1ZFL | Genus

Total Genus 4

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	4
sequence length	67
structure length	67
Chain Sequence	GSHTPDESFLCYQPDQVCCFICRGAAPLPSEGECNPHPTAPWCREGAVEWVPYSTGQCRTTCIPYVE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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The Resolver thinks Pdb

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reading 67 atoms

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67 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Hydrolase inhibitor
source organism	Hirudo medicinalis
publication title	NMR structural characterization and computational predictions of the major intermediate in oxidative folding of leech carboxypeptidase inhibitor pubmed doi rcsb
molecule keywords	Metallocarboxypeptidase inhibitor
total genus	4
structure length	67
sequence length	67
ec nomenclature
pdb deposition date	2005-04-20

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.1040.10	Alpha Beta	2-Layer Sandwich	Carboxypeptidase Inhibitor; Chain A	Carboxypeptidase inhibitor	1zflA00

1ZFLA 1ZFIA 2ABZC 1DTDB 1DTVA
chains in the Genus database with same CATH superfamily

3G2QA 1DTDB 4BIKA 1S3RA 3CQFA 1M3IA 3IF8B 4HSCX 3HVNA 3G2PA 1PFOA 1ZFLA 3G2MA 1ZFIA 3G2OA 2ABZC 3PJVD 1M3JA 1DTVA
chains in the Genus database with same CATH topology

1ZFLA 1ZFIA 2ABZC 1DTDB 1DTVA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1ZFL A;  1ZFI A;  2ABZ C;  1DTD B;  1DTV A; 
#chains in the Genus database with same CATH topology
 3G2Q A;  1DTD B;  4BIK A;  1S3R A;  3CQF A;  1M3I A;  3IF8 B;  4HSC X;  3HVN A;  3G2P A;  1PFO A;  1ZFL A;  3G2M A;  1ZFI A;  3G2O A;  2ABZ C;  3PJV D;  1M3J A;  1DTV A; 
#chains in the Genus database with same CATH homology
 1ZFL A;  1ZFI A;  2ABZ C;  1DTD B;  1DTV A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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1ZFLA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN