3L76A

Crystal structure of aspartate kinase from synechocystis
Total Genus 176
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
176
sequence length
599
structure length
585
Chain Sequence
ALIVQKFGGTSVGTVERIQAVAQRIKRTVQGGNSLVVVVSAMGKSTDVLVDLAQQISPNPCRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTEILEIRPDRLEHHLREGKVVVVAGFQGIHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPRAVEIARNYGIPLVVRSSWSDEPGTKVVAPPVQNRSLVGLEIAKAVDGVEYDADQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSAIAPALRSYPEADQEAEIIVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMISTSEVKVSCVIDQRDADRAIAALSNAFGVTLSPPKNQTDLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAEGDSSQAEAILQPLIKDWLDAAIVVNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIATSEIKISCVVPQDRGVDALKAAHSAFNLAGTKTVTVPA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
molecule tags Transferase
molecule keywords Aspartokinase
publication title A new mode of dimerization of allosteric enzymes with ACT domains revealed by the crystal structure of the aspartate kinase from Cyanobacteria
pubmed doi rcsb
source organism Synechocystis
total genus 176
structure length 585
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.7.2.4: Aspartate kinase.
pdb deposition date 2009-12-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00696 AA_kinase Amino acid kinase family
A PF01842 ACT ACT domain
A PF13840 ACT_7 ACT domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1160.10 Alpha Beta 3-Layer(aba) Sandwich Carbamate kinase Acetylglutamate kinase-like 3l76A01
2A1FA 2WXBA 2J4JA 3AAWA 3C20A 4I49A 3ZZHA 2J5TA 1YBDA 3C1NA 4F6TB 4F6TA 3S6HA 4NDQB 4NDQA 3C1MA 4NDRB 2WE5A 4NDRA 3T7BA 4NDOB 3AB2A 4NDOA 4A7XA 4JZ9A 2HMFA 2AP9A 2BRXA 3WWNA 1OHAA 3LL9A 3D2PA 3D2MA 3LL5A 4JZ7A 2R8VA 2V5HA 3ZZFA 4AB7A 2E9YA 2J0WA 2BRIA 2BNDA 3AB4A 3QUNA 3EK5A 3ZZIA 3L76A 2BNFA 1GS5A 2JJXA 2OGXB 3QVHA 4KZTA 2OGXA 2RD5A 3D40A 2J5VA 3KZFA 3WWMA 3QURA 2BNEA 3ZZGA 1E19A 3QVFA 3D41A 3QUOA 1GSJA 3B8GA 3U6UA 3LKKA 3L86A 3S6KA 3K56A 4JZ8A 1B7BA 2X2WA 4OLCA 2BUFA 4AXSA 2BTYA 2JI5A 2IJ9A 4A7WA 4Q1TA 4NDPB 4NDPA 2J4LA 3K52A 2J0XA 3K4YA 2VA1A 2BMUA 2R98A 2V4YA 3S6GA 1Z9DA 3NWYA 2JJ4A 3EK6A 2CDQA 2J4KA 4USJA 1OHBA 2AKOA 3K4OA 3TVIA 2WE4A 1OH9A 2W21A
chains in the Genus database with same CATH superfamily
2A1FA 2WXBA 2J4JA 3AAWA 3C20A 4I49A 3ZZHA 2J5TA 1YBDA 3C1NA 4F6TB 4F6TA 3S6HA 4NDQB 4NDQA 3C1MA 4NDRB 2WE5A 4NDRA 3T7BA 4NDOB 3AB2A 4NDOA 4A7XA 4JZ9A 2HMFA 2AP9A 2BRXA 3WWNA 1OHAA 3LL9A 3D2PA 3D2MA 3LL5A 4JZ7A 2R8VA 2V5HA 3ZZFA 4AB7A 2E9YA 2J0WA 2BRIA 2BNDA 3AB4A 3QUNA 3EK5A 3ZZIA 3L76A 2BNFA 1GS5A 2JJXA 2OGXB 3QVHA 4KZTA 2OGXA 2RD5A 3D40A 2J5VA 3KZFA 3WWMA 3QURA 2BNEA 3ZZGA 1E19A 3QVFA 3D41A 3QUOA 1GSJA 3B8GA 3U6UA 3LKKA 3L86A 3S6KA 3K56A 4JZ8A 1B7BA 2X2WA 4OLCA 2BUFA 4AXSA 2BTYA 2JI5A 2IJ9A 4A7WA 4Q1TA 4NDPB 4NDPA 2J4LA 3K52A 2J0XA 3K4YA 2VA1A 2BMUA 2R98A 2V4YA 3S6GA 1Z9DA 3NWYA 2JJ4A 3EK6A 2CDQA 2J4KA 4USJA 1OHBA 2AKOA 3K4OA 3TVIA 2WE4A 1OH9A 2W21A
chains in the Genus database with same CATH topology
2A1FA 2WXBA 2J4JA 3AAWA 3C20A 4I49A 3ZZHA 2J5TA 1YBDA 3C1NA 4F6TB 4F6TA 3S6HA 4NDQB 4NDQA 3C1MA 4NDRB 2WE5A 4NDRA 3T7BA 4NDOB 3AB2A 4NDOA 4A7XA 4JZ9A 2HMFA 2AP9A 2BRXA 3WWNA 1OHAA 3LL9A 3D2PA 3D2MA 3LL5A 4JZ7A 2R8VA 2V5HA 3ZZFA 4AB7A 2E9YA 2J0WA 2BRIA 2BNDA 3AB4A 3QUNA 3EK5A 3ZZIA 3L76A 2BNFA 1GS5A 2JJXA 2OGXB 3QVHA 4KZTA 2OGXA 2RD5A 3D40A 2J5VA 3KZFA 3WWMA 3QURA 2BNEA 3ZZGA 1E19A 3QVFA 3D41A 3QUOA 1GSJA 3B8GA 3U6UA 3LKKA 3L86A 3S6KA 3K56A 4JZ8A 1B7BA 2X2WA 4OLCA 2BUFA 4AXSA 2BTYA 2JI5A 2IJ9A 4A7WA 4Q1TA 4NDPB 4NDPA 2J4LA 3K52A 2J0XA 3K4YA 2VA1A 2BMUA 2R98A 2V4YA 3S6GA 1Z9DA 3NWYA 2JJ4A 3EK6A 2CDQA 2J4KA 4USJA 1OHBA 2AKOA 3K4OA 3TVIA 2WE4A 1OH9A 2W21A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2A1F A;  2WXB A;  2J4J A;  3AAW A;  3C20 A;  4I49 A;  3ZZH A;  2J5T A;  1YBD A;  3C1N A;  4F6T B;  4F6T A;  3S6H A;  4NDQ B;  4NDQ A;  3C1M A;  4NDR B;  2WE5 A;  4NDR A;  3T7B A;  4NDO B;  3AB2 A;  4NDO A;  4A7X A;  4JZ9 A;  2HMF A;  2AP9 A;  2BRX A;  3WWN A;  1OHA A;  3LL9 A;  3D2P A;  3D2M A;  3LL5 A;  4JZ7 A;  2R8V A;  2V5H A;  3ZZF A;  4AB7 A;  2E9Y A;  2J0W A;  2BRI A;  2BND A;  3AB4 A;  3QUN A;  3EK5 A;  3ZZI A;  3L76 A;  2BNF A;  1GS5 A;  2JJX A;  2OGX B;  3QVH A;  4KZT A;  2OGX A;  2RD5 A;  3D40 A;  2J5V A;  3KZF A;  3WWM A;  3QUR A;  2BNE A;  3ZZG A;  1E19 A;  3QVF A;  3D41 A;  3QUO A;  1GSJ A;  3B8G A;  3U6U A;  3LKK A;  3L86 A;  3S6K A;  3K56 A;  4JZ8 A;  1B7B A;  2X2W A;  4OLC A;  2BUF A;  4AXS A;  2BTY A;  2JI5 A;  2IJ9 A;  4A7W A;  4Q1T A;  4NDP B;  4NDP A;  2J4L A;  3K52 A;  2J0X A;  3K4Y A;  2VA1 A;  2BMU A;  2R98 A;  2V4Y A;  3S6G A;  1Z9D A;  3NWY A;  2JJ4 A;  3EK6 A;  2CDQ A;  2J4K A;  4USJ A;  1OHB A;  2AKO A;  3K4O A;  3TVI A;  2WE4 A;  1OH9 A;  2W21 A; 
#chains in the Genus database with same CATH topology
 2A1F A;  2WXB A;  2J4J A;  3AAW A;  3C20 A;  4I49 A;  3ZZH A;  2J5T A;  1YBD A;  3C1N A;  4F6T B;  4F6T A;  3S6H A;  4NDQ B;  4NDQ A;  3C1M A;  4NDR B;  2WE5 A;  4NDR A;  3T7B A;  4NDO B;  3AB2 A;  4NDO A;  4A7X A;  4JZ9 A;  2HMF A;  2AP9 A;  2BRX A;  3WWN A;  1OHA A;  3LL9 A;  3D2P A;  3D2M A;  3LL5 A;  4JZ7 A;  2R8V A;  2V5H A;  3ZZF A;  4AB7 A;  2E9Y A;  2J0W A;  2BRI A;  2BND A;  3AB4 A;  3QUN A;  3EK5 A;  3ZZI A;  3L76 A;  2BNF A;  1GS5 A;  2JJX A;  2OGX B;  3QVH A;  4KZT A;  2OGX A;  2RD5 A;  3D40 A;  2J5V A;  3KZF A;  3WWM A;  3QUR A;  2BNE A;  3ZZG A;  1E19 A;  3QVF A;  3D41 A;  3QUO A;  1GSJ A;  3B8G A;  3U6U A;  3LKK A;  3L86 A;  3S6K A;  3K56 A;  4JZ8 A;  1B7B A;  2X2W A;  4OLC A;  2BUF A;  4AXS A;  2BTY A;  2JI5 A;  2IJ9 A;  4A7W A;  4Q1T A;  4NDP B;  4NDP A;  2J4L A;  3K52 A;  2J0X A;  3K4Y A;  2VA1 A;  2BMU A;  2R98 A;  2V4Y A;  3S6G A;  1Z9D A;  3NWY A;  2JJ4 A;  3EK6 A;  2CDQ A;  2J4K A;  4USJ A;  1OHB A;  2AKO A;  3K4O A;  3TVI A;  2WE4 A;  1OH9 A;  2W21 A; 
#chains in the Genus database with same CATH homology
 2A1F A;  2WXB A;  2J4J A;  3AAW A;  3C20 A;  4I49 A;  3ZZH A;  2J5T A;  1YBD A;  3C1N A;  4F6T B;  4F6T A;  3S6H A;  4NDQ B;  4NDQ A;  3C1M A;  4NDR B;  2WE5 A;  4NDR A;  3T7B A;  4NDO B;  3AB2 A;  4NDO A;  4A7X A;  4JZ9 A;  2HMF A;  2AP9 A;  2BRX A;  3WWN A;  1OHA A;  3LL9 A;  3D2P A;  3D2M A;  3LL5 A;  4JZ7 A;  2R8V A;  2V5H A;  3ZZF A;  4AB7 A;  2E9Y A;  2J0W A;  2BRI A;  2BND A;  3AB4 A;  3QUN A;  3EK5 A;  3ZZI A;  3L76 A;  2BNF A;  1GS5 A;  2JJX A;  2OGX B;  3QVH A;  4KZT A;  2OGX A;  2RD5 A;  3D40 A;  2J5V A;  3KZF A;  3WWM A;  3QUR A;  2BNE A;  3ZZG A;  1E19 A;  3QVF A;  3D41 A;  3QUO A;  1GSJ A;  3B8G A;  3U6U A;  3LKK A;  3L86 A;  3S6K A;  3K56 A;  4JZ8 A;  1B7B A;  2X2W A;  4OLC A;  2BUF A;  4AXS A;  2BTY A;  2JI5 A;  2IJ9 A;  4A7W A;  4Q1T A;  4NDP B;  4NDP A;  2J4L A;  3K52 A;  2J0X A;  3K4Y A;  2VA1 A;  2BMU A;  2R98 A;  2V4Y A;  3S6G A;  1Z9D A;  3NWY A;  2JJ4 A;  3EK6 A;  2CDQ A;  2J4K A;  4USJ A;  1OHB A;  2AKO A;  3K4O A;  3TVI A;  2WE4 A;  1OH9 A;  2W21 A;
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...
How to cite