3TECI

Calcium binding to thermitase. crystallographic studies of thermitase at 0, 5 and 100 mm calcium
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
63
structure length
63
Chain Sequence
KSFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPHVG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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connected with : NaN
molecule tags Complex(serine proteinase-inhibitor)
source organism Thermoactinomyces vulgaris
publication title Calcium binding to thermitase. Crystallographic studies of thermitase at 0, 5, and 100 mM calcium.
pubmed rcsb
molecule keywords THERMITASE
total genus 16
structure length 63
sequence length 63
ec nomenclature
pdb deposition date 1990-10-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
I PF00280 potato_inhibit Potato inhibitor I family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.10.10 Alpha Beta 2-Layer Sandwich Trypsin Inhibitor V; Chain A Trypsin Inhibitor V, subunit A 3tecI00
3RDZC 1DWMA 2CI2I 5FBZB 3TECI 1LW6I 1EGLA 2TECI 3RDYA 1Y33I 4B2AB 1TM7I 3W0EA 1Y3DI 1TM3I 1VBWA 1TM5I 4H4FB 1TECI 4B2CB 1TMGI 1YPAI 1YPCI 1CSEI 1Y3CI 1SBNI 1TO2I 4B2BB 3W0DA 1Y4DI 1TO1I 1YPBI 3CI2A 1TINA 1Y3FI 5FFNI 4B1TB 1Y4AI 2SECI 1MITA 1Y48I 1Y34I 1TM1I 1COAI 1MEEI 1SIBI 1TM4I 1ACBI 2SNII 1CISA 1Y1KI 1Y3BI 1HYMA
chains in the Genus database with same CATH superfamily
3RDZC 1DWMA 2CI2I 5FBZB 2KUFA 3TECI 1LW6I 1EGLA 2KUEA 2TECI 3RDYA 1Y33I 4B2AB 3PY9A 1TM7I 3W0EA 1Y3DI 1TM3I 1VBWA 1TM5I 4H4FB 1TECI 4B2CB 1TMGI 1YPAI 2KUIA 1YPCI 1CSEI 1Y3CI 1SBNI 1TO2I 4B2BB 3W0DA 1Y4DI 1TO1I 1YPBI 3CI2A 3M9GA 1TINA 1Y3FI 5FFNI 4B1TB 3OUVA 1Y4AI 2SECI 5E0ZA 1MITA 1Y48I 1Y34I 2MGVA 1TM1I 1COAI 1MEEI 1SIBI 1TM4I 1ACBI 2SNII 1CISA 2KUDA 5E10A 1Y1KI 1Y3BI 5E0YA 1HYMA
chains in the Genus database with same CATH topology
3RDZC 1DWMA 2CI2I 5FBZB 3TECI 1LW6I 1EGLA 2TECI 3RDYA 1Y33I 4B2AB 1TM7I 3W0EA 1Y3DI 1TM3I 1VBWA 1TM5I 4H4FB 1TECI 4B2CB 1TMGI 1YPAI 1YPCI 1CSEI 1Y3CI 1SBNI 1TO2I 4B2BB 3W0DA 1Y4DI 1TO1I 1YPBI 3CI2A 1TINA 1Y3FI 5FFNI 4B1TB 1Y4AI 2SECI 1MITA 1Y48I 1Y34I 1TM1I 1COAI 1MEEI 1SIBI 1TM4I 1ACBI 2SNII 1CISA 1Y1KI 1Y3BI 1HYMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RDZ C;  1DWM A;  2CI2 I;  5FBZ B;  3TEC I;  1LW6 I;  1EGL A;  2TEC I;  3RDY A;  1Y33 I;  4B2A B;  1TM7 I;  3W0E A;  1Y3D I;  1TM3 I;  1VBW A;  1TM5 I;  4H4F B;  1TEC I;  4B2C B;  1TMG I;  1YPA I;  1YPC I;  1CSE I;  1Y3C I;  1SBN I;  1TO2 I;  4B2B B;  3W0D A;  1Y4D I;  1TO1 I;  1YPB I;  3CI2 A;  1TIN A;  1Y3F I;  5FFN I;  4B1T B;  1Y4A I;  2SEC I;  1MIT A;  1Y48 I;  1Y34 I;  1TM1 I;  1COA I;  1MEE I;  1SIB I;  1TM4 I;  1ACB I;  2SNI I;  1CIS A;  1Y1K I;  1Y3B I;  1HYM A; 
#chains in the Genus database with same CATH topology
 3RDZ C;  1DWM A;  2CI2 I;  5FBZ B;  2KUF A;  3TEC I;  1LW6 I;  1EGL A;  2KUE A;  2TEC I;  3RDY A;  1Y33 I;  4B2A B;  3PY9 A;  1TM7 I;  3W0E A;  1Y3D I;  1TM3 I;  1VBW A;  1TM5 I;  4H4F B;  1TEC I;  4B2C B;  1TMG I;  1YPA I;  2KUI A;  1YPC I;  1CSE I;  1Y3C I;  1SBN I;  1TO2 I;  4B2B B;  3W0D A;  1Y4D I;  1TO1 I;  1YPB I;  3CI2 A;  3M9G A;  1TIN A;  1Y3F I;  5FFN I;  4B1T B;  3OUV A;  1Y4A I;  2SEC I;  5E0Z A;  1MIT A;  1Y48 I;  1Y34 I;  2MGV A;  1TM1 I;  1COA I;  1MEE I;  1SIB I;  1TM4 I;  1ACB I;  2SNI I;  1CIS A;  2KUD A;  5E10 A;  1Y1K I;  1Y3B I;  5E0Y A;  1HYM A; 
#chains in the Genus database with same CATH homology
 3RDZ C;  1DWM A;  2CI2 I;  5FBZ B;  3TEC I;  1LW6 I;  1EGL A;  2TEC I;  3RDY A;  1Y33 I;  4B2A B;  1TM7 I;  3W0E A;  1Y3D I;  1TM3 I;  1VBW A;  1TM5 I;  4H4F B;  1TEC I;  4B2C B;  1TMG I;  1YPA I;  1YPC I;  1CSE I;  1Y3C I;  1SBN I;  1TO2 I;  4B2B B;  3W0D A;  1Y4D I;  1TO1 I;  1YPB I;  3CI2 A;  1TIN A;  1Y3F I;  5FFN I;  4B1T B;  1Y4A I;  2SEC I;  1MIT A;  1Y48 I;  1Y34 I;  1TM1 I;  1COA I;  1MEE I;  1SIB I;  1TM4 I;  1ACB I;  2SNI I;  1CIS A;  1Y1K I;  1Y3B I;  1HYM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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