A;  4NDP B;  2V5H A;  2J0W A;  3QUN A;  4KZT A;  2BNF A;  3K52 A;  2CDQ A;  4NDO A;  4OLC A;  4F6T B;  2BRI A;  2WE5 A;  2JJX A;  3ZZI A;  3C1M A;  3L86 A;  2J5T A;  3C20 A;  2X2W A;  3D2P A;  4AB7 A;  2WXB A;  4A7X A;  3WWM A;  2HMF A;  4AXS A;  4NDQ A;  2VA1 A;  2V4Y A;  1OHB A;  2OGX B;  1OH9 A;  2J5V A;  2R98 A;  3LKK A;  2BMU A;  3U6U A;  3D41 A;  2A1F A;  4NDO B;  3WWN A;  3S6H A;  2J4K A;  2BUF A; 
#chains in the Genus database with same CATH homology
 3L76 A;  3QUR A;  3K4O A;  2W21 A;  4A7W A;  1GS5 A;  3LL9 A;  1Z9D A;  2J0X A;  3K4Y A;  4NDQ B;  3EK6 A;  2E9Y A;  2WE4 A;  3C1N A;  3S6G A;  3AB4 A;  4JZ9 A;  4Q1T A;  3ZZH A;  2BND A;  3QUO A;  3AB2 A;  3T7B A;  4NDR A;  2BTY A;  2J4L A;  3S6K A;  2JI5 A;  2AP9 A;  1B7B A;  3QVF A;  3TVI A;  3ZZG A;  3ZZF A;  4JZ8 A;  3AAW A;  2BRX A;  4F6T A;  2JJ4 A;  3K56 A;  3QVH A;  1OHA A;  3D40 A;  4I49 A;  4JZ7 A;  2AKO A;  2RD5 A;  4USJ A;  3D2M A;  4NDR B;  2BNE A;  3EK5 A;  3B8G A;  2R8V A;  3NWY A;  1YBD A;  3LL5 A;  1E19 A;  2IJ9 A;  2J4J A;  1GSJ A;  4NDP A;  3KZF A;  2OGX A;  4NDP B;  2V5H A;  2J0W A;  3QUN A;  4KZT A;  2BNF A;  3K52 A;  2CDQ A;  4NDO A;  4OLC A;  4F6T B;  2BRI A;  2WE5 A;  2JJX A;  3ZZI A;  3C1M A;  3L86 A;  2J5T A;  3C20 A;  2X2W A;  3D2P A;  4AB7 A;  2WXB A;  4A7X A;  3WWM A;  2HMF A;  4AXS A;  4NDQ A;  2VA1 A;  2V4Y A;  1OHB A;  2OGX B;  1OH9 A;  2J5V A;  2R98 A;  3LKK A;  2BMU A;  3U6U A;  3D41 A;  2A1F A;  4NDO B;  3WWN A;  3S6H A;  2J4K A;  2BUF A;
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...
How to cite