3EZBB

Complex of the amino terminal domain of enzyme i and the histidine-containing phosphocarrier protein hpr from escherichia coli
Total Genus 18

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
85
structure length
85
Chain Sequence
MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
molecule tags Transferase
source organism Escherichia coli
publication title Solution structure of the 40,000 Mr phosphoryl transfer complex between the N-terminal domain of enzyme I and HPr.
pubmed doi rcsb
molecule keywords PROTEIN (PHOSPHOTRANSFER SYSTEM, ENZYME I)
total genus 18
structure length 85
sequence length 85
ec nomenclature
pdb deposition date 1998-11-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00381 PTS-HPr PTS HPr component phosphorylation site
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.1340.10 Alpha Beta 2-Layer Sandwich Histidine-containing Protein; Chain: A; HPr-like 3ezbB00
1SPHA 2LRKD 2HPRA 1CM3A 3LE1A 1MO1B 1QFRA 2RLZA 3LNWA 3EZEB 1Y4YA 3LFGA 1KKMH 1PCHA 2JELP 1PTFA 1VRCC 3EZBB 3EZAB 1J6TB 1QR5A 2HIDA 2LRLD 2NZVL 3OQOD 1RZRL 1HDNA 1TXEA 3LE5A 1K1CA 1JEMA 1Y51A 4XWJB 2NZUL 1FU0A 1MO1A 1CM2A 1KKLH 5T1OA 1Y50A 1MU4A 3OQMD 1ZVVJ 1GGRB 1KA5A 1PFHA 3CCDA 2FEPS 3OQND 1POHA 2OENL 3LE3A 2AK7A 1OPDA 2XDFC 3IHSA 5T1NA 5T17A
chains in the Genus database with same CATH superfamily
1SPHA 2LRKD 2HPRA 1CM3A 3LE1A 1MO1B 1QFRA 2RLZA 3LNWA 3EZEB 1Y4YA 3LFGA 1KKMH 1PCHA 2JELP 1PTFA 1VRCC 3EZBB 3EZAB 1J6TB 1QR5A 2HIDA 2LRLD 2NZVL 3OQOD 1RZRL 1HDNA 1TXEA 3LE5A 1K1CA 1JEMA 1Y51A 4XWJB 2NZUL 1FU0A 1CM2A 1KKLH 1MO1A 1J5YA 1Y50A 5T1OA 1MU4A 3OQMD 1ZVVJ 1GGRB 1KA5A 1PFHA 3CCDA 2FEPS 3OQND 1POHA 2OENL 3LE3A 2AK7A 1OPDA 2XDFC 3IHSA 5T1NA 5T17A
chains in the Genus database with same CATH topology
1SPHA 2LRKD 2HPRA 1CM3A 3LE1A 1MO1B 1QFRA 2RLZA 3LNWA 3EZEB 1Y4YA 3LFGA 1KKMH 1PCHA 2JELP 1PTFA 1VRCC 3EZBB 3EZAB 1J6TB 1QR5A 2HIDA 2LRLD 2NZVL 3OQOD 1RZRL 1HDNA 1TXEA 3LE5A 1K1CA 1JEMA 1Y51A 4XWJB 2NZUL 1FU0A 1MO1A 1CM2A 1KKLH 5T1OA 1Y50A 1MU4A 3OQMD 1ZVVJ 1GGRB 1KA5A 1PFHA 3CCDA 2FEPS 3OQND 1POHA 2OENL 3LE3A 2AK7A 1OPDA 2XDFC 3IHSA 5T1NA 5T17A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1SPH A;  2LRK D;  2HPR A;  1CM3 A;  3LE1 A;  1MO1 B;  1QFR A;  2RLZ A;  3LNW A;  3EZE B;  1Y4Y A;  3LFG A;  1KKM H;  1PCH A;  2JEL P;  1PTF A;  1VRC C;  3EZB B;  3EZA B;  1J6T B;  1QR5 A;  2HID A;  2LRL D;  2NZV L;  3OQO D;  1RZR L;  1HDN A;  1TXE A;  3LE5 A;  1K1C A;  1JEM A;  1Y51 A;  4XWJ B;  2NZU L;  1FU0 A;  1MO1 A;  1CM2 A;  1KKL H;  5T1O A;  1Y50 A;  1MU4 A;  3OQM D;  1ZVV J;  1GGR B;  1KA5 A;  1PFH A;  3CCD A;  2FEP S;  3OQN D;  1POH A;  2OEN L;  3LE3 A;  2AK7 A;  1OPD A;  2XDF C;  3IHS A;  5T1N A;  5T17 A; 
#chains in the Genus database with same CATH topology
 1SPH A;  2LRK D;  2HPR A;  1CM3 A;  3LE1 A;  1MO1 B;  1QFR A;  2RLZ A;  3LNW A;  3EZE B;  1Y4Y A;  3LFG A;  1KKM H;  1PCH A;  2JEL P;  1PTF A;  1VRC C;  3EZB B;  3EZA B;  1J6T B;  1QR5 A;  2HID A;  2LRL D;  2NZV L;  3OQO D;  1RZR L;  1HDN A;  1TXE A;  3LE5 A;  1K1C A;  1JEM A;  1Y51 A;  4XWJ B;  2NZU L;  1FU0 A;  1CM2 A;  1KKL H;  1MO1 A;  1J5Y A;  1Y50 A;  5T1O A;  1MU4 A;  3OQM D;  1ZVV J;  1GGR B;  1KA5 A;  1PFH A;  3CCD A;  2FEP S;  3OQN D;  1POH A;  2OEN L;  3LE3 A;  2AK7 A;  1OPD A;  2XDF C;  3IHS A;  5T1N A;  5T17 A; 
#chains in the Genus database with same CATH homology
 1SPH A;  2LRK D;  2HPR A;  1CM3 A;  3LE1 A;  1MO1 B;  1QFR A;  2RLZ A;  3LNW A;  3EZE B;  1Y4Y A;  3LFG A;  1KKM H;  1PCH A;  2JEL P;  1PTF A;  1VRC C;  3EZB B;  3EZA B;  1J6T B;  1QR5 A;  2HID A;  2LRL D;  2NZV L;  3OQO D;  1RZR L;  1HDN A;  1TXE A;  3LE5 A;  1K1C A;  1JEM A;  1Y51 A;  4XWJ B;  2NZU L;  1FU0 A;  1MO1 A;  1CM2 A;  1KKL H;  5T1O A;  1Y50 A;  1MU4 A;  3OQM D;  1ZVV J;  1GGR B;  1KA5 A;  1PFH A;  3CCD A;  2FEP S;  3OQN D;  1POH A;  2OEN L;  3LE3 A;  2AK7 A;  1OPD A;  2XDF C;  3IHS A;  5T1N A;  5T17 A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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