1N0GA

Crystal structure of a cell division and cell wall biosynthesis protein upf0040 from mycoplasma pneumoniae: indication of a novel fold with a possible new conserved sequence motif
Total Genus 28
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
28
sequence length
141
structure length
141
Chain Sequence
FQGHMLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title Crystal structure of a protein associated with cell division from Mycoplasma pneumoniae (GI: 13508053): a novel fold with a conserved sequence motif.
pubmed doi rcsb
molecule tags Biosynthetic protein
source organism Mycoplasma pneumoniae
molecule keywords Protein mraZ
total genus 28
structure length 141
sequence length 141
chains with identical sequence B
ec nomenclature
pdb deposition date 2002-10-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02381 MraZ MraZ protein, putative antitoxin-like
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.330.20 Mainly Beta Beta Barrel At1g16640 B3 domain At1g16640 B3 domain 1n0gA00
1N0EA 1N0GA 1N0FA
chains in the Genus database with same CATH superfamily
1NA6A 1N0EA 4LDUA 4LDYA 4LDXA 4LDWA 4LDVA 1YELA 2C1LA 1N0FA 4I1KA 3ZI5A 3HQFA 1N0GA 1WIDA
chains in the Genus database with same CATH topology
1N0EA 2C1LA 1N0FA 3ZI5A 1N0GA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1N0E A;  1N0G A;  1N0F A; 
#chains in the Genus database with same CATH topology
 1NA6 A;  1N0E A;  4LDU A;  4LDY A;  4LDX A;  4LDW A;  4LDV A;  1YEL A;  2C1L A;  1N0F A;  4I1K A;  3ZI5 A;  3HQF A;  1N0G A;  1WID A; 
#chains in the Genus database with same CATH homology
 1N0E A;  2C1L A;  1N0F A;  3ZI5 A;  1N0G A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...