3HFIA

The crystal structure of the putative regulator from escherichia coli cft073
Total Genus 28
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
137
structure length
137
Chain Sequence
TTEVITSRIEPANRYVAEKLRITPGQDILYLERLRSIGDEKAMLIENRINIELCPGIVEIDFNQHNLFPTIESLSKRKIRYSESRYAARLIGNERGHFLDISEDAPVLHLEQLVFFSRELPVEFGNVWLKGNKYYLG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The crystal structure of the putative regulator from Escherichia coli CFT073
rcsb
molecule tags Structural genomics, unknown function
source organism Escherichia coli o6
molecule keywords Putative regulator
total genus 28
structure length 137
sequence length 137
ec nomenclature
pdb deposition date 2009-05-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07702 UTRA UTRA domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.1410.10 Alpha Beta 3-Layer(aba) Sandwich Chorismate lyase Chorismate lyase-like 3hfiA00
1G81A 2FA1A 3L5ZA 1XLRA 1G1BA 2P19A 2PKHA 2OOIA 3EETA 2IKKA 3F8LA 4U0WA 4ZSBA 2RA5A 3LHEA 4U0VA 1JD3A 1TT8A 2AHCA 3F8MA 3CNVA 2OGGA 4ZSKA 3HFIA 2WV0A 3EDPA 3DDVA 4WWCA 1FW9A 2NWIA 3BWGA 4ZSIA
chains in the Genus database with same CATH superfamily
1G81A 2FA1A 3L5ZA 1XLRA 1G1BA 2P19A 2PKHA 2OOIA 3EETA 2IKKA 3F8LA 4U0WA 4ZSBA 2RA5A 3LHEA 4U0VA 1JD3A 1TT8A 2AHCA 3F8MA 3CNVA 2OGGA 4ZSKA 3HFIA 2WV0A 3EDPA 3DDVA 4WWCA 1FW9A 2NWIA 3BWGA 4ZSIA
chains in the Genus database with same CATH topology
1G81A 2FA1A 3L5ZA 1XLRA 1G1BA 2P19A 2PKHA 2OOIA 3EETA 2IKKA 3F8LA 4U0WA 4ZSBA 2RA5A 3LHEA 4U0VA 1JD3A 1TT8A 2AHCA 3F8MA 3CNVA 2OGGA 4ZSKA 3HFIA 2WV0A 3EDPA 3DDVA 4WWCA 1FW9A 2NWIA 3BWGA 4ZSIA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1G81 A;  2FA1 A;  3L5Z A;  1XLR A;  1G1B A;  2P19 A;  2PKH A;  2OOI A;  3EET A;  2IKK A;  3F8L A;  4U0W A;  4ZSB A;  2RA5 A;  3LHE A;  4U0V A;  1JD3 A;  1TT8 A;  2AHC A;  3F8M A;  3CNV A;  2OGG A;  4ZSK A;  3HFI A;  2WV0 A;  3EDP A;  3DDV A;  4WWC A;  1FW9 A;  2NWI A;  3BWG A;  4ZSI A; 
#chains in the Genus database with same CATH topology
 1G81 A;  2FA1 A;  3L5Z A;  1XLR A;  1G1B A;  2P19 A;  2PKH A;  2OOI A;  3EET A;  2IKK A;  3F8L A;  4U0W A;  4ZSB A;  2RA5 A;  3LHE A;  4U0V A;  1JD3 A;  1TT8 A;  2AHC A;  3F8M A;  3CNV A;  2OGG A;  4ZSK A;  3HFI A;  2WV0 A;  3EDP A;  3DDV A;  4WWC A;  1FW9 A;  2NWI A;  3BWG A;  4ZSI A; 
#chains in the Genus database with same CATH homology
 1G81 A;  2FA1 A;  3L5Z A;  1XLR A;  1G1B A;  2P19 A;  2PKH A;  2OOI A;  3EET A;  2IKK A;  3F8L A;  4U0W A;  4ZSB A;  2RA5 A;  3LHE A;  4U0V A;  1JD3 A;  1TT8 A;  2AHC A;  3F8M A;  3CNV A;  2OGG A;  4ZSK A;  3HFI A;  2WV0 A;  3EDP A;  3DDV A;  4WWC A;  1FW9 A;  2NWI A;  3BWG A;  4ZSI A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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