3W42A

Crystal structure of rsbx in complex with manganese in space group p1
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
199
structure length
199
Chain Sequence
MIQVEENEHIQTLVYQLNKEGKSICGDSFFMKADDKELICAVADGLGSGSLANESSAAIKDLVENYASEDVESIIERCNQAMKNKRGATASILKINFEQRQFTYCSVGNVRFILHSPSGESFYPLPISGYLSGKPQKYKTHTATYEKGSKFIIHTDGLNVPDIRSHLKKGQSVEEISNSLKMYTTSRKDDLTYILGQLS
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Bacillus subtilis
publication title Structure of the RsbX phosphatase involved in the general stress response of Bacillus subtilis
pubmed doi rcsb
molecule keywords Phosphoserine phosphatase RsbX
total genus 64
structure length 199
sequence length 199
chains with identical sequence B
ec nomenclature ec 3.1.3.3: Phosphoserine phosphatase.
pdb deposition date 2013-01-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF07228 SpoIIE Stage II sporulation protein E (SpoIIE)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 3w42A00
5D2UA 2XZVA 3FXJA 3FXLA 3KB3B 2JFSA 2P8EA 4LG5B 4OICB 3W42A 3QN1B 2PK0A 2I0OA 2I44A 2J4OA 2PNQA 3T9QA 2CM1A 3FXKA 3JRQA 2V06A 2IQ1A 3MQ3A 2J82A 2Y09A 3T91A 3W44A 4YZGA 3RT0A 3F79A 4LGBB 3UJLB 2POMA 4YZHA 3N3CA 3W40A 3ZT9A 3W43A 1A6QA 4DS8B 3ZVUB 3NMNB 2POPA 2JFTA 3ES2A 4WVOB 4RAGA 2ISNA 5F1MA 3KE6A 3W45A 5JO2B 3FXOA 4N0GA 3EQ2A 5JO1B 3UJKA 3NMVB 3RNRA 3UJGB 4DA1A 3W41A 1TXOA 3PU9A 5ITIA 2IRMA 3KDJB 4JNDA 4RAFA 3D8KA 2JFRA 2J86A 4RA2A 3NMTB 4LGAB 4LA7B 3FXMA
chains in the Genus database with same CATH superfamily
5D2UA 2XZVA 3FXJA 3FXLA 3KB3B 2JFSA 2P8EA 4LG5B 4OICB 3W42A 3QN1B 4IIKA 2PK0A 2I0OA 2I44A 2J4OA 2PNQA 3T9QA 2CM1A 3FXKA 3JRQA 2V06A 2IQ1A 3MQ3A 2J82A 2Y09A 3T91A 3W44A 4YZGA 3RT0A 3F79A 4LGBB 3UJLB 2POMA 4YZHA 3N3CA 3W40A 3ZT9A 3W43A 1A6QA 4DS8B 3ZVUB 3NMNB 4IIPA 2POPA 2JFTA 3ES2A 4WVOB 4RAGA 2ISNA 5F1MA 3KE6A 3W45A 5JO2B 3FXOA 4N0GA 3EQ2A 5JO1B 3UJKA 3NMVB 3RNRA 3UJGB 4DA1A 3W41A 1TXOA 3PU9A 5ITIA 2IRMA 3KDJB 4JNDA 4RAFA 3D8KA 2JFRA 2J86A 4RA2A 3NMTB 4LGAB 4LA7B 3FXMA
chains in the Genus database with same CATH topology
5D2UA 2XZVA 3FXJA 3FXLA 3KB3B 2JFSA 2P8EA 4LG5B 4OICB 3W42A 3QN1B 2PK0A 2I0OA 2I44A 2J4OA 2PNQA 3T9QA 2CM1A 3FXKA 3JRQA 2V06A 2IQ1A 3MQ3A 2J82A 2Y09A 3T91A 3W44A 4YZGA 3RT0A 3F79A 4LGBB 3UJLB 2POMA 4YZHA 3N3CA 3W40A 3ZT9A 3W43A 1A6QA 4DS8B 3ZVUB 3NMNB 2POPA 2JFTA 3ES2A 4WVOB 4RAGA 2ISNA 5F1MA 3KE6A 3W45A 5JO2B 3FXOA 4N0GA 3EQ2A 5JO1B 3UJKA 3NMVB 3RNRA 3UJGB 4DA1A 3W41A 1TXOA 3PU9A 5ITIA 2IRMA 3KDJB 4JNDA 4RAFA 3D8KA 2JFRA 2J86A 4RA2A 3NMTB 4LGAB 4LA7B 3FXMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5D2U A;  2XZV A;  3FXJ A;  3FXL A;  3KB3 B;  2JFS A;  2P8E A;  4LG5 B;  4OIC B;  3W42 A;  3QN1 B;  2PK0 A;  2I0O A;  2I44 A;  2J4O A;  2PNQ A;  3T9Q A;  2CM1 A;  3FXK A;  3JRQ A;  2V06 A;  2IQ1 A;  3MQ3 A;  2J82 A;  2Y09 A;  3T91 A;  3W44 A;  4YZG A;  3RT0 A;  3F79 A;  4LGB B;  3UJL B;  2POM A;  4YZH A;  3N3C A;  3W40 A;  3ZT9 A;  3W43 A;  1A6Q A;  4DS8 B;  3ZVU B;  3NMN B;  2POP A;  2JFT A;  3ES2 A;  4WVO B;  4RAG A;  2ISN A;  5F1M A;  3KE6 A;  3W45 A;  5JO2 B;  3FXO A;  4N0G A;  3EQ2 A;  5JO1 B;  3UJK A;  3NMV B;  3RNR A;  3UJG B;  4DA1 A;  3W41 A;  1TXO A;  3PU9 A;  5ITI A;  2IRM A;  3KDJ B;  4JND A;  4RAF A;  3D8K A;  2JFR A;  2J86 A;  4RA2 A;  3NMT B;  4LGA B;  4LA7 B;  3FXM A; 
#chains in the Genus database with same CATH topology
 5D2U A;  2XZV A;  3FXJ A;  3FXL A;  3KB3 B;  2JFS A;  2P8E A;  4LG5 B;  4OIC B;  3W42 A;  3QN1 B;  4IIK A;  2PK0 A;  2I0O A;  2I44 A;  2J4O A;  2PNQ A;  3T9Q A;  2CM1 A;  3FXK A;  3JRQ A;  2V06 A;  2IQ1 A;  3MQ3 A;  2J82 A;  2Y09 A;  3T91 A;  3W44 A;  4YZG A;  3RT0 A;  3F79 A;  4LGB B;  3UJL B;  2POM A;  4YZH A;  3N3C A;  3W40 A;  3ZT9 A;  3W43 A;  1A6Q A;  4DS8 B;  3ZVU B;  3NMN B;  4IIP A;  2POP A;  2JFT A;  3ES2 A;  4WVO B;  4RAG A;  2ISN A;  5F1M A;  3KE6 A;  3W45 A;  5JO2 B;  3FXO A;  4N0G A;  3EQ2 A;  5JO1 B;  3UJK A;  3NMV B;  3RNR A;  3UJG B;  4DA1 A;  3W41 A;  1TXO A;  3PU9 A;  5ITI A;  2IRM A;  3KDJ B;  4JND A;  4RAF A;  3D8K A;  2JFR A;  2J86 A;  4RA2 A;  3NMT B;  4LGA B;  4LA7 B;  3FXM A; 
#chains in the Genus database with same CATH homology
 5D2U A;  2XZV A;  3FXJ A;  3FXL A;  3KB3 B;  2JFS A;  2P8E A;  4LG5 B;  4OIC B;  3W42 A;  3QN1 B;  2PK0 A;  2I0O A;  2I44 A;  2J4O A;  2PNQ A;  3T9Q A;  2CM1 A;  3FXK A;  3JRQ A;  2V06 A;  2IQ1 A;  3MQ3 A;  2J82 A;  2Y09 A;  3T91 A;  3W44 A;  4YZG A;  3RT0 A;  3F79 A;  4LGB B;  3UJL B;  2POM A;  4YZH A;  3N3C A;  3W40 A;  3ZT9 A;  3W43 A;  1A6Q A;  4DS8 B;  3ZVU B;  3NMN B;  2POP A;  2JFT A;  3ES2 A;  4WVO B;  4RAG A;  2ISN A;  5F1M A;  3KE6 A;  3W45 A;  5JO2 B;  3FXO A;  4N0G A;  3EQ2 A;  5JO1 B;  3UJK A;  3NMV B;  3RNR A;  3UJG B;  4DA1 A;  3W41 A;  1TXO A;  3PU9 A;  5ITI A;  2IRM A;  3KDJ B;  4JND A;  4RAF A;  3D8K A;  2JFR A;  2J86 A;  4RA2 A;  3NMT B;  4LGA B;  4LA7 B;  3FXM A; 
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