The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
1
|
sequence length |
46
|
structure length |
46
|
Chain Sequence |
XXXXXXXXXXXXXXXRPLLCRESMSGRSARRDLVAGISLNAPASVR
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
Famoxadone and related inhibitors bind like methoxy acrylate inhibitors in the Qo site of the BC1 compl and fix the rieske iron-sulfur protein in a positio close to but distinct from that seen with stigmatellin and other "DISTAL" Qo inhibitors.
rcsb |
| molecule tags |
Oxidoreductase
|
| molecule keywords |
Mitochondrial ubiquinol-cytochrome-c reductase complex core
|
| total genus |
1
|
| structure length |
46
|
| sequence length |
46
|
| chains with identical sequence |
V
|
| ec nomenclature |
ec
7.1.1.8: Quinol--cytochrome-c reductase. |
| pdb deposition date | 2009-12-27 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Beta | Ribbon | Cytochrome Bc1 Complex; Chain I | Cytochrome Bc1 Complex; Chain I |
#chains in the Genus database with same CATH superfamily 3L70 I; 3H1L I; 1PPJ I; 1NTK I; 2A06 I; 1L0L I; 1SQB I; 3L75 I; 3L74 I; 3TGU I; 3L72 I; 1SQQ I; 1SQV I; 2FYU I; 1SQP I; 1PP9 I; 1NU1 I; 1NTZ I; 4U3F I; 3CWB I; 3H1I I; 3H1H I; 3L73 I; 3H1K I; 3L71 I; 1L0N I; 3H1J I; 1NTM I; 1SQX I; #chains in the Genus database with same CATH topology 3L70 I; 3H1L I; 1PPJ I; 1NTK I; 2A06 I; 1L0L I; 1SQB I; 3L75 I; 3L74 I; 3TGU I; 3L72 I; 1SQQ I; 1SQV I; 2FYU I; 1SQP I; 1PP9 I; 1NU1 I; 1NTZ I; 4U3F I; 3CWB I; 3H1I I; 3H1H I; 3L73 I; 3H1K I; 3L71 I; 1L0N I; 3H1J I; 1NTM I; 1SQX I; #chains in the Genus database with same CATH homology 3L70 I; 3H1L I; 1PPJ I; 1NTK I; 2A06 I; 1L0L I; 1SQB I; 3L75 I; 3L74 I; 3TGU I; 3L72 I; 1SQQ I; 1SQV I; 2FYU I; 1SQP I; 1PP9 I; 1NU1 I; 1NTZ I; 4U3F I; 3CWB I; 3H1I I; 3H1H I; 3L73 I; 3H1K I; 3L71 I; 1L0N I; 3H1J I; 1NTM I; 1SQX I;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
