The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
147
|
sequence length |
415
|
structure length |
415
|
Chain Sequence |
GQQYRPRMAFLQKIEALVKDMQNPETGVRMHNQRVLVTSVPHAMTGGDVLQWITQRLWISNLEAQNLGNFIVKYGYIYPLQDPKNLILKPDSSLYRFQTPYFWPTQQWPAEDTDYAIYLAKRNIKKKGILEEYEKENYDFLNKKINYKWDFVIMQAKEQYRTGKERNKADRYALDCQEKAYWLVHRSPPGMNNVLDYGLDRVTNPNEVKKQTVTAVRKEIMYYQQALMRSTVKSSVSLGGIVKYSEQFSSNDAIMSGCLPSNPWITDDTQFWDLNAKLVEIPTKMRVERWAFNFSELIRDPKGRQSFQYFLKKEFSGENLGFWEACEDLKYGDQSKVKEKAEEIYKLFLAPGARRWINIDGKTMDITVKGLRHPHRYVLDAAQTHIYMLMKKDSYARYLKSPIYKEMLAKAIEPQ
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| molecule keywords |
Regulator of G-protein signaling 9
|
| publication title |
Crystal structure of the multifunctional Gbeta5-RGS9 complex.
pubmed doi rcsb |
| source organism |
Mus musculus
|
| molecule tags |
Signaling protein
|
| total genus |
147
|
| structure length |
415
|
| sequence length |
415
|
| chains with identical sequence |
C
|
| ec nomenclature | |
| pdb deposition date | 2007-03-28 |
| chain | Pfam Accession Code | Pfam Family Identifier | Pfam Description |
|---|---|---|---|
| A | PF00610 | DEP | Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) |
| A | PF00615 | RGS | Regulator of G protein signaling domain |
| A | PF00631 | G-gamma | GGL domain |
| A | PF18148 | RGS_DHEX | Regulator of G-protein signalling DHEX domain |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | ||
| Mainly Alpha | Orthogonal Bundle | Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 | Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 | ||
| Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase; Chain G, domain 1 | Methane Monooxygenase Hydroxylase; Chain G, domain 1 | ||
| Few Secondary Structures | Irregular | G Protein Gi Gamma 2 | Transducin (heterotrimeric G protein), gamma chain |
