3H1KI

Chicken cytochrome bc1 complex with zn++ and an iodinated derivative of kresoxim-methyl bound
Total Genus 1
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
1
sequence length
46
structure length
46
Chain Sequence
XXXXXXXXXXXXXXXRPLLCRESMSGRSARRDLVAGISLNAPASVR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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publication title Crystallographic location of two Zn(2+)-binding sites in the avian cytochrome bc(1) complex
pubmed rcsb
molecule tags Oxidoreductase
molecule keywords MITOCHONDRIAL UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX CORE
total genus 1
structure length 46
sequence length 46
chains with identical sequence V
ec nomenclature ec 7.1.1.8: Quinol--cytochrome-c reductase.
pdb deposition date 2009-04-12
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.210.10 Mainly Beta Ribbon Cytochrome Bc1 Complex; Chain I Cytochrome Bc1 Complex; Chain I 3h1kI00
3H1LI 3H1HI 1SQBI 1NTMI 1SQVI 3L75I 1NTZI 4U3FI 1SQXI 3L74I 3TGUI 1SQPI 1PP9I 2FYUI 1L0LI 1SQQI 3L73I 1PPJI 1L0NI 1NU1I 3H1II 3CWBI 2A06I 3H1KI 3L72I 3L70I 3L71I 3H1JI 1NTKI
chains in the Genus database with same CATH superfamily
3H1LI 3H1HI 1SQBI 1NTMI 1SQVI 3L75I 1NTZI 4U3FI 1SQXI 3L74I 3TGUI 1SQPI 1PP9I 2FYUI 1L0LI 1SQQI 3L73I 1PPJI 1L0NI 1NU1I 3H1II 3CWBI 2A06I 3H1KI 3L72I 3L70I 3L71I 3H1JI 1NTKI
chains in the Genus database with same CATH topology
3H1LI 3H1HI 1SQBI 1NTMI 1SQVI 3L75I 1NTZI 4U3FI 1SQXI 3L74I 3TGUI 1SQPI 1PP9I 2FYUI 1L0LI 1SQQI 3L73I 1PPJI 1L0NI 1NU1I 3H1II 3CWBI 2A06I 3H1KI 3L72I 3L70I 3L71I 3H1JI 1NTKI
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 3H1L I;  3H1H I;  1SQB I;  1NTM I;  1SQV I;  3L75 I;  1NTZ I;  4U3F I;  1SQX I;  3L74 I;  3TGU I;  1SQP I;  1PP9 I;  2FYU I;  1L0L I;  1SQQ I;  3L73 I;  1PPJ I;  1L0N I;  1NU1 I;  3H1I I;  3CWB I;  2A06 I;  3H1K I;  3L72 I;  3L70 I;  3L71 I;  3H1J I;  1NTK I; 
#chains in the Genus database with same CATH topology
 3H1L I;  3H1H I;  1SQB I;  1NTM I;  1SQV I;  3L75 I;  1NTZ I;  4U3F I;  1SQX I;  3L74 I;  3TGU I;  1SQP I;  1PP9 I;  2FYU I;  1L0L I;  1SQQ I;  3L73 I;  1PPJ I;  1L0N I;  1NU1 I;  3H1I I;  3CWB I;  2A06 I;  3H1K I;  3L72 I;  3L70 I;  3L71 I;  3H1J I;  1NTK I; 
#chains in the Genus database with same CATH homology
 3H1L I;  3H1H I;  1SQB I;  1NTM I;  1SQV I;  3L75 I;  1NTZ I;  4U3F I;  1SQX I;  3L74 I;  3TGU I;  1SQP I;  1PP9 I;  2FYU I;  1L0L I;  1SQQ I;  3L73 I;  1PPJ I;  1L0N I;  1NU1 I;  3H1I I;  3CWB I;  2A06 I;  3H1K I;  3L72 I;  3L70 I;  3L71 I;  3H1J I;  1NTK I;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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