1ZJDB

Crystal structure of the catalytic domain of coagulation factor xi in complex with kunitz protease inhibitor domain of protease nexin ii
Total Genus 8

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
8
sequence length
57
structure length
57
Chain Sequence
EVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNNFDTEEYCMAVCGSAI

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTI1 (3-6)AH1 (48-55)TIV3 (41-44)O5 (5-55)S1 (18-24)S2 (29-35)TIV2 (24-27)O1 (40-58)Updating...
connected with : NaN
molecule tags Hydrolase, blood clotting
source organism Homo sapiens
publication title Structural and Mutational Analyses of the Molecular Interactions between the Catalytic Domain of Factor XIa and the Kunitz Protease Inhibitor Domain of Protease Nexin 2
pubmed doi rcsb
molecule keywords Catalytic Domain of Coagulation Factor XI
total genus 8
structure length 57
sequence length 57
ec nomenclature
pdb deposition date 2005-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00014 Kunitz_BPTI Kunitz/Bovine pancreatic trypsin inhibitor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
4.10.410.10 Few Secondary Structures Irregular Factor Xa Inhibitor Pancreatic trypsin inhibitor Kunitz domain 1zjdB00
1OA65 1FY8I 1JC6A 2DDJA 3AUIA 2FI3I 1ZR0B 2LFKA 2ZVXA 3BTWI 1YLDB 1D0DA 1EJMB 1BIKA 1DENA 1EAWB 6PTIA 3M7QB 1BZXI 1BZ5A 9PTIA 7PTIA 2PTCI 1BPTA 2M01A 3AUDA 1LD6A 3FP7J 1TAPA 1UUBA 1SHPA 2DDIA 4PTIA 1DTXA 3TGJI 1P2NB 1TPAI 2IJOI 3WNYA 1G6XA 1BHCA 3BTGI 3L3TE 1CBWD 4WWYC 1P2KI 1F5RI 3P92E 2TGPI 4TPII 2FI5I 3BYBA 1PITA 3LDJA 3GYMI 1P2MB 1P2QB 4U30W 1BTIA 5JB7A 2KCRA 1T8LB 3U1JE 4U32X 1TOCR 1JV8A 1YKTB 4BNRI 1CO7I 1T8MB 3AUBA 4WXVC 3UIRC 3OTJI 1BRCI 4ISNB 4BQDA 1JV9A 1P2OB 1UUAA 1AAPA 3BTFI 3LDIA 1T7CB 1LD5A 1CA0D 1KUNA 4ISLB 3LDMA 2LFLA 2M99A 1BPIA 4DTGK 1FAKI 1YLCB 4DG4C 3FP8I 2KAII 1KIGI 1TCPA 2UUXA 4ISOB 4NTYB 4Y0YI 1ZJDB 1B0CA 4NTWB 2ZJXA 2W8XA 3T62D 2R9PE 1KTHA 1FANA 2JOTA 1P2II 3AUEA 1T8NB 3BTDI 1T8OB 2ODYE 1IRHA 3BTMI 3OFWA 5PTIA 2TPII 1YC0I 1QLQA 3BTTI 4Y0ZI 4Y11I 3TGKI 3UOUB 3BTQI 1DTKA 5JB6A 2KNTA 1AALA 2FTMB 1OA55 3AUCA 3BTKI 3BTEI 3BTHI 2FI4I 5C67C 1D0DB 1DEMA 1BUNB 1MTND 1BTHP 2CA7A 3AUHA 3L33E 1BRBI 5JB5A 5JB4A 1ADZA 1TFXC 1BF0A 2RA3C 1KNTA 3CI7A 4Y10I 3TGII 1TAWB 8PTIA 3FP6I 1NAGA 1Y62A 2J6DA 2UUYB 2FTLI 4NTXB 3D65I 3AUGA 1K6UA 3P95E 3TPII 4BD9B 1P2JI 1F7ZI 2HEXA
chains in the Genus database with same CATH superfamily
1OA65 1FY8I 1JC6A 2DDJA 3AUIA 2FI3I 1ZR0B 2LFKA 2ZVXA 3BTWI 1YLDB 1D0DA 1EJMB 1BIKA 1DENA 1EAWB 6PTIA 3M7QB 1BZXI 1BZ5A 9PTIA 7PTIA 2PTCI 1BPTA 2M01A 3AUDA 1LD6A 3FP7J 1TAPA 1UUBA 1SHPA 2DDIA 4PTIA 1DTXA 3TGJI 1P2NB 1TPAI 2IJOI 3WNYA 1G6XA 1BHCA 3BTGI 3L3TE 1CBWD 4WWYC 1P2KI 1F5RI 3P92E 2TGPI 4TPII 2FI5I 3BYBA 1PITA 3LDJA 3GYMI 1P2MB 1P2QB 4U30W 1BTIA 5JB7A 2KCRA 1T8LB 3U1JE 4U32X 1TOCR 1JV8A 1YKTB 4BNRI 1CO7I 1T8MB 3AUBA 4WXVC 3UIRC 3OTJI 1BRCI 4ISNB 4BQDA 1JV9A 1P2OB 1UUAA 1AAPA 3BTFI 3LDIA 1T7CB 1LD5A 1CA0D 1KUNA 4ISLB 3LDMA 2LFLA 2M99A 1BPIA 4DTGK 1FAKI 1YLCB 4DG4C 3FP8I 2KAII 1KIGI 1TCPA 2UUXA 4ISOB 4NTYB 4Y0YI 1ZJDB 1B0CA 4NTWB 2ZJXA 2W8XA 3T62D 2R9PE 1KTHA 1FANA 2JOTA 1P2II 3AUEA 1T8NB 3BTDI 1T8OB 2ODYE 1IRHA 3BTMI 3OFWA 5PTIA 2TPII 1YC0I 1QLQA 3BTTI 4Y0ZI 4Y11I 3TGKI 3UOUB 3BTQI 1DTKA 5JB6A 2KNTA 1AALA 2FTMB 1OA55 3AUCA 3BTKI 3BTEI 3BTHI 2FI4I 5C67C 1D0DB 1DEMA 1BUNB 1MTND 1BTHP 2CA7A 3AUHA 3L33E 1BRBI 5JB5A 5JB4A 1ADZA 1TFXC 1BF0A 2RA3C 1KNTA 3CI7A 4Y10I 3TGII 1TAWB 8PTIA 3FP6I 1NAGA 1Y62A 2J6DA 2UUYB 2FTLI 4NTXB 3D65I 3AUGA 1K6UA 3P95E 3TPII 4BD9B 1P2JI 1F7ZI 2HEXA
chains in the Genus database with same CATH topology
1OA65 1FY8I 1JC6A 2DDJA 3AUIA 2FI3I 1ZR0B 2LFKA 2ZVXA 3BTWI 1YLDB 1D0DA 1EJMB 1BIKA 1DENA 1EAWB 6PTIA 3M7QB 1BZXI 1BZ5A 9PTIA 7PTIA 2PTCI 1BPTA 2M01A 3AUDA 1LD6A 3FP7J 1TAPA 1UUBA 1SHPA 2DDIA 4PTIA 1DTXA 3TGJI 1P2NB 1TPAI 2IJOI 3WNYA 1G6XA 1BHCA 3BTGI 3L3TE 1CBWD 4WWYC 1P2KI 1F5RI 3P92E 2TGPI 4TPII 2FI5I 3BYBA 1PITA 3LDJA 3GYMI 1P2MB 1P2QB 4U30W 1BTIA 5JB7A 2KCRA 1T8LB 3U1JE 4U32X 1TOCR 1JV8A 1YKTB 4BNRI 1CO7I 1T8MB 3AUBA 4WXVC 3UIRC 3OTJI 1BRCI 4ISNB 4BQDA 1JV9A 1P2OB 1UUAA 1AAPA 3BTFI 3LDIA 1T7CB 1LD5A 1CA0D 1KUNA 4ISLB 3LDMA 2LFLA 2M99A 1BPIA 4DTGK 1FAKI 1YLCB 4DG4C 3FP8I 2KAII 1KIGI 1TCPA 2UUXA 4ISOB 4NTYB 4Y0YI 1ZJDB 1B0CA 4NTWB 2ZJXA 2W8XA 3T62D 2R9PE 1KTHA 1FANA 2JOTA 1P2II 3AUEA 1T8NB 3BTDI 1T8OB 2ODYE 1IRHA 3BTMI 3OFWA 5PTIA 2TPII 1YC0I 1QLQA 3BTTI 4Y0ZI 4Y11I 3TGKI 3UOUB 3BTQI 1DTKA 5JB6A 2KNTA 1AALA 2FTMB 1OA55 3AUCA 3BTKI 3BTEI 3BTHI 2FI4I 5C67C 1D0DB 1DEMA 1BUNB 1MTND 1BTHP 2CA7A 3AUHA 3L33E 1BRBI 5JB5A 5JB4A 1ADZA 1TFXC 1BF0A 2RA3C 1KNTA 3CI7A 4Y10I 3TGII 1TAWB 8PTIA 3FP6I 1NAGA 1Y62A 2J6DA 2UUYB 2FTLI 4NTXB 3D65I 3AUGA 1K6UA 3P95E 3TPII 4BD9B 1P2JI 1F7ZI 2HEXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1OA6 5;  1FY8 I;  1JC6 A;  2DDJ A;  3AUI A;  2FI3 I;  1ZR0 B;  2LFK A;  2ZVX A;  3BTW I;  1YLD B;  1D0D A;  1EJM B;  1BIK A;  1DEN A;  1EAW B;  6PTI A;  3M7Q B;  1BZX I;  1BZ5 A;  9PTI A;  7PTI A;  2PTC I;  1BPT A;  2M01 A;  3AUD A;  1LD6 A;  3FP7 J;  1TAP A;  1UUB A;  1SHP A;  2DDI A;  4PTI A;  1DTX A;  3TGJ I;  1P2N B;  1TPA I;  2IJO I;  3WNY A;  1G6X A;  1BHC A;  3BTG I;  3L3T E;  1CBW D;  4WWY C;  1P2K I;  1F5R I;  3P92 E;  2TGP I;  4TPI I;  2FI5 I;  3BYB A;  1PIT A;  3LDJ A;  3GYM I;  1P2M B;  1P2Q B;  4U30 W;  1BTI A;  5JB7 A;  2KCR A;  1T8L B;  3U1J E;  4U32 X;  1TOC R;  1JV8 A;  1YKT B;  4BNR I;  1CO7 I;  1T8M B;  3AUB A;  4WXV C;  3UIR C;  3OTJ I;  1BRC I;  4ISN B;  4BQD A;  1JV9 A;  1P2O B;  1UUA A;  1AAP A;  3BTF I;  3LDI A;  1T7C B;  1LD5 A;  1CA0 D;  1KUN A;  4ISL B;  3LDM A;  2LFL A;  2M99 A;  1BPI A;  4DTG K;  1FAK I;  1YLC B;  4DG4 C;  3FP8 I;  2KAI I;  1KIG I;  1TCP A;  2UUX A;  4ISO B;  4NTY B;  4Y0Y I;  1ZJD B;  1B0C A;  4NTW B;  2ZJX A;  2W8X A;  3T62 D;  2R9P E;  1KTH A;  1FAN A;  2JOT A;  1P2I I;  3AUE A;  1T8N B;  3BTD I;  1T8O B;  2ODY E;  1IRH A;  3BTM I;  3OFW A;  5PTI A;  2TPI I;  1YC0 I;  1QLQ A;  3BTT I;  4Y0Z I;  4Y11 I;  3TGK I;  3UOU B;  3BTQ I;  1DTK A;  5JB6 A;  2KNT A;  1AAL A;  2FTM B;  1OA5 5;  3AUC A;  3BTK I;  3BTE I;  3BTH I;  2FI4 I;  5C67 C;  1D0D B;  1DEM A;  1BUN B;  1MTN D;  1BTH P;  2CA7 A;  3AUH A;  3L33 E;  1BRB I;  5JB5 A;  5JB4 A;  1ADZ A;  1TFX C;  1BF0 A;  2RA3 C;  1KNT A;  3CI7 A;  4Y10 I;  3TGI I;  1TAW B;  8PTI A;  3FP6 I;  1NAG A;  1Y62 A;  2J6D A;  2UUY B;  2FTL I;  4NTX B;  3D65 I;  3AUG A;  1K6U A;  3P95 E;  3TPI I;  4BD9 B;  1P2J I;  1F7Z I;  2HEX A; 
#chains in the Genus database with same CATH topology
 1OA6 5;  1FY8 I;  1JC6 A;  2DDJ A;  3AUI A;  2FI3 I;  1ZR0 B;  2LFK A;  2ZVX A;  3BTW I;  1YLD B;  1D0D A;  1EJM B;  1BIK A;  1DEN A;  1EAW B;  6PTI A;  3M7Q B;  1BZX I;  1BZ5 A;  9PTI A;  7PTI A;  2PTC I;  1BPT A;  2M01 A;  3AUD A;  1LD6 A;  3FP7 J;  1TAP A;  1UUB A;  1SHP A;  2DDI A;  4PTI A;  1DTX A;  3TGJ I;  1P2N B;  1TPA I;  2IJO I;  3WNY A;  1G6X A;  1BHC A;  3BTG I;  3L3T E;  1CBW D;  4WWY C;  1P2K I;  1F5R I;  3P92 E;  2TGP I;  4TPI I;  2FI5 I;  3BYB A;  1PIT A;  3LDJ A;  3GYM I;  1P2M B;  1P2Q B;  4U30 W;  1BTI A;  5JB7 A;  2KCR A;  1T8L B;  3U1J E;  4U32 X;  1TOC R;  1JV8 A;  1YKT B;  4BNR I;  1CO7 I;  1T8M B;  3AUB A;  4WXV C;  3UIR C;  3OTJ I;  1BRC I;  4ISN B;  4BQD A;  1JV9 A;  1P2O B;  1UUA A;  1AAP A;  3BTF I;  3LDI A;  1T7C B;  1LD5 A;  1CA0 D;  1KUN A;  4ISL B;  3LDM A;  2LFL A;  2M99 A;  1BPI A;  4DTG K;  1FAK I;  1YLC B;  4DG4 C;  3FP8 I;  2KAI I;  1KIG I;  1TCP A;  2UUX A;  4ISO B;  4NTY B;  4Y0Y I;  1ZJD B;  1B0C A;  4NTW B;  2ZJX A;  2W8X A;  3T62 D;  2R9P E;  1KTH A;  1FAN A;  2JOT A;  1P2I I;  3AUE A;  1T8N B;  3BTD I;  1T8O B;  2ODY E;  1IRH A;  3BTM I;  3OFW A;  5PTI A;  2TPI I;  1YC0 I;  1QLQ A;  3BTT I;  4Y0Z I;  4Y11 I;  3TGK I;  3UOU B;  3BTQ I;  1DTK A;  5JB6 A;  2KNT A;  1AAL A;  2FTM B;  1OA5 5;  3AUC A;  3BTK I;  3BTE I;  3BTH I;  2FI4 I;  5C67 C;  1D0D B;  1DEM A;  1BUN B;  1MTN D;  1BTH P;  2CA7 A;  3AUH A;  3L33 E;  1BRB I;  5JB5 A;  5JB4 A;  1ADZ A;  1TFX C;  1BF0 A;  2RA3 C;  1KNT A;  3CI7 A;  4Y10 I;  3TGI I;  1TAW B;  8PTI A;  3FP6 I;  1NAG A;  1Y62 A;  2J6D A;  2UUY B;  2FTL I;  4NTX B;  3D65 I;  3AUG A;  1K6U A;  3P95 E;  3TPI I;  4BD9 B;  1P2J I;  1F7Z I;  2HEX A; 
#chains in the Genus database with same CATH homology
 1OA6 5;  1FY8 I;  1JC6 A;  2DDJ A;  3AUI A;  2FI3 I;  1ZR0 B;  2LFK A;  2ZVX A;  3BTW I;  1YLD B;  1D0D A;  1EJM B;  1BIK A;  1DEN A;  1EAW B;  6PTI A;  3M7Q B;  1BZX I;  1BZ5 A;  9PTI A;  7PTI A;  2PTC I;  1BPT A;  2M01 A;  3AUD A;  1LD6 A;  3FP7 J;  1TAP A;  1UUB A;  1SHP A;  2DDI A;  4PTI A;  1DTX A;  3TGJ I;  1P2N B;  1TPA I;  2IJO I;  3WNY A;  1G6X A;  1BHC A;  3BTG I;  3L3T E;  1CBW D;  4WWY C;  1P2K I;  1F5R I;  3P92 E;  2TGP I;  4TPI I;  2FI5 I;  3BYB A;  1PIT A;  3LDJ A;  3GYM I;  1P2M B;  1P2Q B;  4U30 W;  1BTI A;  5JB7 A;  2KCR A;  1T8L B;  3U1J E;  4U32 X;  1TOC R;  1JV8 A;  1YKT B;  4BNR I;  1CO7 I;  1T8M B;  3AUB A;  4WXV C;  3UIR C;  3OTJ I;  1BRC I;  4ISN B;  4BQD A;  1JV9 A;  1P2O B;  1UUA A;  1AAP A;  3BTF I;  3LDI A;  1T7C B;  1LD5 A;  1CA0 D;  1KUN A;  4ISL B;  3LDM A;  2LFL A;  2M99 A;  1BPI A;  4DTG K;  1FAK I;  1YLC B;  4DG4 C;  3FP8 I;  2KAI I;  1KIG I;  1TCP A;  2UUX A;  4ISO B;  4NTY B;  4Y0Y I;  1ZJD B;  1B0C A;  4NTW B;  2ZJX A;  2W8X A;  3T62 D;  2R9P E;  1KTH A;  1FAN A;  2JOT A;  1P2I I;  3AUE A;  1T8N B;  3BTD I;  1T8O B;  2ODY E;  1IRH A;  3BTM I;  3OFW A;  5PTI A;  2TPI I;  1YC0 I;  1QLQ A;  3BTT I;  4Y0Z I;  4Y11 I;  3TGK I;  3UOU B;  3BTQ I;  1DTK A;  5JB6 A;  2KNT A;  1AAL A;  2FTM B;  1OA5 5;  3AUC A;  3BTK I;  3BTE I;  3BTH I;  2FI4 I;  5C67 C;  1D0D B;  1DEM A;  1BUN B;  1MTN D;  1BTH P;  2CA7 A;  3AUH A;  3L33 E;  1BRB I;  5JB5 A;  5JB4 A;  1ADZ A;  1TFX C;  1BF0 A;  2RA3 C;  1KNT A;  3CI7 A;  4Y10 I;  3TGI I;  1TAW B;  8PTI A;  3FP6 I;  1NAG A;  1Y62 A;  2J6D A;  2UUY B;  2FTL I;  4NTX B;  3D65 I;  3AUG A;  1K6U A;  3P95 E;  3TPI I;  4BD9 B;  1P2J I;  1F7Z I;  2HEX A; 
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