1LMLA

Leishmanolysin
Total Genus 135
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
135
sequence length
475
structure length
465
Chain Sequence
b'VVRDVNWGALRIAVSTEDLTDPAYHCARVGQHVKDHAGAIVTCTAEDILTNEKRDILVKHLIPQAVQLHTERLKVQQVQGKWKVTDMVGDICGDFKVPQAHITEGFSNTDFVMYVASVPSEEGVLAWATTCQTFSDGHPAVGVINIPAANIASRYDQLVTRVVTHEMAHALGFSGPFFEDARIVANVPNVRGKNFDVPVINSSTAVAKAREQYGCDTLEYLEVEDQGGAGSAGSHIKMRNAQDELMAPAAAAGYYTALTMAIFQDLGFYQADFSKAEVMPWGQNAGCAFLTNKCMEQSVTQWPAMFCNAIRCPTSRLSLGACGVTRHPGLPPYWQYFTDPSLAGVSAFMDYCPVVVPYSDGSCTQRASEAHASLLPFNVFSDAARCIDGAFRPKASYAGLCANVQCDTATRTYSVQVHGSNDYTNCTPGLRVELSTVSNAFEGGGYITCPPYVEVCQGNVQAAKD'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords LEISHMANOLYSIN
publication title The crystal structure of the Leishmania major surface proteinase leishmanolysin (gp63).
pubmed doi rcsb
molecule tags Leishmanolysin
total genus 135
structure length 465
sequence length 475
ec nomenclature ec 3.4.24.36: Leishmanolysin.
pdb deposition date 1997-03-13
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.55.10 Mainly Beta Ribbon Leishmanolysin; domain 3 Leishmanolysin domain 3 1lmlA03
2.30.34.10 Mainly Beta Roll Leishmanolysin; domain 4 Leishmanolysin domain 4 1lmlA04
3.10.170.20 Alpha Beta Roll Elastase; domain 1 Elastase; domain 1 1lmlA01
3.90.132.10 Alpha Beta Alpha-Beta Complex Leishmanolysin; domain 2 Leishmanolysin , domain 2 1lmlA02
1LMLA
chains in the Genus database with same CATH superfamily
3SSBA 3T8HA 5TMNE 3T8DA 3TMNE 1THLA 5TLIA 1ESPA 1KR6A 3P7RE 4B52A 3FLFA 1LMLA 5K7TA 8TLNE 4D9WA 3FORA 3ZI6A 1KTOA 4MZNE 3T2IE 3NQXA 4N4EE 3DNZA 4OI5E 3T87A 3FGDA 4OW3A 3MS3A 3N21A 1FJVA 1KKKA 1Z9GE 3P7QE 1KEIA 3DBKA 2TLIA 5JVIE 2A7GE 3QH1A 1TMNE 5DLHA 1LNDE 1Y3GE 3FCQA 3MSAA 3NN7A 5JXNE 5DPEE 1FJQA 3MSFA 3EIMA 4TNLA 3T2JE 3T8FA 5JS3E 1FJ3A 3FXSA 5L41E 1KROA 1FJTA 3MSNA 3T8CA 5JSSE 1TLXA 2G4ZA 3T74A 3NQZB 3FVPA 1KS7A 2WI0A 7TLIA 5HQDA 4K89A 3QH5A 5L3UE 1EZMA 5JT9E 3P7VE 1LNEE 1U4GA 4GERA 3P7WE 4K90A 6TMNE 5FXNA 3T8GA 3P7TE 1FJWA 1NPCA 3DO2A 1LNBE 1PE5A 2WHZA 3FXPA 1KJOA 5TLNA 4TLNA 1BQBA 1LNFE 3QGOA 1OS0A 8TLIA 1LNAE 2TMNE 1ZDPE 5FSJA 4H57A 4N66E 5DPFE 5L8PE 3T73A 5A3YA 5FSPA 1QF1A 2TLXA 5LIFE 3F2PA 4D91A 1TLPE 1L3FE 1FJOA 1QF2A 1HYTA 1TLIA 1KL6A 1FJUA 5FSSA 3FBOA 3F28A 3P7PE 4MXJE 3DO0A 3T2HE 3TLIA 3FB0A 7TLNA 4N5PE 4TMNE 4MWPE 3NQYB 6TLIA 1KJPA 5LWDE 1PE7A 1PE8A 3DO1A 1LNCE 1GXWA 4M65A 1QF0A 3P7SE 4TLIA 3FV4A 3LS7A 3P7UE 2VQXA 4MTWE
chains in the Genus database with same CATH topology
3SSBA 3T8HA 5TMNE 3T8DA 3TMNE 1THLA 5TLIA 1ESPA 1KR6A 3P7RE 4B52A 3FLFA 1LMLA 5K7TA 8TLNE 4D9WA 3FORA 3ZI6A 1KTOA 4MZNE 3T2IE 3NQXA 4N4EE 3DNZA 4OI5E 3T87A 3FGDA 4OW3A 3MS3A 3N21A 1FJVA 1KKKA 1Z9GE 3P7QE 1KEIA 3DBKA 2TLIA 5JVIE 2A7GE 3QH1A 1TMNE 5DLHA 1LNDE 1Y3GE 3FCQA 3MSAA 3NN7A 5JXNE 5DPEE 1FJQA 3MSFA 3EIMA 4TNLA 3T2JE 3T8FA 5JS3E 1FJ3A 3FXSA 5L41E 1KROA 1FJTA 3MSNA 3T8CA 5JSSE 1TLXA 2G4ZA 3T74A 3NQZB 3FVPA 1KS7A 2WI0A 7TLIA 5HQDA 4K89A 3QH5A 5L3UE 1EZMA 5JT9E 3P7VE 1LNEE 1U4GA 4GERA 3P7WE 4K90A 6TMNE 5FXNA 3T8GA 3P7TE 1FJWA 1NPCA 3DO2A 1LNBE 1PE5A 2WHZA 3FXPA 1KJOA 5TLNA 4TLNA 1BQBA 1LNFE 3QGOA 1OS0A 8TLIA 1LNAE 2TMNE 1ZDPE 5FSJA 4H57A 4N66E 5DPFE 5L8PE 3T73A 5A3YA 5FSPA 1QF1A 2TLXA 5LIFE 3F2PA 4D91A 1TLPE 1L3FE 1FJOA 1QF2A 1HYTA 1TLIA 1KL6A 1FJUA 5FSSA 3FBOA 3F28A 3P7PE 4MXJE 3DO0A 3T2HE 3TLIA 3FB0A 7TLNA 4N5PE 4TMNE 4MWPE 3NQYB 6TLIA 1KJPA 5LWDE 1PE7A 1PE8A 3DO1A 1LNCE 1GXWA 4M65A 1QF0A 3P7SE 4TLIA 3FV4A 3LS7A 3P7UE 2VQXA 4MTWE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1LML A; 
#chains in the Genus database with same CATH topology
 3SSB A;  3T8H A;  5TMN E;  3T8D A;  3TMN E;  1THL A;  5TLI A;  1ESP A;  1KR6 A;  3P7R E;  4B52 A;  3FLF A;  1LML A;  5K7T A;  8TLN E;  4D9W A;  3FOR A;  3ZI6 A;  1KTO A;  4MZN E;  3T2I E;  3NQX A;  4N4E E;  3DNZ A;  4OI5 E;  3T87 A;  3FGD A;  4OW3 A;  3MS3 A;  3N21 A;  1FJV A;  1KKK A;  1Z9G E;  3P7Q E;  1KEI A;  3DBK A;  2TLI A;  5JVI E;  2A7G E;  3QH1 A;  1TMN E;  5DLH A;  1LND E;  1Y3G E;  3FCQ A;  3MSA A;  3NN7 A;  5JXN E;  5DPE E;  1FJQ A;  3MSF A;  3EIM A;  4TNL A;  3T2J E;  3T8F A;  5JS3 E;  1FJ3 A;  3FXS A;  5L41 E;  1KRO A;  1FJT A;  3MSN A;  3T8C A;  5JSS E;  1TLX A;  2G4Z A;  3T74 A;  3NQZ B;  3FVP A;  1KS7 A;  2WI0 A;  7TLI A;  5HQD A;  4K89 A;  3QH5 A;  5L3U E;  1EZM A;  5JT9 E;  3P7V E;  1LNE E;  1U4G A;  4GER A;  3P7W E;  4K90 A;  6TMN E;  5FXN A;  3T8G A;  3P7T E;  1FJW A;  1NPC A;  3DO2 A;  1LNB E;  1PE5 A;  2WHZ A;  3FXP A;  1KJO A;  5TLN A;  4TLN A;  1BQB A;  1LNF E;  3QGO A;  1OS0 A;  8TLI A;  1LNA E;  2TMN E;  1ZDP E;  5FSJ A;  4H57 A;  4N66 E;  5DPF E;  5L8P E;  3T73 A;  5A3Y A;  5FSP A;  1QF1 A;  2TLX A;  5LIF E;  3F2P A;  4D91 A;  1TLP E;  1L3F E;  1FJO A;  1QF2 A;  1HYT A;  1TLI A;  1KL6 A;  1FJU A;  5FSS A;  3FBO A;  3F28 A;  3P7P E;  4MXJ E;  3DO0 A;  3T2H E;  3TLI A;  3FB0 A;  7TLN A;  4N5P E;  4TMN E;  4MWP E;  3NQY B;  6TLI A;  1KJP A;  5LWD E;  1PE7 A;  1PE8 A;  3DO1 A;  1LNC E;  1GXW A;  4M65 A;  1QF0 A;  3P7S E;  4TLI A;  3FV4 A;  3LS7 A;  3P7U E;  2VQX A;  4MTW E; 
#chains in the Genus database with same CATH homology
 3SSB A;  3T8H A;  5TMN E;  3T8D A;  3TMN E;  1THL A;  5TLI A;  1ESP A;  1KR6 A;  3P7R E;  4B52 A;  3FLF A;  1LML A;  5K7T A;  8TLN E;  4D9W A;  3FOR A;  3ZI6 A;  1KTO A;  4MZN E;  3T2I E;  3NQX A;  4N4E E;  3DNZ A;  4OI5 E;  3T87 A;  3FGD A;  4OW3 A;  3MS3 A;  3N21 A;  1FJV A;  1KKK A;  1Z9G E;  3P7Q E;  1KEI A;  3DBK A;  2TLI A;  5JVI E;  2A7G E;  3QH1 A;  1TMN E;  5DLH A;  1LND E;  1Y3G E;  3FCQ A;  3MSA A;  3NN7 A;  5JXN E;  5DPE E;  1FJQ A;  3MSF A;  3EIM A;  4TNL A;  3T2J E;  3T8F A;  5JS3 E;  1FJ3 A;  3FXS A;  5L41 E;  1KRO A;  1FJT A;  3MSN A;  3T8C A;  5JSS E;  1TLX A;  2G4Z A;  3T74 A;  3NQZ B;  3FVP A;  1KS7 A;  2WI0 A;  7TLI A;  5HQD A;  4K89 A;  3QH5 A;  5L3U E;  1EZM A;  5JT9 E;  3P7V E;  1LNE E;  1U4G A;  4GER A;  3P7W E;  4K90 A;  6TMN E;  5FXN A;  3T8G A;  3P7T E;  1FJW A;  1NPC A;  3DO2 A;  1LNB E;  1PE5 A;  2WHZ A;  3FXP A;  1KJO A;  5TLN A;  4TLN A;  1BQB A;  1LNF E;  3QGO A;  1OS0 A;  8TLI A;  1LNA E;  2TMN E;  1ZDP E;  5FSJ A;  4H57 A;  4N66 E;  5DPF E;  5L8P E;  3T73 A;  5A3Y A;  5FSP A;  1QF1 A;  2TLX A;  5LIF E;  3F2P A;  4D91 A;  1TLP E;  1L3F E;  1FJO A;  1QF2 A;  1HYT A;  1TLI A;  1KL6 A;  1FJU A;  5FSS A;  3FBO A;  3F28 A;  3P7P E;  4MXJ E;  3DO0 A;  3T2H E;  3TLI A;  3FB0 A;  7TLN A;  4N5P E;  4TMN E;  4MWP E;  3NQY B;  6TLI A;  1KJP A;  5LWD E;  1PE7 A;  1PE8 A;  3DO1 A;  1LNC E;  1GXW A;  4M65 A;  1QF0 A;  3P7S E;  4TLI A;  3FV4 A;  3LS7 A;  3P7U E;  2VQX A;  4MTW E; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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