2O3LA

Crystal structure of a duf1048 protein with a left-handed superhelix fold (bce_3448) from bacillus cereus atcc 10987 at 2.05 a resolution
Total Genus 22
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
22
sequence length
83
structure length
83
Chain Sequence
GEYKMMMARVAALPEDYQFVFKKIQNYMWNFSAGNGMDMLHIQYELIDLFEAGAAEGRQVLDITGEDVASFADELVANAKTYV
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of hypothetical protein (NP_979748.1) from Bacillus cereus ATCC 10987 at 2.05 A resolution
rcsb
molecule tags Unknown function
source organism Bacillus cereus
molecule keywords Hypothetical protein
total genus 22
structure length 83
sequence length 83
chains with identical sequence B
ec nomenclature
pdb deposition date 2006-12-01
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1900.10 Mainly Alpha Orthogonal Bundle c-terminal domain of poly(a) binding protein c-terminal domain of poly(a) binding protein 2o3lA00
3KURA 1JGNA 1I2TA 3KUTA 1G9LA 2RQHB 2O3LA 3NTWA 4IVEA 3KUJA 1JH4A 2O4TA 2X04A 3KUIA 2DYDA 2HH6A 3KTRA 1IFWA 3KUSA 1NMRA 3PTHA 3KTPA 2RQGB 3PKNA
chains in the Genus database with same CATH superfamily
3KURA 1JGNA 1I2TA 2LKLA 3KUTA 1G9LA 2RQHB 2O3LA 3NTWA 4IVEA 3KUJA 1JH4A 2O4TA 2X04A 4KXFB 3KUIA 2DYDA 2HH6A 1GYZA 3KTRA 1IFWA 3KUSA 1NMRA 3PTHA 2GHJA 3KTPA 3M92A 2RQGB 3PKNA
chains in the Genus database with same CATH topology
3KURA 1JGNA 1I2TA 2LKLA 3KUTA 1G9LA 2RQHB 2O3LA 3NTWA 4IVEA 3KUJA 1JH4A 2O4TA 2X04A 4KXFB 3KUIA 2DYDA 2HH6A 3KTRA 1IFWA 3KUSA 1NMRA 3PTHA 3KTPA 3M92A 2RQGB 3PKNA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KUR A;  1JGN A;  1I2T A;  3KUT A;  1G9L A;  2RQH B;  2O3L A;  3NTW A;  4IVE A;  3KUJ A;  1JH4 A;  2O4T A;  2X04 A;  3KUI A;  2DYD A;  2HH6 A;  3KTR A;  1IFW A;  3KUS A;  1NMR A;  3PTH A;  3KTP A;  2RQG B;  3PKN A; 
#chains in the Genus database with same CATH topology
 3KUR A;  1JGN A;  1I2T A;  2LKL A;  3KUT A;  1G9L A;  2RQH B;  2O3L A;  3NTW A;  4IVE A;  3KUJ A;  1JH4 A;  2O4T A;  2X04 A;  4KXF B;  3KUI A;  2DYD A;  2HH6 A;  1GYZ A;  3KTR A;  1IFW A;  3KUS A;  1NMR A;  3PTH A;  2GHJ A;  3KTP A;  3M92 A;  2RQG B;  3PKN A; 
#chains in the Genus database with same CATH homology
 3KUR A;  1JGN A;  1I2T A;  2LKL A;  3KUT A;  1G9L A;  2RQH B;  2O3L A;  3NTW A;  4IVE A;  3KUJ A;  1JH4 A;  2O4T A;  2X04 A;  4KXF B;  3KUI A;  2DYD A;  2HH6 A;  3KTR A;  1IFW A;  3KUS A;  1NMR A;  3PTH A;  3KTP A;  3M92 A;  2RQG B;  3PKN A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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