1W53A

Kinase recruitment domain of the stress phosphatase rsbu
Total Genus 37
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
84
structure length
84
Chain Sequence
MDFREVIEQRYHQLLSRYIAELTETSLYQAQKFSRKTIEHQIPPEEIISIHRKVLKELYPSLPEDVFHSLDFLIEVMIGYGMAY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Functional and Structural Characterization of Rsbu, a Stress Signaling Protein Phosphatase 2C
pubmed doi rcsb
molecule tags Hydrolase
source organism Bacillus subtilis
molecule keywords PHOSPHOSERINE PHOSPHATASE RSBU
total genus 37
structure length 84
sequence length 84
ec nomenclature ec 3.1.3.3: Phosphoserine phosphatase.
pdb deposition date 2004-08-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF08673 RsbU_N Phosphoserine phosphatase RsbU, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1240.30 Mainly Alpha Orthogonal Bundle Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 KaiA/RbsU domain 1w53A00
2J70A 1SUYA 5C5EA 1SV1A 1Q6BA 1V2ZA 2J6YA 1Q6AA 2J6ZA 4G86A 1W53A 1R5QA 1R8JA
chains in the Genus database with same CATH superfamily
2J70A 2FMME 1QSAA 5C5EA 2J6YA 1Q6AA 1K98A 3M1MA 4M0MA 2PBIA 1BMTA 3BJDA 1W53A 1R8JA 4HEHA 3WHPA 1SUYA 1K7YA 1SV1A 3L9TA 3H20A 1SLYA 2J6ZA 1R5QA 5C8DA 1UTUA 3EZXA 3IV9A 4X8QA 1QTEA 1V2ZA 2I2XB 1UZ3A 4HH3C 4JGIA 3BULA 4G86A 1Q6BA 3IVAA
chains in the Genus database with same CATH topology
2J70A 1SUYA 5C5EA 1SV1A 1Q6BA 1V2ZA 2J6YA 1Q6AA 2J6ZA 4G86A 1W53A 1R5QA 1R8JA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2J70 A;  1SUY A;  5C5E A;  1SV1 A;  1Q6B A;  1V2Z A;  2J6Y A;  1Q6A A;  2J6Z A;  4G86 A;  1W53 A;  1R5Q A;  1R8J A; 
#chains in the Genus database with same CATH topology
 2J70 A;  2FMM E;  1QSA A;  5C5E A;  2J6Y A;  1Q6A A;  1K98 A;  3M1M A;  4M0M A;  2PBI A;  1BMT A;  3BJD A;  1W53 A;  1R8J A;  4HEH A;  3WHP A;  1SUY A;  1K7Y A;  1SV1 A;  3L9T A;  3H20 A;  1SLY A;  2J6Z A;  1R5Q A;  5C8D A;  1UTU A;  3EZX A;  3IV9 A;  4X8Q A;  1QTE A;  1V2Z A;  2I2X B;  1UZ3 A;  4HH3 C;  4JGI A;  3BUL A;  4G86 A;  1Q6B A;  3IVA A; 
#chains in the Genus database with same CATH homology
 2J70 A;  1SUY A;  5C5E A;  1SV1 A;  1Q6B A;  1V2Z A;  2J6Y A;  1Q6A A;  2J6Z A;  4G86 A;  1W53 A;  1R5Q A;  1R8J A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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