1LMLA

Leishmanolysin
Total Genus 135
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
135
sequence length
475
structure length
465
Chain Sequence
VVRDVNWGALRIAVSTEDLTDPAYHCARVGQHVKDHAGAIVTCTAEDILTNEKRDILVKHLIPQAVQLHTERLKVQQVQGKWKVTDMVGDICGDFKVPQAHITEGFSNTDFVMYVASVPSEEGVLAWATTCQTFSDGHPAVGVINIPAANIASRYDQLVTRVVTHEMAHALGFSGPFFEDARIVANVPNVRGKNFDVPVINSSTAVAKAREQYGCDTLEYLEVEDQGGAGSAGSHIKMRNAQDELMAPAAAAGYYTALTMAIFQDLGFYQADFSKAEVMPWGQNAGCAFLTNKCMEQSVTQWPAMFCNAIRCPTSRLSLGACGVTRHPGLPPYWQYFTDPSLAGVSAFMDYCPVVVPYSDGSCTQRASEAHASLLPFNVFSDAARCIDGAFRPKASYAGLCANVQCDTATRTYSVQVHGSNDYTNCTPGLRVELSTVSNAFEGGGYITCPPYVEVCQGNVQAAKD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords LEISHMANOLYSIN
publication title The crystal structure of the Leishmania major surface proteinase leishmanolysin (gp63).
pubmed doi rcsb
molecule tags Leishmanolysin
total genus 135
structure length 465
sequence length 475
ec nomenclature ec 3.4.24.36: Leishmanolysin.
pdb deposition date 1997-03-13
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.10.55.10 Mainly Beta Ribbon Leishmanolysin; domain 3 Leishmanolysin domain 3 1lmlA03
2.30.34.10 Mainly Beta Roll Leishmanolysin; domain 4 Leishmanolysin domain 4 1lmlA04
3.10.170.20 Alpha Beta Roll Elastase; domain 1 Elastase; domain 1 1lmlA01
3.90.132.10 Alpha Beta Alpha-Beta Complex Leishmanolysin; domain 2 Leishmanolysin , domain 2 1lmlA02
1LMLA
chains in the Genus database with same CATH superfamily
4TLNA 7TLIA 1PE7A 3P7VE 4MTWE 5TLIA 3DO0A 4OW3A 7TLNA 3T8HA 4TMNE 2G4ZA 1NPCA 1Y3GE 3T8DA 5JS3E 5TMNE 1KEIA 1KKKA 3T2HE 1KL6A 4K89A 4H57A 1LNBE 3FVPA 4GERA 2VQXA 1FJWA 3NQYB 2TLIA 3NQXA 3P7PE 3FBOA 3N21A 5L3UE 3FGDA 3P7UE 1QF2A 1U4GA 1FJOA 3MSAA 5FXNA 4K90A 4TNLA 1QF1A 3T8GA 8TLIA 1FJTA 5DLHA 2TMNE 3FCQA 3T8CA 3MS3A 3ZI6A 3QH1A 3SSBA 5A3YA 5FSSA 5TLNA 1FJUA 3NN7A 6TMNE 3F28A 5FSJA 1LNFE 1KJPA 3NQZB 3T87A 1Z9GE 1GXWA 3DO1A 3P7WE 3P7SE 1ZDPE 2WHZA 3EIMA 2A7GE 3DBKA 1LNDE 1EZMA 1KJOA 3FXPA 3MSFA 1KR6A 3T74A 3P7RE 5JVIE 3P7TE 4N4EE 1FJ3A 1L3FE 1LMLA 3F2PA 4D9WA 4N5PE 5K7TA 3FORA 1QF0A 3T8FA 3T2IE 1KROA 3FB0A 1PE8A 1BQBA 1TLIA 3LS7A 3P7QE 4MWPE 5L41E 4B52A 1FJQA 3TMNE 5HQDA 5JSSE 5FSPA 4MZNE 3FV4A 8TLNE 1TLPE 1OS0A 4N66E 5LWDE 1HYTA 3MSNA 5JT9E 6TLIA 1LNEE 5LIFE 1KTOA 3TLIA 4D91A 1TMNE 4M65A 5L8PE 3FXSA 3T73A 3T2JE 4TLIA 1LNAE 4OI5E 1PE5A 3DNZA 4MXJE 5DPFE 2WI0A 5DPEE 1KS7A 2TLXA 5JXNE 1LNCE 1FJVA 1TLXA 1THLA 1ESPA 3QH5A 3FLFA 3DO2A 3QGOA
chains in the Genus database with same CATH topology
4TLNA 7TLIA 1PE7A 3P7VE 4MTWE 5TLIA 3DO0A 4OW3A 7TLNA 3T8HA 4TMNE 2G4ZA 1NPCA 1Y3GE 3T8DA 5JS3E 5TMNE 1KEIA 1KKKA 3T2HE 1KL6A 4K89A 4H57A 1LNBE 3FVPA 4GERA 2VQXA 1FJWA 3NQYB 2TLIA 3NQXA 3P7PE 3FBOA 3N21A 5L3UE 3FGDA 3P7UE 1QF2A 1U4GA 1FJOA 3MSAA 5FXNA 4K90A 4TNLA 1QF1A 3T8GA 8TLIA 1FJTA 5DLHA 2TMNE 3FCQA 3T8CA 3MS3A 3ZI6A 3QH1A 3SSBA 5A3YA 5FSSA 5TLNA 1FJUA 3NN7A 6TMNE 3F28A 5FSJA 1LNFE 1KJPA 3NQZB 3T87A 1Z9GE 1GXWA 3DO1A 3P7WE 3P7SE 1ZDPE 2WHZA 3EIMA 2A7GE 3DBKA 1LNDE 1EZMA 1KJOA 3FXPA 3MSFA 1KR6A 3T74A 3P7RE 5JVIE 3P7TE 4N4EE 1FJ3A 1L3FE 1LMLA 3F2PA 4D9WA 4N5PE 5K7TA 3FORA 1QF0A 3T8FA 3T2IE 1KROA 3FB0A 1PE8A 1BQBA 1TLIA 3LS7A 3P7QE 4MWPE 5L41E 4B52A 1FJQA 3TMNE 5HQDA 5JSSE 5FSPA 4MZNE 3FV4A 8TLNE 1TLPE 1OS0A 4N66E 5LWDE 1HYTA 3MSNA 5JT9E 6TLIA 1LNEE 5LIFE 1KTOA 3TLIA 4D91A 1TMNE 4M65A 5L8PE 3FXSA 3T73A 3T2JE 4TLIA 1LNAE 4OI5E 1PE5A 3DNZA 4MXJE 5DPFE 2WI0A 5DPEE 1KS7A 2TLXA 5JXNE 1LNCE 1FJVA 1TLXA 1THLA 1ESPA 3QH5A 3FLFA 3DO2A 3QGOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1LML A; 
#chains in the Genus database with same CATH topology
 4TLN A;  7TLI A;  1PE7 A;  3P7V E;  4MTW E;  5TLI A;  3DO0 A;  4OW3 A;  7TLN A;  3T8H A;  4TMN E;  2G4Z A;  1NPC A;  1Y3G E;  3T8D A;  5JS3 E;  5TMN E;  1KEI A;  1KKK A;  3T2H E;  1KL6 A;  4K89 A;  4H57 A;  1LNB E;  3FVP A;  4GER A;  2VQX A;  1FJW A;  3NQY B;  2TLI A;  3NQX A;  3P7P E;  3FBO A;  3N21 A;  5L3U E;  3FGD A;  3P7U E;  1QF2 A;  1U4G A;  1FJO A;  3MSA A;  5FXN A;  4K90 A;  4TNL A;  1QF1 A;  3T8G A;  8TLI A;  1FJT A;  5DLH A;  2TMN E;  3FCQ A;  3T8C A;  3MS3 A;  3ZI6 A;  3QH1 A;  3SSB A;  5A3Y A;  5FSS A;  5TLN A;  1FJU A;  3NN7 A;  6TMN E;  3F28 A;  5FSJ A;  1LNF E;  1KJP A;  3NQZ B;  3T87 A;  1Z9G E;  1GXW A;  3DO1 A;  3P7W E;  3P7S E;  1ZDP E;  2WHZ A;  3EIM A;  2A7G E;  3DBK A;  1LND E;  1EZM A;  1KJO A;  3FXP A;  3MSF A;  1KR6 A;  3T74 A;  3P7R E;  5JVI E;  3P7T E;  4N4E E;  1FJ3 A;  1L3F E;  1LML A;  3F2P A;  4D9W A;  4N5P E;  5K7T A;  3FOR A;  1QF0 A;  3T8F A;  3T2I E;  1KRO A;  3FB0 A;  1PE8 A;  1BQB A;  1TLI A;  3LS7 A;  3P7Q E;  4MWP E;  5L41 E;  4B52 A;  1FJQ A;  3TMN E;  5HQD A;  5JSS E;  5FSP A;  4MZN E;  3FV4 A;  8TLN E;  1TLP E;  1OS0 A;  4N66 E;  5LWD E;  1HYT A;  3MSN A;  5JT9 E;  6TLI A;  1LNE E;  5LIF E;  1KTO A;  3TLI A;  4D91 A;  1TMN E;  4M65 A;  5L8P E;  3FXS A;  3T73 A;  3T2J E;  4TLI A;  1LNA E;  4OI5 E;  1PE5 A;  3DNZ A;  4MXJ E;  5DPF E;  2WI0 A;  5DPE E;  1KS7 A;  2TLX A;  5JXN E;  1LNC E;  1FJV A;  1TLX A;  1THL A;  1ESP A;  3QH5 A;  3FLF A;  3DO2 A;  3QGO A; 
#chains in the Genus database with same CATH homology
 4TLN A;  7TLI A;  1PE7 A;  3P7V E;  4MTW E;  5TLI A;  3DO0 A;  4OW3 A;  7TLN A;  3T8H A;  4TMN E;  2G4Z A;  1NPC A;  1Y3G E;  3T8D A;  5JS3 E;  5TMN E;  1KEI A;  1KKK A;  3T2H E;  1KL6 A;  4K89 A;  4H57 A;  1LNB E;  3FVP A;  4GER A;  2VQX A;  1FJW A;  3NQY B;  2TLI A;  3NQX A;  3P7P E;  3FBO A;  3N21 A;  5L3U E;  3FGD A;  3P7U E;  1QF2 A;  1U4G A;  1FJO A;  3MSA A;  5FXN A;  4K90 A;  4TNL A;  1QF1 A;  3T8G A;  8TLI A;  1FJT A;  5DLH A;  2TMN E;  3FCQ A;  3T8C A;  3MS3 A;  3ZI6 A;  3QH1 A;  3SSB A;  5A3Y A;  5FSS A;  5TLN A;  1FJU A;  3NN7 A;  6TMN E;  3F28 A;  5FSJ A;  1LNF E;  1KJP A;  3NQZ B;  3T87 A;  1Z9G E;  1GXW A;  3DO1 A;  3P7W E;  3P7S E;  1ZDP E;  2WHZ A;  3EIM A;  2A7G E;  3DBK A;  1LND E;  1EZM A;  1KJO A;  3FXP A;  3MSF A;  1KR6 A;  3T74 A;  3P7R E;  5JVI E;  3P7T E;  4N4E E;  1FJ3 A;  1L3F E;  1LML A;  3F2P A;  4D9W A;  4N5P E;  5K7T A;  3FOR A;  1QF0 A;  3T8F A;  3T2I E;  1KRO A;  3FB0 A;  1PE8 A;  1BQB A;  1TLI A;  3LS7 A;  3P7Q E;  4MWP E;  5L41 E;  4B52 A;  1FJQ A;  3TMN E;  5HQD A;  5JSS E;  5FSP A;  4MZN E;  3FV4 A;  8TLN E;  1TLP E;  1OS0 A;  4N66 E;  5LWD E;  1HYT A;  3MSN A;  5JT9 E;  6TLI A;  1LNE E;  5LIF E;  1KTO A;  3TLI A;  4D91 A;  1TMN E;  4M65 A;  5L8P E;  3FXS A;  3T73 A;  3T2J E;  4TLI A;  1LNA E;  4OI5 E;  1PE5 A;  3DNZ A;  4MXJ E;  5DPF E;  2WI0 A;  5DPE E;  1KS7 A;  2TLX A;  5JXN E;  1LNC E;  1FJV A;  1TLX A;  1THL A;  1ESP A;  3QH5 A;  3FLF A;  3DO2 A;  3QGO A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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