2PFR | Genus

Total Genus 90

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	90
sequence length	290
structure length	290
Chain Sequence	SDIEAYFERIGYKNSRNKLDLETLTDILEHQIRAVPFENLNMHCGQAMELGLEAIFDHIVRRNRGGWCLQVNQLLYWALTTIGFQTTMLGGYFYIPPVNKYSTGMVHLLLQVTIDGRNYIVDAGSGSSSQMWQPLELISGKDQPQVPCIFCLTEERGIWYLDQIRREQYITNKEFLNSHLLPKKKHQKIYLFTLEPRTIEDFESMNTYLQTSPTSSFITTSFCSLQTPEGVYCLVGFILTYRKFNYKDNTDLVEFKTLTEEEVEEVLKNIFKISLGRNLVPKPGDGSLTI

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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The Resolver thinks Pdb

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reading 290 atoms

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290 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

publication title	The Crystal Structure of Human N-acetyltransferase 2 in complex with CoA rcsb
molecule keywords	Arylamine N-acetyltransferase 2
molecule tags	Transferase
source organism	Homo sapiens
total genus	90
structure length	290
sequence length	290
chains with identical sequence	B
ec nomenclature	ec 2.3.1.5: Arylamine N-acetyltransferase.
pdb deposition date	2007-04-05

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00797	Acetyltransf_2	N-acetyltransferase

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.2140.20	Alpha Beta	2-Layer Sandwich	Arylamine N-acetyltransferase fold	Arylamine N-acetyltransferase fold	2pfrA00

4DMOA 3LNBA 2IJAA 2PQTA 2PFRA
chains in the Genus database with same CATH superfamily

3LNBA 2BSZA 1W5RA 3D9WA 2VFCA 4GUZA 2VFBA 2IJAA 4BGFA 4B55A 1W6FA 4DMOA 3LTWA 1GX3A 4C5PA 4NV8A 1W4TA 2PQTA 4NV7A 2PFRA
chains in the Genus database with same CATH topology

4DMOA 3LNBA 2IJAA 2PQTA 2PFRA
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 4DMO A;  3LNB A;  2IJA A;  2PQT A;  2PFR A; 
#chains in the Genus database with same CATH topology
 3LNB A;  2BSZ A;  1W5R A;  3D9W A;  2VFC A;  4GUZ A;  2VFB A;  2IJA A;  4BGF A;  4B55 A;  1W6F A;  4DMO A;  3LTW A;  1GX3 A;  4C5P A;  4NV8 A;  1W4T A;  2PQT A;  4NV7 A;  2PFR A; 
#chains in the Genus database with same CATH homology
 4DMO A;  3LNB A;  2IJA A;  2PQT A;  2PFR A;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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2PFRA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations