3T9QA

Structure of the phosphatase domain of the cell fate determinant spoiie from bacillus subtilis (mn presoaked)
Total Genus 42

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
224
structure length
216
Chain Sequence
AMSYRVSTGAAHAAKGGGLVSGDSYSMMELGARKYAAAISDGGARAHFESNETIKLLEKILESGIDEKIAIKTINSILSLRTTDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASIINEFDVEVVSEQLKAGDLLIMMSDGIFEGPKHVENHDLWMKRKMKGLKTNDPQEIADLLMEEVIRTRSGQIEDDMTVVVVRIDHNTPKW

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Bacillus subtilis
publication title Structure of the phosphatase domain of the cell fate determinant SpoIIE from Bacillus subtilis.
pubmed doi rcsb
molecule keywords Stage II sporulation protein E
total genus 42
structure length 216
sequence length 224
chains with identical sequence B
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2011-08-03

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07228 SpoIIE Stage II sporulation protein E (SpoIIE)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 3t9qA00
2IRMA 3PU9A 5D2UA 4DA1A 3ES2A 3W43A 3UJLB 2I0OA 2I44A 2CM1A 3N3CA 2POMA 3UJKA 2J86A 3FXJA 3KE6A 1TXOA 3W40A 3FXKA 4YZHA 3W41A 3T9QA 3W44A 4JNDA 2PNQA 2J82A 2PK0A 4YZGA 2JFTA 3ZVUB 5JO1B 3UJGB 3KDJB 2J4OA 5F1MA 2Y09A 3F79A 3KB3B 2POPA 4LGBB 3FXOA 2JFSA 5JO2B 2V06A 4RAFA 3W45A 5ITIA 3FXLA 2P8EA 4LA7B 2ISNA 3NMTB 3NMVB 2XZVA 3RT0A 3NMNB 4N0GA 4LGAB 4OICB 4LG5B 4DS8B 3T91A 3RNRA 2IQ1A 3EQ2A 3JRQA 3QN1B 3ZT9A 3MQ3A 3D8KA 4RAGA 4RA2A 3W42A 4WVOB 1A6QA 3FXMA 2JFRA
chains in the Genus database with same CATH superfamily
4IIKA 2IRMA 3PU9A 5D2UA 4DA1A 3ES2A 3W43A 3UJLB 2I0OA 2I44A 2CM1A 4IIPA 3N3CA 2POMA 3UJKA 2J86A 3FXJA 3KE6A 1TXOA 3W40A 3FXKA 4YZHA 3W41A 3T9QA 3W44A 4JNDA 2PNQA 2J82A 2PK0A 4YZGA 2JFTA 3ZVUB 5JO1B 3UJGB 3KDJB 2J4OA 5F1MA 2Y09A 3F79A 3KB3B 2POPA 4LGBB 3FXOA 2JFSA 5JO2B 2V06A 4RAFA 3W45A 5ITIA 3FXLA 2P8EA 4LA7B 2ISNA 3NMTB 3NMVB 2XZVA 3RT0A 3NMNB 4N0GA 4LGAB 4OICB 4LG5B 4DS8B 3T91A 3RNRA 2IQ1A 3EQ2A 3JRQA 3QN1B 3ZT9A 3MQ3A 3D8KA 4RAGA 4RA2A 3W42A 4WVOB 1A6QA 3FXMA 2JFRA
chains in the Genus database with same CATH topology
2IRMA 3PU9A 5D2UA 4DA1A 3ES2A 3W43A 3UJLB 2I0OA 2I44A 2CM1A 3N3CA 2POMA 3UJKA 2J86A 3FXJA 3KE6A 1TXOA 3W40A 3FXKA 4YZHA 3W41A 3T9QA 3W44A 4JNDA 2PNQA 2J82A 2PK0A 4YZGA 2JFTA 3ZVUB 5JO1B 3UJGB 3KDJB 2J4OA 5F1MA 2Y09A 3F79A 3KB3B 2POPA 4LGBB 3FXOA 2JFSA 5JO2B 2V06A 4RAFA 3W45A 5ITIA 3FXLA 2P8EA 4LA7B 2ISNA 3NMTB 3NMVB 2XZVA 3RT0A 3NMNB 4N0GA 4LGAB 4OICB 4LG5B 4DS8B 3T91A 3RNRA 2IQ1A 3EQ2A 3JRQA 3QN1B 3ZT9A 3MQ3A 3D8KA 4RAGA 4RA2A 3W42A 4WVOB 1A6QA 3FXMA 2JFRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2IRM A;  3PU9 A;  5D2U A;  4DA1 A;  3ES2 A;  3W43 A;  3UJL B;  2I0O A;  2I44 A;  2CM1 A;  3N3C A;  2POM A;  3UJK A;  2J86 A;  3FXJ A;  3KE6 A;  1TXO A;  3W40 A;  3FXK A;  4YZH A;  3W41 A;  3T9Q A;  3W44 A;  4JND A;  2PNQ A;  2J82 A;  2PK0 A;  4YZG A;  2JFT A;  3ZVU B;  5JO1 B;  3UJG B;  3KDJ B;  2J4O A;  5F1M A;  2Y09 A;  3F79 A;  3KB3 B;  2POP A;  4LGB B;  3FXO A;  2JFS A;  5JO2 B;  2V06 A;  4RAF A;  3W45 A;  5ITI A;  3FXL A;  2P8E A;  4LA7 B;  2ISN A;  3NMT B;  3NMV B;  2XZV A;  3RT0 A;  3NMN B;  4N0G A;  4LGA B;  4OIC B;  4LG5 B;  4DS8 B;  3T91 A;  3RNR A;  2IQ1 A;  3EQ2 A;  3JRQ A;  3QN1 B;  3ZT9 A;  3MQ3 A;  3D8K A;  4RAG A;  4RA2 A;  3W42 A;  4WVO B;  1A6Q A;  3FXM A;  2JFR A; 
#chains in the Genus database with same CATH topology
 4IIK A;  2IRM A;  3PU9 A;  5D2U A;  4DA1 A;  3ES2 A;  3W43 A;  3UJL B;  2I0O A;  2I44 A;  2CM1 A;  4IIP A;  3N3C A;  2POM A;  3UJK A;  2J86 A;  3FXJ A;  3KE6 A;  1TXO A;  3W40 A;  3FXK A;  4YZH A;  3W41 A;  3T9Q A;  3W44 A;  4JND A;  2PNQ A;  2J82 A;  2PK0 A;  4YZG A;  2JFT A;  3ZVU B;  5JO1 B;  3UJG B;  3KDJ B;  2J4O A;  5F1M A;  2Y09 A;  3F79 A;  3KB3 B;  2POP A;  4LGB B;  3FXO A;  2JFS A;  5JO2 B;  2V06 A;  4RAF A;  3W45 A;  5ITI A;  3FXL A;  2P8E A;  4LA7 B;  2ISN A;  3NMT B;  3NMV B;  2XZV A;  3RT0 A;  3NMN B;  4N0G A;  4LGA B;  4OIC B;  4LG5 B;  4DS8 B;  3T91 A;  3RNR A;  2IQ1 A;  3EQ2 A;  3JRQ A;  3QN1 B;  3ZT9 A;  3MQ3 A;  3D8K A;  4RAG A;  4RA2 A;  3W42 A;  4WVO B;  1A6Q A;  3FXM A;  2JFR A; 
#chains in the Genus database with same CATH homology
 2IRM A;  3PU9 A;  5D2U A;  4DA1 A;  3ES2 A;  3W43 A;  3UJL B;  2I0O A;  2I44 A;  2CM1 A;  3N3C A;  2POM A;  3UJK A;  2J86 A;  3FXJ A;  3KE6 A;  1TXO A;  3W40 A;  3FXK A;  4YZH A;  3W41 A;  3T9Q A;  3W44 A;  4JND A;  2PNQ A;  2J82 A;  2PK0 A;  4YZG A;  2JFT A;  3ZVU B;  5JO1 B;  3UJG B;  3KDJ B;  2J4O A;  5F1M A;  2Y09 A;  3F79 A;  3KB3 B;  2POP A;  4LGB B;  3FXO A;  2JFS A;  5JO2 B;  2V06 A;  4RAF A;  3W45 A;  5ITI A;  3FXL A;  2P8E A;  4LA7 B;  2ISN A;  3NMT B;  3NMV B;  2XZV A;  3RT0 A;  3NMN B;  4N0G A;  4LGA B;  4OIC B;  4LG5 B;  4DS8 B;  3T91 A;  3RNR A;  2IQ1 A;  3EQ2 A;  3JRQ A;  3QN1 B;  3ZT9 A;  3MQ3 A;  3D8K A;  4RAG A;  4RA2 A;  3W42 A;  4WVO B;  1A6Q A;  3FXM A;  2JFR A; 
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