The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
22
|
sequence length |
120
|
structure length |
120
|
Chain Sequence |
FAKLVRPPVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPKMAASLLNPYVKRSVKVKSLSDMTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTV
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule tags |
Hydrolase
|
| molecule keywords |
ATP SYNTHASE OLIGOMYCIN SENSITIVITY CONFERRAL PROTEIN
|
| publication title |
Structure of the F1-binding domain of the stator of bovine F1Fo-ATPase and how it binds an alpha-subunit.
pubmed doi rcsb |
| source organism |
Bos taurus
|
| total genus |
22
|
| structure length |
120
|
| sequence length |
120
|
| ec nomenclature |
ec
3.6.3.14: Transferred entry: 7.1.2.2. |
| pdb deposition date | 2005-04-07 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Orthogonal Bundle | Peroxidase; domain 1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
#chains in the Genus database with same CATH superfamily 1ABV A; 2JMX A; 2A7U B; 2BO5 A; 2WSS S; #chains in the Genus database with same CATH topology 2W23 A; 5SX1 A; 5H9F B; 5SYW A; 5SW5 A; 4JPU A; 5KQ6 A; 1ZBY A; 5SXT A; 1KXN A; 1BGP A; 3M2D A; 1AEG A; 1GWO A; 2VKA A; 4CZP A; 1BEQ A; 1IYN A; 2ANZ A; 3R99 A; 2JTI A; 4BLY A; 3VLI A; 5L05 A; 1CCA A; 4JMZ A; 1GWU A; 1H5A A; 4GED A; 3M26 A; 1SBM A; 4XV8 A; 1CCG A; 1ML2 A; 1SJ2 A; 5SXR A; 1DSO A; 2GB8 A; 4C50 A; 2ATJ A; 1AEN A; 3M29 A; 4A7M A; 2PCC A; 5CCP A; 4JMT A; 4NVM B; 5AL9 A; 2ICV A; 5KQK A; 3RRW A; 2AS6 A; 4BM3 A; 5JHX A; 2ZCA A; 4XV7 A; 1ARX A; 5H9E B; 2B10 A; 6ATJ A; 2RBU X; 1B80 A; 2Y5A A; 2RBW X; 3M2F A; 5CIE A; 3FKG A; 3M25 A; 4PAE A; 3X16 A; 5SYK A; 3VLM A; 1AET A; 5ABQ A; 5SXW A; 2BOQ A; 1U74 A; 4BM4 A; 3R98 A; 2XI6 A; 3UW8 A; 5SX6 A; 3WA8 A; 1OAF A; 4CZQ A; 4C51 A; 4NVO B; 3M28 A; 5SXX A; 2VCF X; 1AEB A; 2YCG A; 2GHD X; 1CPD A; 1GW2 A; 1AEM A; 2XJ6 A; 1EBE A; 4FCS A; 1BEM A; 5KSF A; 4NVJ B; 1JCI A; 2VCN A; 5KQ3 A; 1CK6 A; 4JM8 A; 5JHZ A; 2OEB A; 5JPR A; 4NFG A; 2EUP A; 4H79 A; 4JMB A; 4A5G A; 2AS4 A; 2RC0 X; 5AOG A; 5FNE A; 1AEU A; 1APX A; 1BEK A; 1LLP A; 2IA8 A; 1W4Y A; 2B12 A; 3RIV A; 1LYK A; 5SW4 A; 3M2C A; 2GGN X; 4CVJ A; 1UB2 A; 2CEP A; 2GHE X; 4CVI A; 2CCD A; 1H5K A; 1AEF A; 3VLJ A; 1GWT A; 1H5G A; 5SX0 B; 4P4Q A; 4NVK B; 1MNP A; 2B0Z A; 1ATJ A; 4NVA A; 1RYC A; 4JM6 A; 1CPG A; 1ITK A; 1V0H X; 4CUO A; 5CIC A; 1SCH A; 1AES A; 2ZOP A; 2EUO A; 4NVL A; 1ARY A; 3M8M A; 2PCB A; 5KQ2 A; 1GX2 A; 1PA2 A; 3WNU A; 5CJH A; 2JMX A; 5L86 A; 1AC8 A; 4USC A; 5CD4 J; 1U75 A; 2V2E A; 4NVI B; 2VNX X; 1KZM A; 2X07 A; 3E2O A; 1CCI A; 3M23 A; 5CID A; 3ZCG A; 1U2J A; 4CZR A; 4BM2 A; 1B82 A; 4NVH B; 6CCP A; 4JMV A; 4JM5 A; 3E2N A; 2V23 A; 2AS3 A; 5AMM A; 4JMS A; 1SDQ A; 1H5D A; 1QGJ A; 2XIH A; 2Y6A A; 2GHC X; 4A78 A; 1U2K A; 1STQ A; 4JQJ A; 4BLX A; 1CCK A; 4BLK A; 1BES A; 4NVF A; 2BO5 A; 1DJ1 A; 2EUR A; 2RBT X; 1BEJ A; 4XV5 A; 4XV6 A; 1ARU A; 4JZA A; 1AA4 A; 1AEO A; 1AC4 A; 3WXO A; 5SXQ A; 1QPA A; 2GHH X; 1ARP A; 1YZR A; 1AED A; 1H3J A; 3M5Q A; 4JMA A; 5CIF A; 2B11 A; 5SYU A; 4FEF A; 2N18 A; 1AEJ A; 4OQ7 A; 1H5J A; 1CCL A; 2EUT A; 4FDQ A; 5EJX A; 4GKF A; 2CCA A; 3M2I A; 1BVA A; 4CCX A; 1BJ9 A; 2Y6B A; 1JDR A; 1CMP A; 2RC2 X; 2VCS A; 5SX3 A; 1H5I A; 1CMU A; 3M2H A; 1AEH A; 3Q3U A; 1H58 A; 1KXM A; 5SYY A; 7CCP A; 1S6V A; 2EUU A; 1DJ5 A; 1MKQ A; 2A7U B; 1QO4 A; 1CMQ A; 2AQD A; 1ZBZ A; 1ARW A; 4JPL A; 5SYI A; 1LYC A; 2CL4 X; 3M2A A; 1H5L A; 1CCE A; 5SYL A; 4BLN A; 1W4W A; 2XJ8 A; 4G05 A; 4A6Z A; 4A71 A; 2E39 A; 4H7A A; 2EUQ A; 1CMT A; 5SYJ A; 4BM0 A; 2AS1 A; 2CCP A; 5SX2 A; 1DS4 A; 2EUS A; 2RBZ X; 2VNZ X; 2RC1 X; 3CCX A; 2YLJ A; 1CCJ A; 1MK8 A; 5L02 A; 4JMW A; 1DSP A; 4JM9 A; 2E3B A; 4CZO A; 5FNB A; 1MN2 A; 1CYF A; 4NVN B; 5SXS A; 3ZCH A; 1AEQ A; 5ABN A; 1CCC A; 1KRJ A; 1C8I A; 3VLL A; 1ABV A; 1H5F A; 4XVA A; 1A2G A; 1FHF A; 2RBX X; 3UT2 A; 5CIH A; 1H55 A; 4BLZ A; 4U7U B; 3RIW A; 1LY8 A; 5ABO A; 1H5E A; 3M2B A; 3ATJ A; 2WSS S; 2X08 A; 2RBV X; 2BCN A; 1SOG A; 1B85 A; 4NVC A; 5SW6 A; 3ZCY A; 4CCP A; 1YZP A; 4JQK A; 1A2F A; 2GHK X; 5SYX A; 1DCC A; 5JQR A; 1YYD A; 1HCH A; 1YYG A; 5EJT A; 3FJW A; 1CCB A; 5KSK A; 1GZA A; 2E3A A; 1U2L A; 1KOK A; 4JQM A; 1BEP A; 1OAG A; 1H57 A; 4NVB A; 1Z53 A; 5SX0 A; 2XIL A; 4NVE A; 1LY9 A; 7ATJ A; 1DSE A; 1H5C A; 4JB4 A; 3CCP A; 5KQ0 A; 5ALA A; 5SYV A; 5KQI A; 4BM1 A; 5CIB A; 4NVG B; 3X1L F; 1MKR A; 1AEK A; 2VO2 X; 2XJ5 A; 3FM1 A; 4JPT A; 5SX7 A; 5SYH A; 3FM6 A; 2RBY X; 1CPE A; 3M27 A; 4BLL A; 4JN0 A; 1MN1 A; 2XIF A; 5D6M A; 1CPF A; 5JHY A; 1AEV A; 4ATJ A; 4FCN A; 1HSR A; 1S73 A; 2AS2 A; 4CZN A; 4QYZ B; 3EXB A; 4JQN A; 1H5H A; 3M2E A; 5KQH A; 1DSG A; 1ARV A; 1CCP A; 3HDL A; 1GZB A; 2WD4 A; 3VLK A; 1LGA A; 5CIG A; 4XV4 A; 3FM4 A; 1H5M A; 4NVD A; 3M2G A; 3VLH A; 2EUN A; 1AEE A; 3FMU A; 2CYP A; #chains in the Genus database with same CATH homology 1ABV A; 2JMX A; 2A7U B; 2BO5 A; 2WSS S;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
