1XJH | Genus

Total Genus 16

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	16
sequence length	62
structure length	62
Chain Sequence	MDVEFKCTCSRERCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMDIAEIRNNAS

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Chaperone
source organism	Escherichia coli
publication title	The Zinc-dependent Redox Switch Domain of the Chaperone Hsp33 has a Novel Fold pubmed doi rcsb
molecule keywords	33 kDa chaperonin
total genus	16
structure length	62
sequence length	62
ec nomenclature
pdb deposition date	2004-09-23

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.90.1280.10	Alpha Beta	Alpha-Beta Complex	CBS domain Like	HSP33 redox switch-like	1xjhA00

1XJHA 1VZYA 1VQ0A
chains in the Genus database with same CATH superfamily

3JTFA 3OI8A 1VZYA 3NQRA 2J9LA 1XJHA 1VQ0A 1VR9A 3LFRA 3GHDA 2JA3A
chains in the Genus database with same CATH topology

1XJHA 1VZYA 1VQ0A
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1XJH A;  1VZY A;  1VQ0 A; 
#chains in the Genus database with same CATH topology
 3JTF A;  3OI8 A;  1VZY A;  3NQR A;  2J9L A;  1XJH A;  1VQ0 A;  1VR9 A;  3LFR A;  3GHD A;  2JA3 A; 
#chains in the Genus database with same CATH homology
 1XJH A;  1VZY A;  1VQ0 A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

1XJHA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN