2JFRA

Crystal structure of the ppm ser-thr phosphatase mspp from mycobacterium smegmatis in complex with phosphate at 0.83 a resolution
Total Genus 76
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
76
sequence length
234
structure length
234
Chain Sequence
GMASVLSAATATDQGPVRENNQDACLADGILYAVADGFGARGHHASATALKTLSAGFAAAPDRDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITRHEARWHPQRHLLTRALGIGPHIGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAATSPDPQVAVRRLVEVANDAGGSDNTTVVVIDLG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Insights Into the Mechanism of Ppm Ser/Thr Phosphatases from the Atomic Resolution Structures of a Mycobacterial Enzyme
pubmed doi rcsb
molecule tags Hydrolase
source organism Mycobacterium smegmatis
molecule keywords SER-THR PHOSPHATASE MSPP
total genus 76
structure length 234
sequence length 234
ec nomenclature
pdb deposition date 2007-02-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13672 PP2C_2 Protein phosphatase 2C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 2jfrA00
3FXLA 3ES2A 3F79A 4RAFA 3T91A 5ITIA 3ZT9A 3UJGB 4OICB 2I44A 3EQ2A 2POMA 4N0GA 3W43A 3NMNB 3D8KA 3RT0A 1A6QA 3MQ3A 2Y09A 2JFSA 3W45A 3FXKA 5JO2B 5D2UA 1TXOA 2P8EA 2JFTA 4LA7B 3UJLB 4LGAB 2I0OA 2XZVA 2J82A 3T9QA 2JFRA 2IRMA 4JNDA 2IQ1A 4YZGA 3JRQA 3FXMA 4RAGA 2ISNA 5F1MA 3ZVUB 3FXOA 2J86A 3RNRA 2J4OA 3N3CA 4DA1A 4RA2A 2PK0A 3PU9A 4LG5B 4WVOB 2POPA 3FXJA 4DS8B 4YZHA 3UJKA 3KB3B 3NMVB 3W44A 3W42A 3KDJB 3QN1B 2CM1A 3NMTB 2V06A 4LGBB 3W40A 5JO1B 3W41A 3KE6A 2PNQA
chains in the Genus database with same CATH superfamily
3FXLA 3ES2A 3F79A 4RAFA 3T91A 5ITIA 3ZT9A 3UJGB 4OICB 2I44A 3EQ2A 2POMA 4N0GA 3W43A 3NMNB 3D8KA 3RT0A 1A6QA 3MQ3A 2Y09A 2JFSA 3W45A 3FXKA 5JO2B 5D2UA 1TXOA 2P8EA 2JFTA 4LA7B 3UJLB 4LGAB 2I0OA 2XZVA 2J82A 3T9QA 2JFRA 2IRMA 4JNDA 2IQ1A 4YZGA 3JRQA 3FXMA 4RAGA 2ISNA 5F1MA 3ZVUB 3FXOA 4IIPA 2J86A 3RNRA 2J4OA 3N3CA 4DA1A 4RA2A 2PK0A 3PU9A 4LG5B 4WVOB 2POPA 3FXJA 4DS8B 4YZHA 3UJKA 3KB3B 3NMVB 3W44A 3W42A 4IIKA 3KDJB 3QN1B 2CM1A 3NMTB 2V06A 4LGBB 3W40A 5JO1B 3W41A 3KE6A 2PNQA
chains in the Genus database with same CATH topology
3FXLA 3ES2A 3F79A 4RAFA 3T91A 5ITIA 3ZT9A 3UJGB 4OICB 2I44A 3EQ2A 2POMA 4N0GA 3W43A 3NMNB 3D8KA 3RT0A 1A6QA 3MQ3A 2Y09A 2JFSA 3W45A 3FXKA 5JO2B 5D2UA 1TXOA 2P8EA 2JFTA 4LA7B 3UJLB 4LGAB 2I0OA 2XZVA 2J82A 3T9QA 2JFRA 2IRMA 4JNDA 2IQ1A 4YZGA 3JRQA 3FXMA 4RAGA 2ISNA 5F1MA 3ZVUB 3FXOA 2J86A 3RNRA 2J4OA 3N3CA 4DA1A 4RA2A 2PK0A 3PU9A 4LG5B 4WVOB 2POPA 3FXJA 4DS8B 4YZHA 3UJKA 3KB3B 3NMVB 3W44A 3W42A 3KDJB 3QN1B 2CM1A 3NMTB 2V06A 4LGBB 3W40A 5JO1B 3W41A 3KE6A 2PNQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FXL A;  3ES2 A;  3F79 A;  4RAF A;  3T91 A;  5ITI A;  3ZT9 A;  3UJG B;  4OIC B;  2I44 A;  3EQ2 A;  2POM A;  4N0G A;  3W43 A;  3NMN B;  3D8K A;  3RT0 A;  1A6Q A;  3MQ3 A;  2Y09 A;  2JFS A;  3W45 A;  3FXK A;  5JO2 B;  5D2U A;  1TXO A;  2P8E A;  2JFT A;  4LA7 B;  3UJL B;  4LGA B;  2I0O A;  2XZV A;  2J82 A;  3T9Q A;  2JFR A;  2IRM A;  4JND A;  2IQ1 A;  4YZG A;  3JRQ A;  3FXM A;  4RAG A;  2ISN A;  5F1M A;  3ZVU B;  3FXO A;  2J86 A;  3RNR A;  2J4O A;  3N3C A;  4DA1 A;  4RA2 A;  2PK0 A;  3PU9 A;  4LG5 B;  4WVO B;  2POP A;  3FXJ A;  4DS8 B;  4YZH A;  3UJK A;  3KB3 B;  3NMV B;  3W44 A;  3W42 A;  3KDJ B;  3QN1 B;  2CM1 A;  3NMT B;  2V06 A;  4LGB B;  3W40 A;  5JO1 B;  3W41 A;  3KE6 A;  2PNQ A; 
#chains in the Genus database with same CATH topology
 3FXL A;  3ES2 A;  3F79 A;  4RAF A;  3T91 A;  5ITI A;  3ZT9 A;  3UJG B;  4OIC B;  2I44 A;  3EQ2 A;  2POM A;  4N0G A;  3W43 A;  3NMN B;  3D8K A;  3RT0 A;  1A6Q A;  3MQ3 A;  2Y09 A;  2JFS A;  3W45 A;  3FXK A;  5JO2 B;  5D2U A;  1TXO A;  2P8E A;  2JFT A;  4LA7 B;  3UJL B;  4LGA B;  2I0O A;  2XZV A;  2J82 A;  3T9Q A;  2JFR A;  2IRM A;  4JND A;  2IQ1 A;  4YZG A;  3JRQ A;  3FXM A;  4RAG A;  2ISN A;  5F1M A;  3ZVU B;  3FXO A;  4IIP A;  2J86 A;  3RNR A;  2J4O A;  3N3C A;  4DA1 A;  4RA2 A;  2PK0 A;  3PU9 A;  4LG5 B;  4WVO B;  2POP A;  3FXJ A;  4DS8 B;  4YZH A;  3UJK A;  3KB3 B;  3NMV B;  3W44 A;  3W42 A;  4IIK A;  3KDJ B;  3QN1 B;  2CM1 A;  3NMT B;  2V06 A;  4LGB B;  3W40 A;  5JO1 B;  3W41 A;  3KE6 A;  2PNQ A; 
#chains in the Genus database with same CATH homology
 3FXL A;  3ES2 A;  3F79 A;  4RAF A;  3T91 A;  5ITI A;  3ZT9 A;  3UJG B;  4OIC B;  2I44 A;  3EQ2 A;  2POM A;  4N0G A;  3W43 A;  3NMN B;  3D8K A;  3RT0 A;  1A6Q A;  3MQ3 A;  2Y09 A;  2JFS A;  3W45 A;  3FXK A;  5JO2 B;  5D2U A;  1TXO A;  2P8E A;  2JFT A;  4LA7 B;  3UJL B;  4LGA B;  2I0O A;  2XZV A;  2J82 A;  3T9Q A;  2JFR A;  2IRM A;  4JND A;  2IQ1 A;  4YZG A;  3JRQ A;  3FXM A;  4RAG A;  2ISN A;  5F1M A;  3ZVU B;  3FXO A;  2J86 A;  3RNR A;  2J4O A;  3N3C A;  4DA1 A;  4RA2 A;  2PK0 A;  3PU9 A;  4LG5 B;  4WVO B;  2POP A;  3FXJ A;  4DS8 B;  4YZH A;  3UJK A;  3KB3 B;  3NMV B;  3W44 A;  3W42 A;  3KDJ B;  3QN1 B;  2CM1 A;  3NMT B;  2V06 A;  4LGB B;  3W40 A;  5JO1 B;  3W41 A;  3KE6 A;  2PNQ A; 
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