1AB7A

Nmr 15n relaxation and structural studies reveal conformational exchange in barstar c40/82a, 30 structures
Total Genus 18
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
89
structure length
89
Chain Sequence
b'KKAVINGEQIRSISDLHQTLKKELALPEYYGENLDALWDALTGWVEYPLVLEWRQFEQSKQLTENGAESVLQVFREAKAEGADITIILS'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords BARSTAR
publication title NMR 15N relaxation and structural studies reveal slow conformational exchange in barstar C40/82A.
pubmed doi rcsb
source organism Bacillus amyloliquefaciens
molecule tags Ribonuclease inhibitor
total genus 18
structure length 89
sequence length 89
ec nomenclature
pdb deposition date 1997-02-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01337 Barstar Barstar (barnase inhibitor)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.370.10 Alpha Beta 2-Layer Sandwich Barnase; Chain D Barstar-like 1ab7A00
3DA7C 1AY7B 1B2UD 1BGSE 2HXXA 1X1WD 2CX6A 1AB7A 1X1XD 1B27D 1BTBA 1A19A 1BTAA 1X1YD 1B2SD 5F4CA 1X1UD 1B3SD 1BRSD 2ZA4B
chains in the Genus database with same CATH superfamily
3DA7C 1AY7B 1B2UD 1BGSE 2HXXA 1X1WD 2CX6A 2YK4A 2YK5A 1AB7A 1X1XD 1B27D 1BTBA 1A19A 1BTAA 1X1YD 1B2SD 5F4CA 1X1UD 2YK7A 1B3SD 1BRSD 2ZA4B 2YK6A
chains in the Genus database with same CATH topology
3DA7C 1AY7B 1B2UD 1BGSE 2HXXA 1X1WD 2CX6A 1AB7A 1X1XD 1B27D 1BTBA 1A19A 1BTAA 1X1YD 1B2SD 5F4CA 1X1UD 1B3SD 1BRSD 2ZA4B
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3DA7 C;  1AY7 B;  1B2U D;  1BGS E;  2HXX A;  1X1W D;  2CX6 A;  1AB7 A;  1X1X D;  1B27 D;  1BTB A;  1A19 A;  1BTA A;  1X1Y D;  1B2S D;  5F4C A;  1X1U D;  1B3S D;  1BRS D;  2ZA4 B; 
#chains in the Genus database with same CATH topology
 3DA7 C;  1AY7 B;  1B2U D;  1BGS E;  2HXX A;  1X1W D;  2CX6 A;  2YK4 A;  2YK5 A;  1AB7 A;  1X1X D;  1B27 D;  1BTB A;  1A19 A;  1BTA A;  1X1Y D;  1B2S D;  5F4C A;  1X1U D;  2YK7 A;  1B3S D;  1BRS D;  2ZA4 B;  2YK6 A; 
#chains in the Genus database with same CATH homology
 3DA7 C;  1AY7 B;  1B2U D;  1BGS E;  2HXX A;  1X1W D;  2CX6 A;  1AB7 A;  1X1X D;  1B27 D;  1BTB A;  1A19 A;  1BTA A;  1X1Y D;  1B2S D;  5F4C A;  1X1U D;  1B3S D;  1BRS D;  2ZA4 B; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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