3CWBI

Chicken cytochrome bc1 complex inhibited by an iodinated analogue of the polyketide crocacin-d
Total Genus 0
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
0
sequence length
51
structure length
51
Chain Sequence
XXXXXXXXXXXXXXXXXXXXRPLLCRESMSGRSARRDLVAGISLNAPASVR

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title The role of molecular modeling in the design of analogues of the fungicidal natural products crocacins A and D.
pubmed doi rcsb
molecule keywords MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE
molecule tags Oxidoreductase
structure length 51
sequence length 51
chains with identical sequence V
ec nomenclature ec 7.1.1.8: Quinol--cytochrome-c reductase.
pdb deposition date 2008-04-21
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.210.10 Mainly Beta Ribbon Cytochrome Bc1 Complex; Chain I Cytochrome Bc1 Complex; Chain I 3cwbI00
1L0LI 2A06I 3H1LI 3L71I 3L70I 3L72I 3CWBI 3L73I 3H1KI 1PPJI 3L74I 3L75I 1NU1I 1NTZI 3TGUI 1NTKI 1L0NI 3H1HI 1SQPI 1PP9I 1NTMI 1SQQI 1SQBI 2FYUI 3H1JI 1SQXI 3H1II 4U3FI 1SQVI
chains in the Genus database with same CATH superfamily
1L0LI 2A06I 3H1LI 3L71I 3L70I 3L72I 3CWBI 3L73I 3H1KI 1PPJI 3L74I 3L75I 1NU1I 1NTZI 3TGUI 1NTKI 1L0NI 3H1HI 1SQPI 1PP9I 1NTMI 1SQQI 1SQBI 2FYUI 3H1JI 1SQXI 3H1II 4U3FI 1SQVI
chains in the Genus database with same CATH topology
1L0LI 2A06I 3H1LI 3L71I 3L70I 3L72I 3CWBI 3L73I 3H1KI 1PPJI 3L74I 3L75I 1NU1I 1NTZI 3TGUI 1NTKI 1L0NI 3H1HI 1SQPI 1PP9I 1NTMI 1SQQI 1SQBI 2FYUI 3H1JI 1SQXI 3H1II 4U3FI 1SQVI
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 1L0L I;  2A06 I;  3H1L I;  3L71 I;  3L70 I;  3L72 I;  3CWB I;  3L73 I;  3H1K I;  1PPJ I;  3L74 I;  3L75 I;  1NU1 I;  1NTZ I;  3TGU I;  1NTK I;  1L0N I;  3H1H I;  1SQP I;  1PP9 I;  1NTM I;  1SQQ I;  1SQB I;  2FYU I;  3H1J I;  1SQX I;  3H1I I;  4U3F I;  1SQV I; 
#chains in the Genus database with same CATH topology
 1L0L I;  2A06 I;  3H1L I;  3L71 I;  3L70 I;  3L72 I;  3CWB I;  3L73 I;  3H1K I;  1PPJ I;  3L74 I;  3L75 I;  1NU1 I;  1NTZ I;  3TGU I;  1NTK I;  1L0N I;  3H1H I;  1SQP I;  1PP9 I;  1NTM I;  1SQQ I;  1SQB I;  2FYU I;  3H1J I;  1SQX I;  3H1I I;  4U3F I;  1SQV I; 
#chains in the Genus database with same CATH homology
 1L0L I;  2A06 I;  3H1L I;  3L71 I;  3L70 I;  3L72 I;  3CWB I;  3L73 I;  3H1K I;  1PPJ I;  3L74 I;  3L75 I;  1NU1 I;  1NTZ I;  3TGU I;  1NTK I;  1L0N I;  3H1H I;  1SQP I;  1PP9 I;  1NTM I;  1SQQ I;  1SQB I;  2FYU I;  3H1J I;  1SQX I;  3H1I I;  4U3F I;  1SQV I;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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