2JFSA

Crystal structure of the ppm ser-thr phosphatase mspp from mycobacterium smegmatis in complex with cacodylate
Total Genus 73

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
73
sequence length
232
structure length
232
Chain Sequence
ASVLSAATATDQGPVRENNQDACLADGILYAVADGFGARGHHASATALKTLSAGFAAAPDRDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITRHEARWHPQRHLLTRALGIGPHIGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAATSPDPQVAVRRLVEVANDAGGSDNTTVVVIDLG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH5 (205-219)S1 (4-12)TIV1 (14-17)EMPTYS2 (22-27)TII'1 (27-30)AH1 (40-58)S4 (88-95)S3 (30-37)TVIII1 (83-86)O1 (59-61)3H1 (99-101)TIV3 (155-158)S5 (105-109)S8 (168-171)S6 (114-118)S7 (121-124)TIV2 (117-120)TII2 (175-178)TI2 (149-152)TI3 (151-154)AH3 (131-138)3H2 (144-146)TI1 (146-149)3H3 (185-188)S9 (178-183)TVIII3 (202-205)AH4 (193-201)S10 (225-232)AH2 (62-81)TII1 (158-161)TVIII2 (139-142)TIV4 (188-191)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Mycobacterium smegmatis
publication title Insights Into the Mechanism of Ppm Ser/Thr Phosphatases from the Atomic Resolution Structures of a Mycobacterial Enzyme
pubmed doi rcsb
molecule keywords SER-THR PHOSPHATASE MSPP
total genus 73
structure length 232
sequence length 232
ec nomenclature
pdb deposition date 2007-02-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13672 PP2C_2 Protein phosphatase 2C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 2jfsA00
3FXOA 2ISNA 3W44A 4YZHA 4RAFA 4LGBB 3F79A 3W43A 2V06A 3RT0A 2POPA 3KDJB 3QN1B 2J86A 3NMNB 2P8EA 4LA7B 2XZVA 3KB3B 1A6QA 4JNDA 2CM1A 3MQ3A 5F1MA 3KE6A 3ZT9A 3FXKA 3UJKA 3EQ2A 4DS8B 2I0OA 4WVOB 2JFSA 3D8KA 5ITIA 3RNRA 4LG5B 3W41A 2JFTA 3W45A 3FXJA 2I44A 2PK0A 4N0GA 3UJLB 3ZVUB 4YZGA 5JO1B 2J4OA 4RA2A 2Y09A 4OICB 2PNQA 3JRQA 3NMTB 2POMA 4LGAB 2IQ1A 4DA1A 4RAGA 3FXMA 3UJGB 3T9QA 3T91A 2J82A 3N3CA 2JFRA 3PU9A 1TXOA 3NMVB 5JO2B 2IRMA 3W42A 3W40A 3FXLA 3ES2A 5D2UA
chains in the Genus database with same CATH superfamily
3FXOA 2ISNA 3W44A 4YZHA 4RAFA 4LGBB 3F79A 3W43A 2V06A 3RT0A 2POPA 3KDJB 3QN1B 2J86A 3NMNB 2P8EA 4LA7B 2XZVA 3KB3B 1A6QA 4JNDA 2CM1A 3MQ3A 5F1MA 3KE6A 3ZT9A 3FXKA 3UJKA 3EQ2A 4DS8B 4IIPA 2I0OA 4WVOB 2JFSA 3D8KA 5ITIA 3RNRA 4LG5B 3W41A 2JFTA 3W45A 3FXJA 2I44A 2PK0A 4N0GA 3UJLB 3ZVUB 4YZGA 5JO1B 2J4OA 4RA2A 2Y09A 4OICB 2PNQA 3JRQA 3NMTB 2POMA 4LGAB 2IQ1A 4DA1A 4RAGA 3FXMA 3UJGB 3T9QA 3T91A 2J82A 3N3CA 2JFRA 3PU9A 1TXOA 4IIKA 3NMVB 5JO2B 2IRMA 3W42A 3W40A 3FXLA 3ES2A 5D2UA
chains in the Genus database with same CATH topology
3FXOA 2ISNA 3W44A 4YZHA 4RAFA 4LGBB 3F79A 3W43A 2V06A 3RT0A 2POPA 3KDJB 3QN1B 2J86A 3NMNB 2P8EA 4LA7B 2XZVA 3KB3B 1A6QA 4JNDA 2CM1A 3MQ3A 5F1MA 3KE6A 3ZT9A 3FXKA 3UJKA 3EQ2A 4DS8B 2I0OA 4WVOB 2JFSA 3D8KA 5ITIA 3RNRA 4LG5B 3W41A 2JFTA 3W45A 3FXJA 2I44A 2PK0A 4N0GA 3UJLB 3ZVUB 4YZGA 5JO1B 2J4OA 4RA2A 2Y09A 4OICB 2PNQA 3JRQA 3NMTB 2POMA 4LGAB 2IQ1A 4DA1A 4RAGA 3FXMA 3UJGB 3T9QA 3T91A 2J82A 3N3CA 2JFRA 3PU9A 1TXOA 3NMVB 5JO2B 2IRMA 3W42A 3W40A 3FXLA 3ES2A 5D2UA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FXO A;  2ISN A;  3W44 A;  4YZH A;  4RAF A;  4LGB B;  3F79 A;  3W43 A;  2V06 A;  3RT0 A;  2POP A;  3KDJ B;  3QN1 B;  2J86 A;  3NMN B;  2P8E A;  4LA7 B;  2XZV A;  3KB3 B;  1A6Q A;  4JND A;  2CM1 A;  3MQ3 A;  5F1M A;  3KE6 A;  3ZT9 A;  3FXK A;  3UJK A;  3EQ2 A;  4DS8 B;  2I0O A;  4WVO B;  2JFS A;  3D8K A;  5ITI A;  3RNR A;  4LG5 B;  3W41 A;  2JFT A;  3W45 A;  3FXJ A;  2I44 A;  2PK0 A;  4N0G A;  3UJL B;  3ZVU B;  4YZG A;  5JO1 B;  2J4O A;  4RA2 A;  2Y09 A;  4OIC B;  2PNQ A;  3JRQ A;  3NMT B;  2POM A;  4LGA B;  2IQ1 A;  4DA1 A;  4RAG A;  3FXM A;  3UJG B;  3T9Q A;  3T91 A;  2J82 A;  3N3C A;  2JFR A;  3PU9 A;  1TXO A;  3NMV B;  5JO2 B;  2IRM A;  3W42 A;  3W40 A;  3FXL A;  3ES2 A;  5D2U A; 
#chains in the Genus database with same CATH topology
 3FXO A;  2ISN A;  3W44 A;  4YZH A;  4RAF A;  4LGB B;  3F79 A;  3W43 A;  2V06 A;  3RT0 A;  2POP A;  3KDJ B;  3QN1 B;  2J86 A;  3NMN B;  2P8E A;  4LA7 B;  2XZV A;  3KB3 B;  1A6Q A;  4JND A;  2CM1 A;  3MQ3 A;  5F1M A;  3KE6 A;  3ZT9 A;  3FXK A;  3UJK A;  3EQ2 A;  4DS8 B;  4IIP A;  2I0O A;  4WVO B;  2JFS A;  3D8K A;  5ITI A;  3RNR A;  4LG5 B;  3W41 A;  2JFT A;  3W45 A;  3FXJ A;  2I44 A;  2PK0 A;  4N0G A;  3UJL B;  3ZVU B;  4YZG A;  5JO1 B;  2J4O A;  4RA2 A;  2Y09 A;  4OIC B;  2PNQ A;  3JRQ A;  3NMT B;  2POM A;  4LGA B;  2IQ1 A;  4DA1 A;  4RAG A;  3FXM A;  3UJG B;  3T9Q A;  3T91 A;  2J82 A;  3N3C A;  2JFR A;  3PU9 A;  1TXO A;  4IIK A;  3NMV B;  5JO2 B;  2IRM A;  3W42 A;  3W40 A;  3FXL A;  3ES2 A;  5D2U A; 
#chains in the Genus database with same CATH homology
 3FXO A;  2ISN A;  3W44 A;  4YZH A;  4RAF A;  4LGB B;  3F79 A;  3W43 A;  2V06 A;  3RT0 A;  2POP A;  3KDJ B;  3QN1 B;  2J86 A;  3NMN B;  2P8E A;  4LA7 B;  2XZV A;  3KB3 B;  1A6Q A;  4JND A;  2CM1 A;  3MQ3 A;  5F1M A;  3KE6 A;  3ZT9 A;  3FXK A;  3UJK A;  3EQ2 A;  4DS8 B;  2I0O A;  4WVO B;  2JFS A;  3D8K A;  5ITI A;  3RNR A;  4LG5 B;  3W41 A;  2JFT A;  3W45 A;  3FXJ A;  2I44 A;  2PK0 A;  4N0G A;  3UJL B;  3ZVU B;  4YZG A;  5JO1 B;  2J4O A;  4RA2 A;  2Y09 A;  4OIC B;  2PNQ A;  3JRQ A;  3NMT B;  2POM A;  4LGA B;  2IQ1 A;  4DA1 A;  4RAG A;  3FXM A;  3UJG B;  3T9Q A;  3T91 A;  2J82 A;  3N3C A;  2JFR A;  3PU9 A;  1TXO A;  3NMV B;  5JO2 B;  2IRM A;  3W42 A;  3W40 A;  3FXL A;  3ES2 A;  5D2U A; 
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