4V1ZA

The 3-d structure of the cellobiohydrolase, cel7a, from aspergillus fumigatus
Total Genus 127
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
127
sequence length
440
structure length
440
Chain Sequence
EQVGTSQAEVHPSMTWQSCTAGGSCTTNNGKVVIDANWRWVHKVGDYTNCYTGNTWDTTICPDDATCASNCALEGANYESTYGVTASGNSLRLNFVTTSQQKNIGSRLYMMKDDSTYEMFKLLNQEFTFDVDVSNLPCGLNGALYFVAMDADGGMSKYPTNKAGAKYGTGYCDSQCPRDLKFINGQANVEGWQPSSNDANAGTGNHGSCCAEMDIWEANSISTAFTPHPCDTPGQVMCTGDACGGTYSSDRYGGTCDPDGCDFNSFRQGNKTFYGPGMTVDTKSKFTVVTQFITDDGTSSGTLKEIKRFYVQNGKVIPNSESTWTGVSGNSITTEYCTAQKSLFQDQNVFEKHGGLEGMGAALAQGMVLVMSLWDDHSANMLWLDSNYPTTASSTTPGVARGTCDISSGVPADVEANHPDAYVVYSNIKVGPIGSTFNSG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
molecule tags Hydrolase
molecule keywords CELLOBIOHYDROLASE
publication title The Three-Dimensional Structure of the Cellobiohydrolase Cel7A from Aspergillus Fumigatus at 1.5 A Resolution
pubmed doi rcsb
source organism Aspergillus fumigatus
total genus 127
structure length 440
sequence length 440
ec nomenclature ec 3.2.1.91: Cellulose 1,4-beta-cellobiosidase (non-reducing end).
pdb deposition date 2014-10-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00840 Glyco_hydro_7 Glycosyl hydrolase family 7
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.100.10 Mainly Beta Distorted Sandwich 1,4-Beta-D-Glucan Cellobiohydrolase I; Chain A Glycoside hydrolase, family 7, domain 4v1zA00
3PFZA 3PFXA 4CSIA 1Q2EA 2V3RA 4OVWA 1DY4A 1Z3TA 3PL3A 4IPMA 1Z3VA 4GWAA 4P1HA 4ZZWA 4D5QA 4ZZQA 4D5PA 1Q9HA 6CELA 4ZZPA 1H46X 4HAQA 1EGNA 2OVWA 1DYMA 1OJJA 4ZZVA 4D5IA 4CELA 2RFYA 2RFWA 2YOKA 4V1ZA 2Y9NA 4C4DA 4C4CA 2RFZA 3CELA 1EG1A 4UWTA 3OVWA 1OVWA 2XSPA 4XEBA 5CELA 4P1JA 4ZZTA 4XNNA 1OJIA 4D5VA 2A39A 4HAPA 1A39A 4V20A 4D5JA 3PFJA 1Z3WA 1CELA 4ZZUA 1GPIA 2CELA 2RG0A 4D5OA 5AMPA 7CELA 2YG1A 1Q2BA 2V3IA 1OJKA 4V0ZA
chains in the Genus database with same CATH superfamily
3PFZA 3PFXA 4CSIA 1Q2EA 2V3RA 4OVWA 1DY4A 1Z3TA 3PL3A 4IPMA 1Z3VA 4GWAA 4P1HA 4ZZWA 4D5QA 4ZZQA 4D5PA 1Q9HA 6CELA 4ZZPA 1H46X 4HAQA 1EGNA 2OVWA 1DYMA 1OJJA 4ZZVA 4D5IA 4CELA 2RFYA 2RFWA 2YOKA 4V1ZA 2Y9NA 4C4DA 4C4CA 2RFZA 3CELA 1EG1A 4UWTA 3OVWA 1OVWA 2XSPA 4XEBA 5CELA 4P1JA 4ZZTA 4XNNA 1OJIA 4D5VA 2A39A 4HAPA 1A39A 4V20A 4D5JA 3PFJA 1Z3WA 1CELA 4ZZUA 1GPIA 2CELA 2RG0A 4D5OA 5AMPA 7CELA 2YG1A 1Q2BA 2V3IA 1OJKA 4V0ZA
chains in the Genus database with same CATH topology
3PFZA 3PFXA 4CSIA 1Q2EA 2V3RA 4OVWA 1DY4A 1Z3TA 3PL3A 4IPMA 1Z3VA 4GWAA 4P1HA 4ZZWA 4D5QA 4ZZQA 4D5PA 1Q9HA 6CELA 4ZZPA 1H46X 4HAQA 1EGNA 2OVWA 1DYMA 1OJJA 4ZZVA 4D5IA 4CELA 2RFYA 2RFWA 2YOKA 4V1ZA 2Y9NA 4C4DA 4C4CA 2RFZA 3CELA 1EG1A 4UWTA 3OVWA 1OVWA 2XSPA 4XEBA 5CELA 4P1JA 4ZZTA 4XNNA 1OJIA 4D5VA 2A39A 4HAPA 1A39A 4V20A 4D5JA 3PFJA 1Z3WA 1CELA 4ZZUA 1GPIA 2CELA 2RG0A 4D5OA 5AMPA 7CELA 2YG1A 1Q2BA 2V3IA 1OJKA 4V0ZA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 3PFZ A;  3PFX A;  4CSI A;  1Q2E A;  2V3R A;  4OVW A;  1DY4 A;  1Z3T A;  3PL3 A;  4IPM A;  1Z3V A;  4GWA A;  4P1H A;  4ZZW A;  4D5Q A;  4ZZQ A;  4D5P A;  1Q9H A;  6CEL A;  4ZZP A;  1H46 X;  4HAQ A;  1EGN A;  2OVW A;  1DYM A;  1OJJ A;  4ZZV A;  4D5I A;  4CEL A;  2RFY A;  2RFW A;  2YOK A;  4V1Z A;  2Y9N A;  4C4D A;  4C4C A;  2RFZ A;  3CEL A;  1EG1 A;  4UWT A;  3OVW A;  1OVW A;  2XSP A;  4XEB A;  5CEL A;  4P1J A;  4ZZT A;  4XNN A;  1OJI A;  4D5V A;  2A39 A;  4HAP A;  1A39 A;  4V20 A;  4D5J A;  3PFJ A;  1Z3W A;  1CEL A;  4ZZU A;  1GPI A;  2CEL A;  2RG0 A;  4D5O A;  5AMP A;  7CEL A;  2YG1 A;  1Q2B A;  2V3I A;  1OJK A;  4V0Z A; 
#chains in the Genus database with same CATH topology
 3PFZ A;  3PFX A;  4CSI A;  1Q2E A;  2V3R A;  4OVW A;  1DY4 A;  1Z3T A;  3PL3 A;  4IPM A;  1Z3V A;  4GWA A;  4P1H A;  4ZZW A;  4D5Q A;  4ZZQ A;  4D5P A;  1Q9H A;  6CEL A;  4ZZP A;  1H46 X;  4HAQ A;  1EGN A;  2OVW A;  1DYM A;  1OJJ A;  4ZZV A;  4D5I A;  4CEL A;  2RFY A;  2RFW A;  2YOK A;  4V1Z A;  2Y9N A;  4C4D A;  4C4C A;  2RFZ A;  3CEL A;  1EG1 A;  4UWT A;  3OVW A;  1OVW A;  2XSP A;  4XEB A;  5CEL A;  4P1J A;  4ZZT A;  4XNN A;  1OJI A;  4D5V A;  2A39 A;  4HAP A;  1A39 A;  4V20 A;  4D5J A;  3PFJ A;  1Z3W A;  1CEL A;  4ZZU A;  1GPI A;  2CEL A;  2RG0 A;  4D5O A;  5AMP A;  7CEL A;  2YG1 A;  1Q2B A;  2V3I A;  1OJK A;  4V0Z A; 
#chains in the Genus database with same CATH homology
 3PFZ A;  3PFX A;  4CSI A;  1Q2E A;  2V3R A;  4OVW A;  1DY4 A;  1Z3T A;  3PL3 A;  4IPM A;  1Z3V A;  4GWA A;  4P1H A;  4ZZW A;  4D5Q A;  4ZZQ A;  4D5P A;  1Q9H A;  6CEL A;  4ZZP A;  1H46 X;  4HAQ A;  1EGN A;  2OVW A;  1DYM A;  1OJJ A;  4ZZV A;  4D5I A;  4CEL A;  2RFY A;  2RFW A;  2YOK A;  4V1Z A;  2Y9N A;  4C4D A;  4C4C A;  2RFZ A;  3CEL A;  1EG1 A;  4UWT A;  3OVW A;  1OVW A;  2XSP A;  4XEB A;  5CEL A;  4P1J A;  4ZZT A;  4XNN A;  1OJI A;  4D5V A;  2A39 A;  4HAP A;  1A39 A;  4V20 A;  4D5J A;  3PFJ A;  1Z3W A;  1CEL A;  4ZZU A;  1GPI A;  2CEL A;  2RG0 A;  4D5O A;  5AMP A;  7CEL A;  2YG1 A;  1Q2B A;  2V3I A;  1OJK A;  4V0Z A;
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...
How to cite