1KUN | Genus

Total Genus 14

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	14
sequence length	58
structure length	58
Chain Sequence	ETDICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQKECEKVCAPV

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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The Resolver thinks Pdb

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reading 58 atoms

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58 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Extracellular matrix
source organism	Homo sapiens
publication title	Solution structure and backbone dynamics of the human alpha3-chain type VI collagen C-terminal Kunitz domain,. pubmed doi rcsb
molecule keywords	ALPHA3-CHAIN TYPE VI COLLAGEN
total genus	14
structure length	58
sequence length	58
ec nomenclature
pdb deposition date	1997-03-04

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00014	Kunitz_BPTI	Kunitz/Bovine pancreatic trypsin inhibitor domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
4.10.410.10	Few Secondary Structures	Irregular	Factor Xa Inhibitor	Pancreatic trypsin inhibitor Kunitz domain	1kunA00

1F5RI 2FI4I 1YC0I 1EJMB 1BZ5A 1G6XA 1UUAA 1ZJDB 1P2QB 3BTWI 5PTIA 2PTCI 3CI7A 1BPTA 5JB5A 6PTIA 1DTKA 1P2JI 1B0CA 2RA3C 1IRHA 2J6DA 4ISOB 3LDIA 5JB6A 3AUDA 1KIGI 1EAWB 5JB7A 2DDIA 3TPII 3TGJI 2UUXA 1MTND 4BD9B 4NTYB 2IJOI 3BTHI 7PTIA 1CBWD 3AUGA 4U32X 1P2NB 3FP7J 2FTMB 2HEXA 2FI5I 4Y10I 1TOCR 1FANA 4DG4C 1LD5A 2TGPI 3D65I 1YLDB 2FI3I 3GYMI 2DDJA 3P95E 3FP8I 4ISNB 1F7ZI 1T8OB 3AUIA 2UUYB 3P92E 3BTQI 1TCPA 3T62D 3BTKI 4PTIA 3M7QB 1KNTA 2ZJXA 1BRBI 3AUCA 1KUNA 1KTHA 3BTFI 2M01A 2R9PE 2M99A 4Y0YI 5C67C 4Y0ZI 1DENA 1K6UA 3BYBA 2ODYE 1YKTB 1T8NB 3TGKI 3L33E 9PTIA 1P2II 3U1JE 1CA0D 1BUNB 1P2OB 1PITA 1SHPA 3BTMI 1T8LB 1UUBA 1NAGA 2JOTA 2KAII 1BTHP 1OA55 3TGII 2FTLI 1JV8A 1ADZA 3L3TE 1BZXI 1Y62A 3WNYA 5JB4A 1BRCI 4Y11I 3UIRC 1BTIA 3BTEI 2ZVXA 1ZR0B 1OA65 2TPII 3AUEA 4DTGK 1CO7I 1BIKA 1D0DB 1JC6A 1AAPA 3OTJI 1QLQA 1BHCA 4BNRI 3BTTI 1LD6A 4TPII 1D0DA 3BTDI 8PTIA 4WXVC 3AUBA 4BQDA 1BF0A 1DEMA 3AUHA 4NTWB 1TFXC 1TAPA 1T8MB 1AALA 1P2KI 2KCRA 1TPAI 1T7CB 3FP6I 4U30W 1FAKI 3OFWA 1BPIA 2W8XA 4NTXB 2LFLA 2KNTA 1DTXA 1FY8I 3UOUB 3LDJA 3BTGI 4ISLB 2LFKA 1TAWB 1JV9A 3LDMA 4WWYC 1YLCB 2CA7A 1P2MB
chains in the Genus database with same CATH superfamily

#chains in the Genus database with same CATH superfamily
 1F5R I;  2FI4 I;  1YC0 I;  1EJM B;  1BZ5 A;  1G6X A;  1UUA A;  1ZJD B;  1P2Q B;  3BTW I;  5PTI A;  2PTC I;  3CI7 A;  1BPT A;  5JB5 A;  6PTI A;  1DTK A;  1P2J I;  1B0C A;  2RA3 C;  1IRH A;  2J6D A;  4ISO B;  3LDI A;  5JB6 A;  3AUD A;  1KIG I;  1EAW B;  5JB7 A;  2DDI A;  3TPI I;  3TGJ I;  2UUX A;  1MTN D;  4BD9 B;  4NTY B;  2IJO I;  3BTH I;  7PTI A;  1CBW D;  3AUG A;  4U32 X;  1P2N B;  3FP7 J;  2FTM B;  2HEX A;  2FI5 I;  4Y10 I;  1TOC R;  1FAN A;  4DG4 C;  1LD5 A;  2TGP I;  3D65 I;  1YLD B;  2FI3 I;  3GYM I;  2DDJ A;  3P95 E;  3FP8 I;  4ISN B;  1F7Z I;  1T8O B;  3AUI A;  2UUY B;  3P92 E;  3BTQ I;  1TCP A;  3T62 D;  3BTK I;  4PTI A;  3M7Q B;  1KNT A;  2ZJX A;  1BRB I;  3AUC A;  1KUN A;  1KTH A;  3BTF I;  2M01 A;  2R9P E;  2M99 A;  4Y0Y I;  5C67 C;  4Y0Z I;  1DEN A;  1K6U A;  3BYB A;  2ODY E;  1YKT B;  1T8N B;  3TGK I;  3L33 E;  9PTI A;  1P2I I;  3U1J E;  1CA0 D;  1BUN B;  1P2O B;  1PIT A;  1SHP A;  3BTM I;  1T8L B;  1UUB A;  1NAG A;  2JOT A;  2KAI I;  1BTH P;  1OA5 5;  3TGI I;  2FTL I;  1JV8 A;  1ADZ A;  3L3T E;  1BZX I;  1Y62 A;  3WNY A;  5JB4 A;  1BRC I;  4Y11 I;  3UIR C;  1BTI A;  3BTE I;  2ZVX A;  1ZR0 B;  1OA6 5;  2TPI I;  3AUE A;  4DTG K;  1CO7 I;  1BIK A;  1D0D B;  1JC6 A;  1AAP A;  3OTJ I;  1QLQ A;  1BHC A;  4BNR I;  3BTT I;  1LD6 A;  4TPI I;  1D0D A;  3BTD I;  8PTI A;  4WXV C;  3AUB A;  4BQD A;  1BF0 A;  1DEM A;  3AUH A;  4NTW B;  1TFX C;  1TAP A;  1T8M B;  1AAL A;  1P2K I;  2KCR A;  1TPA I;  1T7C B;  3FP6 I;  4U30 W;  1FAK I;  3OFW A;  1BPI A;  2W8X A;  4NTX B;  2LFL A;  2KNT A;  1DTX A;  1FY8 I;  3UOU B;  3LDJ A;  3BTG I;  4ISL B;  2LFK A;  1TAW B;  1JV9 A;  3LDM A;  4WWY C;  1YLC B;  2CA7 A;  1P2M B; 
#chains in the Genus database with same CATH topology
 1F5R I;  2FI4 I;  1YC0 I;  1EJM B;  1BZ5 A;  1G6X A;  1UUA A;  1ZJD B;  1P2Q B;  3BTW I;  5PTI A;  2PTC I;  3CI7 A;  1BPT A;  5JB5 A;  6PTI A;  1DTK A;  1P2J I;  1B0C A;  2RA3 C;  1IRH A;  2J6D A;  4ISO B;  3LDI A;  5JB6 A;  3AUD A;  1KIG I;  1EAW B;  5JB7 A;  2DDI A;  3TPI I;  3TGJ I;  2UUX A;  1MTN D;  4BD9 B;  4NTY B;  2IJO I;  3BTH I;  7PTI A;  1CBW D;  3AUG A;  4U32 X;  1P2N B;  3FP7 J;  2FTM B;  2HEX A;  2FI5 I;  4Y10 I;  1TOC R;  1FAN A;  4DG4 C;  1LD5 A;  2TGP I;  3D65 I;  1YLD B;  2FI3 I;  3GYM I;  2DDJ A;  3P95 E;  3FP8 I;  4ISN B;  1F7Z I;  1T8O B;  3AUI A;  2UUY B;  3P92 E;  3BTQ I;  1TCP A;  3T62 D;  3BTK I;  4PTI A;  3M7Q B;  1KNT A;  2ZJX A;  1BRB I;  3AUC A;  1KUN A;  1KTH A;  3BTF I;  2M01 A;  2R9P E;  2M99 A;  4Y0Y I;  5C67 C;  4Y0Z I;  1DEN A;  1K6U A;  3BYB A;  2ODY E;  1YKT B;  1T8N B;  3TGK I;  3L33 E;  9PTI A;  1P2I I;  3U1J E;  1CA0 D;  1BUN B;  1P2O B;  1PIT A;  1SHP A;  3BTM I;  1T8L B;  1UUB A;  1NAG A;  2JOT A;  2KAI I;  1BTH P;  1OA5 5;  3TGI I;  2FTL I;  1JV8 A;  1ADZ A;  3L3T E;  1BZX I;  1Y62 A;  3WNY A;  5JB4 A;  1BRC I;  4Y11 I;  3UIR C;  1BTI A;  3BTE I;  2ZVX A;  1ZR0 B;  1OA6 5;  2TPI I;  3AUE A;  4DTG K;  1CO7 I;  1BIK A;  1D0D B;  1JC6 A;  1AAP A;  3OTJ I;  1QLQ A;  1BHC A;  4BNR I;  3BTT I;  1LD6 A;  4TPI I;  1D0D A;  3BTD I;  8PTI A;  4WXV C;  3AUB A;  4BQD A;  1BF0 A;  1DEM A;  3AUH A;  4NTW B;  1TFX C;  1TAP A;  1T8M B;  1AAL A;  1P2K I;  2KCR A;  1TPA I;  1T7C B;  3FP6 I;  4U30 W;  1FAK I;  3OFW A;  1BPI A;  2W8X A;  4NTX B;  2LFL A;  2KNT A;  1DTX A;  1FY8 I;  3UOU B;  3LDJ A;  3BTG I;  4ISL B;  2LFK A;  1TAW B;  1JV9 A;  3LDM A;  4WWY C;  1YLC B;  2CA7 A;  1P2M B; 
#chains in the Genus database with same CATH homology
 1F5R I;  2FI4 I;  1YC0 I;  1EJM B;  1BZ5 A;  1G6X A;  1UUA A;  1ZJD B;  1P2Q B;  3BTW I;  5PTI A;  2PTC I;  3CI7 A;  1BPT A;  5JB5 A;  6PTI A;  1DTK A;  1P2J I;  1B0C A;  2RA3 C;  1IRH A;  2J6D A;  4ISO B;  3LDI A;  5JB6 A;  3AUD A;  1KIG I;  1EAW B;  5JB7 A;  2DDI A;  3TPI I;  3TGJ I;  2UUX A;  1MTN D;  4BD9 B;  4NTY B;  2IJO I;  3BTH I;  7PTI A;  1CBW D;  3AUG A;  4U32 X;  1P2N B;  3FP7 J;  2FTM B;  2HEX A;  2FI5 I;  4Y10 I;  1TOC R;  1FAN A;  4DG4 C;  1LD5 A;  2TGP I;  3D65 I;  1YLD B;  2FI3 I;  3GYM I;  2DDJ A;  3P95 E;  3FP8 I;  4ISN B;  1F7Z I;  1T8O B;  3AUI A;  2UUY B;  3P92 E;  3BTQ I;  1TCP A;  3T62 D;  3BTK I;  4PTI A;  3M7Q B;  1KNT A;  2ZJX A;  1BRB I;  3AUC A;  1KUN A;  1KTH A;  3BTF I;  2M01 A;  2R9P E;  2M99 A;  4Y0Y I;  5C67 C;  4Y0Z I;  1DEN A;  1K6U A;  3BYB A;  2ODY E;  1YKT B;  1T8N B;  3TGK I;  3L33 E;  9PTI A;  1P2I I;  3U1J E;  1CA0 D;  1BUN B;  1P2O B;  1PIT A;  1SHP A;  3BTM I;  1T8L B;  1UUB A;  1NAG A;  2JOT A;  2KAI I;  1BTH P;  1OA5 5;  3TGI I;  2FTL I;  1JV8 A;  1ADZ A;  3L3T E;  1BZX I;  1Y62 A;  3WNY A;  5JB4 A;  1BRC I;  4Y11 I;  3UIR C;  1BTI A;  3BTE I;  2ZVX A;  1ZR0 B;  1OA6 5;  2TPI I;  3AUE A;  4DTG K;  1CO7 I;  1BIK A;  1D0D B;  1JC6 A;  1AAP A;  3OTJ I;  1QLQ A;  1BHC A;  4BNR I;  3BTT I;  1LD6 A;  4TPI I;  1D0D A;  3BTD I;  8PTI A;  4WXV C;  3AUB A;  4BQD A;  1BF0 A;  1DEM A;  3AUH A;  4NTW B;  1TFX C;  1TAP A;  1T8M B;  1AAL A;  1P2K I;  2KCR A;  1TPA I;  1T7C B;  3FP6 I;  4U30 W;  1FAK I;  3OFW A;  1BPI A;  2W8X A;  4NTX B;  2LFL A;  2KNT A;  1DTX A;  1FY8 I;  3UOU B;  3LDJ A;  3BTG I;  4ISL B;  2LFK A;  1TAW B;  1JV9 A;  3LDM A;  4WWY C;  1YLC B;  2CA7 A;  1P2M B;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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1KUNA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations