1MZLA

Maize nonspecific lipid transfer protein
Total Genus 27
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
27
sequence length
93
structure length
93
Chain Sequence
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Lipid transport
publication title High-resolution crystal structure of the non-specific lipid-transfer protein from maize seedlings.
pubmed doi rcsb
molecule keywords MAIZE NONSPECIFIC LIPID TRANSFER PROTEIN
total genus 27
structure length 93
sequence length 93
ec nomenclature
pdb deposition date 1995-01-26

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00234 Tryp_alpha_amyl Protease inhibitor/seed storage/LTP family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.110.10 Mainly Alpha Orthogonal Bundle Hydrophobic Seed Protein Plant lipid-transfer and hydrophobic proteins 1mzlA00
1BWOA 1FK1A 1RZLA 1W2QA 2RKNA 1UVCA 1PNBB 1L6HA 1FK7A 2LVFA 1FK0A 1BEAA 4CVWC 1UVBA 1MZMA 1BE2A 1FK2A 4XUWA 1N89A 1BV2A 1MIDA 1HYPA 1T12A 1SM7A 2DS2B 1JTBA 1HSSA 1TMQB 3GSHA 1CZ2A 2N2ZA 1BIPA 1BFAA 2ALGA 1TUKA 1GH1A 1FK5A 1AFHA 1UVAA 1PSYA 2N81A 5DOMA 2MALA 1MZLA 1LIPA 2B5SA 1S6DA 1B1UA 1FK3A 1FK6A 1SIYA 1FK4A
chains in the Genus database with same CATH superfamily
1BWOA 1FK1A 1RZLA 1W2QA 2RKNA 1UVCA 1PNBB 1L6HA 1MIWA 1FK7A 2LVFA 1FK0A 1BEAA 4CVWC 1UVBA 1MZMA 1BE2A 3HMJG 1FK2A 4XUWA 1N89A 1BV2A 1MIDA 1HYPA 1T12A 1SM7A 2DS2B 3H37A 2VKZG 1JTBA 1HSSA 1TMQB 3GSHA 2UV8G 1MIVA 1CZ2A 2N2ZA 1BIPA 1BFAA 2ALGA 1TUKA 1GH1A 1FK5A 1AFHA 1UVAA 1PSYA 2N81A 5DOMA 1MIYA 3H3AA 2MALA 1MZLA 1LIPA 2B5SA 1S6DA 1B1UA 1FK3A 1FK6A 1SIYA 1FK4A
chains in the Genus database with same CATH topology
1BWOA 1FK1A 1RZLA 1W2QA 2RKNA 1UVCA 1PNBB 1L6HA 1FK7A 2LVFA 1FK0A 1BEAA 4CVWC 1UVBA 1MZMA 1BE2A 1FK2A 4XUWA 1N89A 1BV2A 1MIDA 1HYPA 1T12A 1SM7A 2DS2B 1JTBA 1HSSA 1TMQB 3GSHA 1CZ2A 2N2ZA 1BIPA 1BFAA 2ALGA 1TUKA 1GH1A 1FK5A 1AFHA 1UVAA 1PSYA 2N81A 5DOMA 2MALA 1MZLA 1LIPA 2B5SA 1S6DA 1B1UA 1FK3A 1FK6A 1SIYA 1FK4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1BWO A;  1FK1 A;  1RZL A;  1W2Q A;  2RKN A;  1UVC A;  1PNB B;  1L6H A;  1FK7 A;  2LVF A;  1FK0 A;  1BEA A;  4CVW C;  1UVB A;  1MZM A;  1BE2 A;  1FK2 A;  4XUW A;  1N89 A;  1BV2 A;  1MID A;  1HYP A;  1T12 A;  1SM7 A;  2DS2 B;  1JTB A;  1HSS A;  1TMQ B;  3GSH A;  1CZ2 A;  2N2Z A;  1BIP A;  1BFA A;  2ALG A;  1TUK A;  1GH1 A;  1FK5 A;  1AFH A;  1UVA A;  1PSY A;  2N81 A;  5DOM A;  2MAL A;  1MZL A;  1LIP A;  2B5S A;  1S6D A;  1B1U A;  1FK3 A;  1FK6 A;  1SIY A;  1FK4 A; 
#chains in the Genus database with same CATH topology
 1BWO A;  1FK1 A;  1RZL A;  1W2Q A;  2RKN A;  1UVC A;  1PNB B;  1L6H A;  1MIW A;  1FK7 A;  2LVF A;  1FK0 A;  1BEA A;  4CVW C;  1UVB A;  1MZM A;  1BE2 A;  3HMJ G;  1FK2 A;  4XUW A;  1N89 A;  1BV2 A;  1MID A;  1HYP A;  1T12 A;  1SM7 A;  2DS2 B;  3H37 A;  2VKZ G;  1JTB A;  1HSS A;  1TMQ B;  3GSH A;  2UV8 G;  1MIV A;  1CZ2 A;  2N2Z A;  1BIP A;  1BFA A;  2ALG A;  1TUK A;  1GH1 A;  1FK5 A;  1AFH A;  1UVA A;  1PSY A;  2N81 A;  5DOM A;  1MIY A;  3H3A A;  2MAL A;  1MZL A;  1LIP A;  2B5S A;  1S6D A;  1B1U A;  1FK3 A;  1FK6 A;  1SIY A;  1FK4 A; 
#chains in the Genus database with same CATH homology
 1BWO A;  1FK1 A;  1RZL A;  1W2Q A;  2RKN A;  1UVC A;  1PNB B;  1L6H A;  1FK7 A;  2LVF A;  1FK0 A;  1BEA A;  4CVW C;  1UVB A;  1MZM A;  1BE2 A;  1FK2 A;  4XUW A;  1N89 A;  1BV2 A;  1MID A;  1HYP A;  1T12 A;  1SM7 A;  2DS2 B;  1JTB A;  1HSS A;  1TMQ B;  3GSH A;  1CZ2 A;  2N2Z A;  1BIP A;  1BFA A;  2ALG A;  1TUK A;  1GH1 A;  1FK5 A;  1AFH A;  1UVA A;  1PSY A;  2N81 A;  5DOM A;  2MAL A;  1MZL A;  1LIP A;  2B5S A;  1S6D A;  1B1U A;  1FK3 A;  1FK6 A;  1SIY A;  1FK4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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