1DTV | Genus

Total Genus 5

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	5
sequence length	67
structure length	67
Chain Sequence	GSHTPDESFLCYQPDQVCCFICRGAAPLPSEGECNPHPTAPWCREGAVEWVPYSTGQCRTTCIPYVE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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The Resolver thinks Pdb

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reading 67 atoms

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67 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Hydrolase inhibitor
publication title	Structure of a novel leech carboxypeptidase inhibitor determined free in solution and in complex with human carboxypeptidase A2. pubmed doi rcsb
molecule keywords	CARBOXYPEPTIDASE INHIBITOR
total genus	5
structure length	67
sequence length	67
ec nomenclature
pdb deposition date	2000-01-13

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.1040.10	Alpha Beta	2-Layer Sandwich	Carboxypeptidase Inhibitor; Chain A	Carboxypeptidase inhibitor	1dtvA00

1DTVA 1ZFIA 1ZFLA 2ABZC 1DTDB
chains in the Genus database with same CATH superfamily

3HVNA 1ZFLA 3IF8B 2ABZC 3G2PA 4BIKA 4HSCX 1ZFIA 3CQFA 1DTDB 3PJVD 1DTVA 3G2QA 1M3IA 1M3JA 3G2MA 1S3RA 3G2OA 1PFOA
chains in the Genus database with same CATH topology

1DTVA 1ZFIA 1ZFLA 2ABZC 1DTDB
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1DTV A;  1ZFI A;  1ZFL A;  2ABZ C;  1DTD B; 
#chains in the Genus database with same CATH topology
 3HVN A;  1ZFL A;  3IF8 B;  2ABZ C;  3G2P A;  4BIK A;  4HSC X;  1ZFI A;  3CQF A;  1DTD B;  3PJV D;  1DTV A;  3G2Q A;  1M3I A;  1M3J A;  3G2M A;  1S3R A;  3G2O A;  1PFO A; 
#chains in the Genus database with same CATH homology
 1DTV A;  1ZFI A;  1ZFL A;  2ABZ C;  1DTD B;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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1DTVA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN