1A7HA

Gamma s crystallin c-terminal domain
Total Genus 18

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
18
sequence length
86
structure length
86
Chain Sequence
MYKIQIFEKGDFNGQMHETTEDCPSIMEQFHMREVHSCKVLEGAWIFYELPNYRGRQYLLDKKEYRKPVDWGAASPAVQSFRRIVE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Eye-lens protein
source organism Bos taurus
publication title The C-terminal domains of gammaS-crystallin pair about a distorted twofold axis.
pubmed doi rcsb
molecule keywords GAMMAS CRYSTALLIN
total genus 18
structure length 86
sequence length 86
chains with identical sequence B
ec nomenclature
pdb deposition date 1998-03-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00030 Crystall Beta/Gamma crystallin
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.60.20.10 Mainly Beta Sandwich Gamma-B Crystallin; domain 1 Crystallins 1a7hA00
3HZBA 1ZIRA 1I5IA 1M8UA 1ZWMA 4W9BA 2K1XA 4EL6A 1H4AX 2NBRA 1PRSA 4IAUA 3SO1A 2M3CA 3IAJA 1A7HA 4PSPA 2BB2A 3ENUA 3I9HA 1YTQA 4JGFA 4PSRA 4AKAA 2BV2A 1ZGTA 1BLBA 3SNZA 1NPSA 1GAMA 2G98A 2M3UA 3SO0A 5HT8A 1ZIEA 4NI3A 1BD7A 2JDGA 4GCRA 4W9AA 4GR7A 1YHPA 5HT9A 1HA4A 2M3TA 1A45A 2JDFA 4FD9A 1ZIQA 1ZWOA 1HK0X 3CW3A 2K1WA 3LWKA 1HDFA 3SNYA 3QK3A 1AG4A 1DSLA 2A5MA 2KFBA 2V2UA 1GCSA 3ENTA 1AMMA 2KP5A 1OKIA 2B1OA 1A5DA 3HZ2A 1E7NA 1ELPA 2DADA 1PRRA
chains in the Genus database with same CATH superfamily
1ZIRA 1I5IA 4EL6A 2NBRA 2BB2A 4AKAA 2BV2A 1NPSA 1ZIEA 4NI3A 4GCRA 2JDGA 2M3TA 1HK0X 1GH5A 3QK3A 2A5MA 3UJZA 1A5DA 1ELPA 3SNYA 2M3CA 4PSRA 1ZGTA 2M3UA 5HT8A 2G98A 4GR7A 5HT9A 1A45A 4FD9A 1ZWOA 1HDFA 1DSLA 1GCSA 1AMMA 2KP5A 1OKIA 2B1OA 3HZ2A 2DADA 3HZBA 1M8UA 4W9BA 4IAUA 1G6EA 4PSPA 3I9HA 3SNZA 1GAMA 3SO0A 1BHUA 4W9AA 1YHPA 1AG4A 2KFBA 2V2UA 1PRSA 4JGFA 1E7NA 1WKTA 2K1XA 2K1WA 1PRRA 1ZWMA 1H4AX 3SO1A 3IAJA 1A7HA 3ENUA 1YTQA 1BLBA 1BD7A 1F53A 1HA4A 1C01A 2JDFA 1ZIQA 3CW3A 3LWKA 3ENTA
chains in the Genus database with same CATH topology
3HZBA 1ZIRA 1I5IA 1M8UA 1ZWMA 4W9BA 2K1XA 4EL6A 1H4AX 2NBRA 1PRSA 4IAUA 3SO1A 2M3CA 3IAJA 1A7HA 4PSPA 2BB2A 3ENUA 3I9HA 1YTQA 4JGFA 4PSRA 4AKAA 2BV2A 1ZGTA 1BLBA 3SNZA 1NPSA 1GAMA 2G98A 2M3UA 3SO0A 5HT8A 1ZIEA 4NI3A 1BD7A 2JDGA 4GCRA 4W9AA 4GR7A 1YHPA 5HT9A 1HA4A 2M3TA 1A45A 2JDFA 4FD9A 1ZIQA 1ZWOA 1HK0X 3CW3A 2K1WA 3LWKA 1HDFA 3SNYA 3QK3A 1AG4A 1DSLA 2A5MA 2KFBA 2V2UA 1GCSA 3ENTA 1AMMA 2KP5A 1OKIA 2B1OA 1A5DA 3HZ2A 1E7NA 1ELPA 2DADA 1PRRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3HZB A;  1ZIR A;  1I5I A;  1M8U A;  1ZWM A;  4W9B A;  2K1X A;  4EL6 A;  1H4A X;  2NBR A;  1PRS A;  4IAU A;  3SO1 A;  2M3C A;  3IAJ A;  1A7H A;  4PSP A;  2BB2 A;  3ENU A;  3I9H A;  1YTQ A;  4JGF A;  4PSR A;  4AKA A;  2BV2 A;  1ZGT A;  1BLB A;  3SNZ A;  1NPS A;  1GAM A;  2G98 A;  2M3U A;  3SO0 A;  5HT8 A;  1ZIE A;  4NI3 A;  1BD7 A;  2JDG A;  4GCR A;  4W9A A;  4GR7 A;  1YHP A;  5HT9 A;  1HA4 A;  2M3T A;  1A45 A;  2JDF A;  4FD9 A;  1ZIQ A;  1ZWO A;  1HK0 X;  3CW3 A;  2K1W A;  3LWK A;  1HDF A;  3SNY A;  3QK3 A;  1AG4 A;  1DSL A;  2A5M A;  2KFB A;  2V2U A;  1GCS A;  3ENT A;  1AMM A;  2KP5 A;  1OKI A;  2B1O A;  1A5D A;  3HZ2 A;  1E7N A;  1ELP A;  2DAD A;  1PRR A; 
#chains in the Genus database with same CATH topology
 1ZIR A;  1I5I A;  4EL6 A;  2NBR A;  2BB2 A;  4AKA A;  2BV2 A;  1NPS A;  1ZIE A;  4NI3 A;  4GCR A;  2JDG A;  2M3T A;  1HK0 X;  1GH5 A;  3QK3 A;  2A5M A;  3UJZ A;  1A5D A;  1ELP A;  3SNY A;  2M3C A;  4PSR A;  1ZGT A;  2M3U A;  5HT8 A;  2G98 A;  4GR7 A;  5HT9 A;  1A45 A;  4FD9 A;  1ZWO A;  1HDF A;  1DSL A;  1GCS A;  1AMM A;  2KP5 A;  1OKI A;  2B1O A;  3HZ2 A;  2DAD A;  3HZB A;  1M8U A;  4W9B A;  4IAU A;  1G6E A;  4PSP A;  3I9H A;  3SNZ A;  1GAM A;  3SO0 A;  1BHU A;  4W9A A;  1YHP A;  1AG4 A;  2KFB A;  2V2U A;  1PRS A;  4JGF A;  1E7N A;  1WKT A;  2K1X A;  2K1W A;  1PRR A;  1ZWM A;  1H4A X;  3SO1 A;  3IAJ A;  1A7H A;  3ENU A;  1YTQ A;  1BLB A;  1BD7 A;  1F53 A;  1HA4 A;  1C01 A;  2JDF A;  1ZIQ A;  3CW3 A;  3LWK A;  3ENT A; 
#chains in the Genus database with same CATH homology
 3HZB A;  1ZIR A;  1I5I A;  1M8U A;  1ZWM A;  4W9B A;  2K1X A;  4EL6 A;  1H4A X;  2NBR A;  1PRS A;  4IAU A;  3SO1 A;  2M3C A;  3IAJ A;  1A7H A;  4PSP A;  2BB2 A;  3ENU A;  3I9H A;  1YTQ A;  4JGF A;  4PSR A;  4AKA A;  2BV2 A;  1ZGT A;  1BLB A;  3SNZ A;  1NPS A;  1GAM A;  2G98 A;  2M3U A;  3SO0 A;  5HT8 A;  1ZIE A;  4NI3 A;  1BD7 A;  2JDG A;  4GCR A;  4W9A A;  4GR7 A;  1YHP A;  5HT9 A;  1HA4 A;  2M3T A;  1A45 A;  2JDF A;  4FD9 A;  1ZIQ A;  1ZWO A;  1HK0 X;  3CW3 A;  2K1W A;  3LWK A;  1HDF A;  3SNY A;  3QK3 A;  1AG4 A;  1DSL A;  2A5M A;  2KFB A;  2V2U A;  1GCS A;  3ENT A;  1AMM A;  2KP5 A;  1OKI A;  2B1O A;  1A5D A;  3HZ2 A;  1E7N A;  1ELP A;  2DAD A;  1PRR A; 
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