2JFTA

Crystal structure of the ppm ser-thr phosphatase mspp from mycobacterium smegmatis in complex with sulfate
Total Genus 75

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
75
sequence length
234
structure length
234
Chain Sequence
GMASVLSAATATDQGPVRENNQDACLADGILYAVADGFGARGHHASATALKTLSAGFAAAPDRDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEITRHEARWHPQRHLLTRALGIGPHIGPDVFGIDCGPGDRLLISSDGLFAAADEALIVDAATSPDPQVAVRRLVEVANDAGGSDNTTVVVIDLG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
3H1 (99-101)S1 (4-12)S10 (225-232)TIV1 (14-17)3H2 (185-188)S2 (22-27)S3 (30-37)TII'1 (27-30)EMPTYAH1 (40-58)TVIII2 (83-86)S4 (88-95)AH2 (62-81)O1 (59-61)TII1 (158-161)S5 (105-109)S6 (114-118)S7 (121-124)TIV2 (117-120)S9 (178-183)S8 (168-171)AH3 (131-138)TIV4 (188-191)TI1 (149-152)TI2 (151-154)TIV3 (155-158)TII2 (175-178)AH5 (193-201)AH6 (205-219)TVIII3 (202-205)AH4 (143-147)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Mycobacterium smegmatis
publication title Insights Into the Mechanism of Ppm Ser/Thr Phosphatases from the Atomic Resolution Structures of a Mycobacterial Enzyme
pubmed doi rcsb
molecule keywords SER-THR PHOSPHATASE MSPP
total genus 75
structure length 234
sequence length 234
ec nomenclature
pdb deposition date 2007-02-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13672 PP2C_2 Protein phosphatase 2C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 2jftA00
4WVOB 3T9QA 3MQ3A 2POMA 2XZVA 3EQ2A 3UJKA 4DA1A 4OICB 2J4OA 3NMVB 3NMTB 4YZHA 4LGBB 5JO2B 3FXKA 3UJGB 5JO1B 3N3CA 3KE6A 3FXMA 2IQ1A 3QN1B 3W43A 2ISNA 4RA2A 3KDJB 4JNDA 3FXLA 2IRMA 2JFRA 5D2UA 3F79A 3W44A 4LA7B 5F1MA 3PU9A 3D8KA 2JFTA 2Y09A 3UJLB 3ES2A 3W42A 2V06A 3W45A 3NMNB 4LG5B 4LGAB 3T91A 4DS8B 4RAFA 4RAGA 2I0OA 1A6QA 2CM1A 2PNQA 4N0GA 2JFSA 5ITIA 3FXJA 3KB3B 2POPA 2J82A 2P8EA 3ZVUB 4YZGA 2J86A 3ZT9A 3W40A 2PK0A 3JRQA 2I44A 3W41A 3RNRA 3RT0A 3FXOA 1TXOA
chains in the Genus database with same CATH superfamily
4WVOB 3T9QA 3MQ3A 2POMA 2XZVA 3EQ2A 3UJKA 4DA1A 4OICB 2J4OA 3NMVB 3NMTB 4YZHA 4LGBB 5JO2B 3FXKA 3UJGB 5JO1B 3N3CA 4IIKA 3KE6A 3FXMA 2IQ1A 3QN1B 3W43A 2ISNA 4RA2A 3KDJB 4JNDA 3FXLA 2IRMA 2JFRA 5D2UA 3F79A 3W44A 4LA7B 5F1MA 3PU9A 3D8KA 2JFTA 2Y09A 3UJLB 3ES2A 3W42A 2V06A 3W45A 3NMNB 4LG5B 4LGAB 3T91A 4DS8B 4RAFA 4RAGA 2I0OA 1A6QA 2CM1A 2PNQA 4N0GA 2JFSA 5ITIA 3FXJA 3KB3B 2POPA 2J82A 2P8EA 3ZVUB 4YZGA 2J86A 3ZT9A 3W40A 2PK0A 3JRQA 2I44A 4IIPA 3W41A 3RNRA 3RT0A 3FXOA 1TXOA
chains in the Genus database with same CATH topology
4WVOB 3T9QA 3MQ3A 2POMA 2XZVA 3EQ2A 3UJKA 4DA1A 4OICB 2J4OA 3NMVB 3NMTB 4YZHA 4LGBB 5JO2B 3FXKA 3UJGB 5JO1B 3N3CA 3KE6A 3FXMA 2IQ1A 3QN1B 3W43A 2ISNA 4RA2A 3KDJB 4JNDA 3FXLA 2IRMA 2JFRA 5D2UA 3F79A 3W44A 4LA7B 5F1MA 3PU9A 3D8KA 2JFTA 2Y09A 3UJLB 3ES2A 3W42A 2V06A 3W45A 3NMNB 4LG5B 4LGAB 3T91A 4DS8B 4RAFA 4RAGA 2I0OA 1A6QA 2CM1A 2PNQA 4N0GA 2JFSA 5ITIA 3FXJA 3KB3B 2POPA 2J82A 2P8EA 3ZVUB 4YZGA 2J86A 3ZT9A 3W40A 2PK0A 3JRQA 2I44A 3W41A 3RNRA 3RT0A 3FXOA 1TXOA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4WVO B;  3T9Q A;  3MQ3 A;  2POM A;  2XZV A;  3EQ2 A;  3UJK A;  4DA1 A;  4OIC B;  2J4O A;  3NMV B;  3NMT B;  4YZH A;  4LGB B;  5JO2 B;  3FXK A;  3UJG B;  5JO1 B;  3N3C A;  3KE6 A;  3FXM A;  2IQ1 A;  3QN1 B;  3W43 A;  2ISN A;  4RA2 A;  3KDJ B;  4JND A;  3FXL A;  2IRM A;  2JFR A;  5D2U A;  3F79 A;  3W44 A;  4LA7 B;  5F1M A;  3PU9 A;  3D8K A;  2JFT A;  2Y09 A;  3UJL B;  3ES2 A;  3W42 A;  2V06 A;  3W45 A;  3NMN B;  4LG5 B;  4LGA B;  3T91 A;  4DS8 B;  4RAF A;  4RAG A;  2I0O A;  1A6Q A;  2CM1 A;  2PNQ A;  4N0G A;  2JFS A;  5ITI A;  3FXJ A;  3KB3 B;  2POP A;  2J82 A;  2P8E A;  3ZVU B;  4YZG A;  2J86 A;  3ZT9 A;  3W40 A;  2PK0 A;  3JRQ A;  2I44 A;  3W41 A;  3RNR A;  3RT0 A;  3FXO A;  1TXO A; 
#chains in the Genus database with same CATH topology
 4WVO B;  3T9Q A;  3MQ3 A;  2POM A;  2XZV A;  3EQ2 A;  3UJK A;  4DA1 A;  4OIC B;  2J4O A;  3NMV B;  3NMT B;  4YZH A;  4LGB B;  5JO2 B;  3FXK A;  3UJG B;  5JO1 B;  3N3C A;  4IIK A;  3KE6 A;  3FXM A;  2IQ1 A;  3QN1 B;  3W43 A;  2ISN A;  4RA2 A;  3KDJ B;  4JND A;  3FXL A;  2IRM A;  2JFR A;  5D2U A;  3F79 A;  3W44 A;  4LA7 B;  5F1M A;  3PU9 A;  3D8K A;  2JFT A;  2Y09 A;  3UJL B;  3ES2 A;  3W42 A;  2V06 A;  3W45 A;  3NMN B;  4LG5 B;  4LGA B;  3T91 A;  4DS8 B;  4RAF A;  4RAG A;  2I0O A;  1A6Q A;  2CM1 A;  2PNQ A;  4N0G A;  2JFS A;  5ITI A;  3FXJ A;  3KB3 B;  2POP A;  2J82 A;  2P8E A;  3ZVU B;  4YZG A;  2J86 A;  3ZT9 A;  3W40 A;  2PK0 A;  3JRQ A;  2I44 A;  4IIP A;  3W41 A;  3RNR A;  3RT0 A;  3FXO A;  1TXO A; 
#chains in the Genus database with same CATH homology
 4WVO B;  3T9Q A;  3MQ3 A;  2POM A;  2XZV A;  3EQ2 A;  3UJK A;  4DA1 A;  4OIC B;  2J4O A;  3NMV B;  3NMT B;  4YZH A;  4LGB B;  5JO2 B;  3FXK A;  3UJG B;  5JO1 B;  3N3C A;  3KE6 A;  3FXM A;  2IQ1 A;  3QN1 B;  3W43 A;  2ISN A;  4RA2 A;  3KDJ B;  4JND A;  3FXL A;  2IRM A;  2JFR A;  5D2U A;  3F79 A;  3W44 A;  4LA7 B;  5F1M A;  3PU9 A;  3D8K A;  2JFT A;  2Y09 A;  3UJL B;  3ES2 A;  3W42 A;  2V06 A;  3W45 A;  3NMN B;  4LG5 B;  4LGA B;  3T91 A;  4DS8 B;  4RAF A;  4RAG A;  2I0O A;  1A6Q A;  2CM1 A;  2PNQ A;  4N0G A;  2JFS A;  5ITI A;  3FXJ A;  3KB3 B;  2POP A;  2J82 A;  2P8E A;  3ZVU B;  4YZG A;  2J86 A;  3ZT9 A;  3W40 A;  2PK0 A;  3JRQ A;  2I44 A;  3W41 A;  3RNR A;  3RT0 A;  3FXO A;  1TXO A; 
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