5MPOC

Crystal structure of human molybdopterin synthase complex
Total Genus 38
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
132
structure length
132
Chain Sequence
EEKSKDVINFTAEKLSVDEVSQLVISPLCGAISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWPVKHIAVFHRLGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Molybdopterin synthase sulfur carrier subunit
publication title Crystal structure of human molybdopterin synthase complex
rcsb
source organism Homo sapiens
total genus 38
structure length 132
sequence length 132
chains with identical sequence D
ec nomenclature ec 2.8.1.12: Molybdopterin synthase.
pdb deposition date 2016-12-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02391 MoaE MoaE protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1170.40 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3 Molybdopterin biosynthesis MoaE subunit 5mpoC00
1NVJA 4AP8A 5MPOC 2Q5WE 1NVIE 2QIEA 3BIIE 3RPFA 1FMAE 2OMDA 1FM0E 2WP4A
chains in the Genus database with same CATH superfamily
3WNZA 3CD6H 2QEXH 1KC8J 1N63B 4KWVA 3WO0A 1O4UA 3AMZA 2B7QA 5GAGN 1YTDA 1S72H 3CC2H 3FC4A 4USAA 5GAEN 1FMAE 3NVZC 4UY8M 1VQLH 4WFAJ 3C2FA 1W2BH 1YHQH 1Q81J 1WKIA 3PAJA 3CMEH 1UOUA 1YJNH 5DM7J 4XR5A 3G6EH 3PIPJ 4US9A 3I56H 1Y69K 1M90J 2B7NA 3BIIE 4GA5A 3CCMH 1N5WB 1RM6A 3ETRC 4C7YA 3CXCH 3CPWH 1ZXIB 2JBMA 4GA4A 2TPTA 1VQ5H 1N60B 2W55B 5GAHN 1QVGH 4WF9J 3G71H 3NVVC 2ZJPJ 1QPRA 1K8AJ 1YTEA 1NJIJ 1JJ2H 1DGJA 2ZJRJ 1SIJA 3C2OA 4YEKA 3G4SH 4C7ZA 1VQPH 5JVHJ 2OTLH 3CCUH 3SR6C 1X1OA 5HL7J 3PIOJ 1VQ4H 5AYYA 1N61B 3H5QA 3DLLJ 2WK6A 1QVFH 1QPQA 5EP8A 1V97A 1KQSH 4IOAJ 1WYGA 3AM9A 1YITH 3CCQH 1FO4A 1OTPA 2PA2A 1SB3A 1QAPA 2OMDA 1M1KJ 1VQKH 2W3RB 3C2EA 2OTJH 4C80A 1FFVB 1KD1J 5MLCO 5AN9F 2W54B 3OW2H 3CCLH 4IOCJ 4GA6A 2B7PA 4U67J 3AN1A 3CCJH 1AZYA 5GADN 1N62B 2ZJQJ 5AYZA 5HULA 1Q82J 4I9AA 5MPOC 5DM6J 1NVIE 3CCEH 3J7ZM 4WCEJ 3L0GA 5HUOA 1K9MJ 1VQ7H 3VMMA 1QPNA 1FM0E 3EUB4 3NVYC 4WFNJ 2Q5WE 1YTKA 2W3SB 1YJ9H 3CCVH 4IO9J 1K73J 3NRZC 1VLBA 2WK5A 1VQ6H 1BRWA 4X46A 1FFUB 3CCRH 1JRPB 1VDVA 3C2RA 3FAHA 3I55H 3CF5J 3NVWC 1NVJA 4LHMA 1JROB 2I14A 2I1OA 1FIQC 4EAFA 2QA4H 1YI2H 3GNNA 2WP4A 1Q7YJ 1VQNH 5HUPA 1YJWH 4US8A 3L4PA 1VQMH 5H1SO 3B9JC 3CMAH 1YIJH 4YYYA 1N5XA 3C2VA 3NS1C 1N8RJ 5EY3A 4WFBJ 3WO1A 1VQ8H 1QPOA 2E3TA 4AP8A 1VQ9H 1VQOH 2J0FA 3CCSH 2QIEA 3RPFA 1Q86J 4KWWA 3TQVA 4EADA 3CC7H 5AYXA 4ZOHA 5JVGJ 3CC4H 2DSJA
chains in the Genus database with same CATH topology
1NVJA 4AP8A 5MPOC 2Q5WE 1NVIE 2QIEA 3BIIE 3RPFA 1FMAE 2OMDA 1FM0E 2WP4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1NVJ A;  4AP8 A;  5MPO C;  2Q5W E;  1NVI E;  2QIE A;  3BII E;  3RPF A;  1FMA E;  2OMD A;  1FM0 E;  2WP4 A; 
#chains in the Genus database with same CATH topology
 3WNZ A;  3CD6 H;  2QEX H;  1KC8 J;  1N63 B;  4KWV A;  3WO0 A;  1O4U A;  3AMZ A;  2B7Q A;  5GAG N;  1YTD A;  1S72 H;  3CC2 H;  3FC4 A;  4USA A;  5GAE N;  1FMA E;  3NVZ C;  4UY8 M;  1VQL H;  4WFA J;  3C2F A;  1W2B H;  1YHQ H;  1Q81 J;  1WKI A;  3PAJ A;  3CME H;  1UOU A;  1YJN H;  5DM7 J;  4XR5 A;  3G6E H;  3PIP J;  4US9 A;  3I56 H;  1Y69 K;  1M90 J;  2B7N A;  3BII E;  4GA5 A;  3CCM H;  1N5W B;  1RM6 A;  3ETR C;  4C7Y A;  3CXC H;  3CPW H;  1ZXI B;  2JBM A;  4GA4 A;  2TPT A;  1VQ5 H;  1N60 B;  2W55 B;  5GAH N;  1QVG H;  4WF9 J;  3G71 H;  3NVV C;  2ZJP J;  1QPR A;  1K8A J;  1YTE A;  1NJI J;  1JJ2 H;  1DGJ A;  2ZJR J;  1SIJ A;  3C2O A;  4YEK A;  3G4S H;  4C7Z A;  1VQP H;  5JVH J;  2OTL H;  3CCU H;  3SR6 C;  1X1O A;  5HL7 J;  3PIO J;  1VQ4 H;  5AYY A;  1N61 B;  3H5Q A;  3DLL J;  2WK6 A;  1QVF H;  1QPQ A;  5EP8 A;  1V97 A;  1KQS H;  4IOA J;  1WYG A;  3AM9 A;  1YIT H;  3CCQ H;  1FO4 A;  1OTP A;  2PA2 A;  1SB3 A;  1QAP A;  2OMD A;  1M1K J;  1VQK H;  2W3R B;  3C2E A;  2OTJ H;  4C80 A;  1FFV B;  1KD1 J;  5MLC O;  5AN9 F;  2W54 B;  3OW2 H;  3CCL H;  4IOC J;  4GA6 A;  2B7P A;  4U67 J;  3AN1 A;  3CCJ H;  1AZY A;  5GAD N;  1N62 B;  2ZJQ J;  5AYZ A;  5HUL A;  1Q82 J;  4I9A A;  5MPO C;  5DM6 J;  1NVI E;  3CCE H;  3J7Z M;  4WCE J;  3L0G A;  5HUO A;  1K9M J;  1VQ7 H;  3VMM A;  1QPN A;  1FM0 E;  3EUB 4;  3NVY C;  4WFN J;  2Q5W E;  1YTK A;  2W3S B;  1YJ9 H;  3CCV H;  4IO9 J;  1K73 J;  3NRZ C;  1VLB A;  2WK5 A;  1VQ6 H;  1BRW A;  4X46 A;  1FFU B;  3CCR H;  1JRP B;  1VDV A;  3C2R A;  3FAH A;  3I55 H;  3CF5 J;  3NVW C;  1NVJ A;  4LHM A;  1JRO B;  2I14 A;  2I1O A;  1FIQ C;  4EAF A;  2QA4 H;  1YI2 H;  3GNN A;  2WP4 A;  1Q7Y J;  1VQN H;  5HUP A;  1YJW H;  4US8 A;  3L4P A;  1VQM H;  5H1S O;  3B9J C;  3CMA H;  1YIJ H;  4YYY A;  1N5X A;  3C2V A;  3NS1 C;  1N8R J;  5EY3 A;  4WFB J;  3WO1 A;  1VQ8 H;  1QPO A;  2E3T A;  4AP8 A;  1VQ9 H;  1VQO H;  2J0F A;  3CCS H;  2QIE A;  3RPF A;  1Q86 J;  4KWW A;  3TQV A;  4EAD A;  3CC7 H;  5AYX A;  4ZOH A;  5JVG J;  3CC4 H;  2DSJ A; 
#chains in the Genus database with same CATH homology
 1NVJ A;  4AP8 A;  5MPO C;  2Q5W E;  1NVI E;  2QIE A;  3BII E;  3RPF A;  1FMA E;  2OMD A;  1FM0 E;  2WP4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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