3NMTB

Crystal structure of pyrabactin bound abscisic acid receptor pyl2 mutant a93f in complex with type 2c protein phosphatase hab1
Total Genus 85
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
85
sequence length
321
structure length
296
Chain Sequence
CIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKRQVQWDKVFTSCFLTVDGEIEGKIGRAVVSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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connected with : NaN
molecule tags Protein binding
source organism Arabidopsis thaliana
publication title Identification and mechanism of ABA receptor antagonism.
pubmed doi rcsb
molecule keywords Abscisic acid receptor PYL2
total genus 85
structure length 296
sequence length 321
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2010-06-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
B PF00481 PP2C Protein phosphatase 2C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 3nmtB00
2Y09A 4RAGA 2PK0A 3NMTB 2POMA 3UJGB 5JO1B 2J82A 4RAFA 4OICB 4LG5B 3JRQA 3W44A 5D2UA 3RNRA 4WVOB 3FXOA 5JO2B 3FXMA 4LA7B 3UJLB 3N3CA 2XZVA 3D8KA 2ISNA 3MQ3A 3W42A 3W43A 1A6QA 3W40A 3T91A 2JFSA 4LGBB 3ES2A 2P8EA 4YZHA 3W41A 3T9QA 3UJKA 3FXLA 2J4OA 2IRMA 3RT0A 2IQ1A 3W45A 3FXJA 2I44A 5ITIA 5F1MA 3ZT9A 4N0GA 2PNQA 2POPA 4JNDA 4DS8B 2JFTA 3KE6A 2V06A 3EQ2A 3KDJB 3PU9A 4DA1A 3ZVUB 2I0OA 4LGAB 3F79A 3FXKA 2JFRA 2CM1A 1TXOA 4RA2A 2J86A 3NMVB 4YZGA 3NMNB 3KB3B 3QN1B
chains in the Genus database with same CATH superfamily
2Y09A 4RAGA 2PK0A 3NMTB 2POMA 3UJGB 5JO1B 2J82A 4RAFA 4OICB 4LG5B 3JRQA 3W44A 5D2UA 4IIKA 3RNRA 4WVOB 3FXOA 5JO2B 3FXMA 4LA7B 3UJLB 3N3CA 2XZVA 3D8KA 2ISNA 3MQ3A 3W42A 3W43A 1A6QA 3W40A 3T91A 2JFSA 4LGBB 3ES2A 2P8EA 4YZHA 3W41A 3T9QA 3UJKA 3FXLA 2J4OA 2IRMA 3RT0A 2IQ1A 3W45A 3FXJA 2I44A 5ITIA 5F1MA 3ZT9A 4N0GA 2PNQA 2POPA 4JNDA 4DS8B 2JFTA 3KE6A 2V06A 3EQ2A 3KDJB 3PU9A 4DA1A 3ZVUB 2I0OA 4LGAB 3F79A 3FXKA 2JFRA 2CM1A 1TXOA 4RA2A 4IIPA 2J86A 3NMVB 4YZGA 3NMNB 3KB3B 3QN1B
chains in the Genus database with same CATH topology
2Y09A 4RAGA 2PK0A 3NMTB 2POMA 3UJGB 5JO1B 2J82A 4RAFA 4OICB 4LG5B 3JRQA 3W44A 5D2UA 3RNRA 4WVOB 3FXOA 5JO2B 3FXMA 4LA7B 3UJLB 3N3CA 2XZVA 3D8KA 2ISNA 3MQ3A 3W42A 3W43A 1A6QA 3W40A 3T91A 2JFSA 4LGBB 3ES2A 2P8EA 4YZHA 3W41A 3T9QA 3UJKA 3FXLA 2J4OA 2IRMA 3RT0A 2IQ1A 3W45A 3FXJA 2I44A 5ITIA 5F1MA 3ZT9A 4N0GA 2PNQA 2POPA 4JNDA 4DS8B 2JFTA 3KE6A 2V06A 3EQ2A 3KDJB 3PU9A 4DA1A 3ZVUB 2I0OA 4LGAB 3F79A 3FXKA 2JFRA 2CM1A 1TXOA 4RA2A 2J86A 3NMVB 4YZGA 3NMNB 3KB3B 3QN1B
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2Y09 A;  4RAG A;  2PK0 A;  3NMT B;  2POM A;  3UJG B;  5JO1 B;  2J82 A;  4RAF A;  4OIC B;  4LG5 B;  3JRQ A;  3W44 A;  5D2U A;  3RNR A;  4WVO B;  3FXO A;  5JO2 B;  3FXM A;  4LA7 B;  3UJL B;  3N3C A;  2XZV A;  3D8K A;  2ISN A;  3MQ3 A;  3W42 A;  3W43 A;  1A6Q A;  3W40 A;  3T91 A;  2JFS A;  4LGB B;  3ES2 A;  2P8E A;  4YZH A;  3W41 A;  3T9Q A;  3UJK A;  3FXL A;  2J4O A;  2IRM A;  3RT0 A;  2IQ1 A;  3W45 A;  3FXJ A;  2I44 A;  5ITI A;  5F1M A;  3ZT9 A;  4N0G A;  2PNQ A;  2POP A;  4JND A;  4DS8 B;  2JFT A;  3KE6 A;  2V06 A;  3EQ2 A;  3KDJ B;  3PU9 A;  4DA1 A;  3ZVU B;  2I0O A;  4LGA B;  3F79 A;  3FXK A;  2JFR A;  2CM1 A;  1TXO A;  4RA2 A;  2J86 A;  3NMV B;  4YZG A;  3NMN B;  3KB3 B;  3QN1 B; 
#chains in the Genus database with same CATH topology
 2Y09 A;  4RAG A;  2PK0 A;  3NMT B;  2POM A;  3UJG B;  5JO1 B;  2J82 A;  4RAF A;  4OIC B;  4LG5 B;  3JRQ A;  3W44 A;  5D2U A;  4IIK A;  3RNR A;  4WVO B;  3FXO A;  5JO2 B;  3FXM A;  4LA7 B;  3UJL B;  3N3C A;  2XZV A;  3D8K A;  2ISN A;  3MQ3 A;  3W42 A;  3W43 A;  1A6Q A;  3W40 A;  3T91 A;  2JFS A;  4LGB B;  3ES2 A;  2P8E A;  4YZH A;  3W41 A;  3T9Q A;  3UJK A;  3FXL A;  2J4O A;  2IRM A;  3RT0 A;  2IQ1 A;  3W45 A;  3FXJ A;  2I44 A;  5ITI A;  5F1M A;  3ZT9 A;  4N0G A;  2PNQ A;  2POP A;  4JND A;  4DS8 B;  2JFT A;  3KE6 A;  2V06 A;  3EQ2 A;  3KDJ B;  3PU9 A;  4DA1 A;  3ZVU B;  2I0O A;  4LGA B;  3F79 A;  3FXK A;  2JFR A;  2CM1 A;  1TXO A;  4RA2 A;  4IIP A;  2J86 A;  3NMV B;  4YZG A;  3NMN B;  3KB3 B;  3QN1 B; 
#chains in the Genus database with same CATH homology
 2Y09 A;  4RAG A;  2PK0 A;  3NMT B;  2POM A;  3UJG B;  5JO1 B;  2J82 A;  4RAF A;  4OIC B;  4LG5 B;  3JRQ A;  3W44 A;  5D2U A;  3RNR A;  4WVO B;  3FXO A;  5JO2 B;  3FXM A;  4LA7 B;  3UJL B;  3N3C A;  2XZV A;  3D8K A;  2ISN A;  3MQ3 A;  3W42 A;  3W43 A;  1A6Q A;  3W40 A;  3T91 A;  2JFS A;  4LGB B;  3ES2 A;  2P8E A;  4YZH A;  3W41 A;  3T9Q A;  3UJK A;  3FXL A;  2J4O A;  2IRM A;  3RT0 A;  2IQ1 A;  3W45 A;  3FXJ A;  2I44 A;  5ITI A;  5F1M A;  3ZT9 A;  4N0G A;  2PNQ A;  2POP A;  4JND A;  4DS8 B;  2JFT A;  3KE6 A;  2V06 A;  3EQ2 A;  3KDJ B;  3PU9 A;  4DA1 A;  3ZVU B;  2I0O A;  4LGA B;  3F79 A;  3FXK A;  2JFR A;  2CM1 A;  1TXO A;  4RA2 A;  2J86 A;  3NMV B;  4YZG A;  3NMN B;  3KB3 B;  3QN1 B;
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similar chains in the pdb database (?% sequence similarity)

  
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