3JRQA

Crystal structure of (+)-aba-bound pyl1 in complex with abi1
Total Genus 91
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
91
sequence length
299
structure length
271
Chain Sequence
SVPLYGFTSICGRRPEMEDAVSTIPRFLQSRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural basis of abscisic acid signalling
pubmed doi rcsb
molecule tags Hydrolase/hormone receptor
source organism Arabidopsis thaliana
molecule keywords Protein phosphatase 2C 56
total genus 91
structure length 271
sequence length 299
ec nomenclature ec 3.1.3.16: Protein-serine/threonine phosphatase.
pdb deposition date 2009-09-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00481 PP2C Protein phosphatase 2C
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.60.40.10 Alpha Beta 4-Layer Sandwich Phosphatase 2c; domain 1 PPM-type phosphatase domain 3jrqA00
5F1MA 3W43A 3UJKA 4LGAB 3ZT9A 3D8KA 3FXOA 1A6QA 3FXMA 3EQ2A 3ES2A 3PU9A 1TXOA 2J86A 3ZVUB 2JFRA 3JRQA 2J4OA 2CM1A 3T91A 3NMNB 4WVOB 2POPA 3W42A 3W44A 2I0OA 4DA1A 3RT0A 3UJLB 2IRMA 5JO2B 3W41A 4RAGA 4DS8B 3QN1B 3KE6A 2PK0A 3T9QA 3N3CA 4YZGA 4LG5B 5ITIA 4LGBB 3FXLA 3NMVB 2IQ1A 3FXJA 3MQ3A 2POMA 2XZVA 3FXKA 4OICB 4N0GA 2J82A 4RAFA 5D2UA 3RNRA 4RA2A 3W45A 2Y09A 5JO1B 4LA7B 3KDJB 3UJGB 2I44A 2ISNA 2JFTA 4YZHA 3W40A 3F79A 2PNQA 3KB3B 4JNDA 2JFSA 3NMTB 2V06A 2P8EA
chains in the Genus database with same CATH superfamily
5F1MA 3W43A 3UJKA 4LGAB 3ZT9A 3D8KA 3FXOA 1A6QA 3FXMA 3EQ2A 3ES2A 3PU9A 1TXOA 2J86A 3ZVUB 2JFRA 4IIPA 3JRQA 2J4OA 2CM1A 3T91A 3NMNB 4WVOB 2POPA 3W42A 3W44A 2I0OA 4DA1A 3RT0A 3UJLB 2IRMA 5JO2B 3W41A 4RAGA 4DS8B 3QN1B 3KE6A 2PK0A 3T9QA 3N3CA 4YZGA 4LG5B 5ITIA 4IIKA 4LGBB 3FXLA 3NMVB 2IQ1A 3FXJA 3MQ3A 2POMA 2XZVA 3FXKA 4OICB 4N0GA 2J82A 4RAFA 5D2UA 3RNRA 4RA2A 3W45A 2Y09A 5JO1B 4LA7B 3KDJB 3UJGB 2I44A 2ISNA 2JFTA 4YZHA 3W40A 3F79A 2PNQA 3KB3B 4JNDA 2JFSA 3NMTB 2V06A 2P8EA
chains in the Genus database with same CATH topology
5F1MA 3W43A 3UJKA 4LGAB 3ZT9A 3D8KA 3FXOA 1A6QA 3FXMA 3EQ2A 3ES2A 3PU9A 1TXOA 2J86A 3ZVUB 2JFRA 3JRQA 2J4OA 2CM1A 3T91A 3NMNB 4WVOB 2POPA 3W42A 3W44A 2I0OA 4DA1A 3RT0A 3UJLB 2IRMA 5JO2B 3W41A 4RAGA 4DS8B 3QN1B 3KE6A 2PK0A 3T9QA 3N3CA 4YZGA 4LG5B 5ITIA 4LGBB 3FXLA 3NMVB 2IQ1A 3FXJA 3MQ3A 2POMA 2XZVA 3FXKA 4OICB 4N0GA 2J82A 4RAFA 5D2UA 3RNRA 4RA2A 3W45A 2Y09A 5JO1B 4LA7B 3KDJB 3UJGB 2I44A 2ISNA 2JFTA 4YZHA 3W40A 3F79A 2PNQA 3KB3B 4JNDA 2JFSA 3NMTB 2V06A 2P8EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5F1M A;  3W43 A;  3UJK A;  4LGA B;  3ZT9 A;  3D8K A;  3FXO A;  1A6Q A;  3FXM A;  3EQ2 A;  3ES2 A;  3PU9 A;  1TXO A;  2J86 A;  3ZVU B;  2JFR A;  3JRQ A;  2J4O A;  2CM1 A;  3T91 A;  3NMN B;  4WVO B;  2POP A;  3W42 A;  3W44 A;  2I0O A;  4DA1 A;  3RT0 A;  3UJL B;  2IRM A;  5JO2 B;  3W41 A;  4RAG A;  4DS8 B;  3QN1 B;  3KE6 A;  2PK0 A;  3T9Q A;  3N3C A;  4YZG A;  4LG5 B;  5ITI A;  4LGB B;  3FXL A;  3NMV B;  2IQ1 A;  3FXJ A;  3MQ3 A;  2POM A;  2XZV A;  3FXK A;  4OIC B;  4N0G A;  2J82 A;  4RAF A;  5D2U A;  3RNR A;  4RA2 A;  3W45 A;  2Y09 A;  5JO1 B;  4LA7 B;  3KDJ B;  3UJG B;  2I44 A;  2ISN A;  2JFT A;  4YZH A;  3W40 A;  3F79 A;  2PNQ A;  3KB3 B;  4JND A;  2JFS A;  3NMT B;  2V06 A;  2P8E A; 
#chains in the Genus database with same CATH topology
 5F1M A;  3W43 A;  3UJK A;  4LGA B;  3ZT9 A;  3D8K A;  3FXO A;  1A6Q A;  3FXM A;  3EQ2 A;  3ES2 A;  3PU9 A;  1TXO A;  2J86 A;  3ZVU B;  2JFR A;  4IIP A;  3JRQ A;  2J4O A;  2CM1 A;  3T91 A;  3NMN B;  4WVO B;  2POP A;  3W42 A;  3W44 A;  2I0O A;  4DA1 A;  3RT0 A;  3UJL B;  2IRM A;  5JO2 B;  3W41 A;  4RAG A;  4DS8 B;  3QN1 B;  3KE6 A;  2PK0 A;  3T9Q A;  3N3C A;  4YZG A;  4LG5 B;  5ITI A;  4IIK A;  4LGB B;  3FXL A;  3NMV B;  2IQ1 A;  3FXJ A;  3MQ3 A;  2POM A;  2XZV A;  3FXK A;  4OIC B;  4N0G A;  2J82 A;  4RAF A;  5D2U A;  3RNR A;  4RA2 A;  3W45 A;  2Y09 A;  5JO1 B;  4LA7 B;  3KDJ B;  3UJG B;  2I44 A;  2ISN A;  2JFT A;  4YZH A;  3W40 A;  3F79 A;  2PNQ A;  3KB3 B;  4JND A;  2JFS A;  3NMT B;  2V06 A;  2P8E A; 
#chains in the Genus database with same CATH homology
 5F1M A;  3W43 A;  3UJK A;  4LGA B;  3ZT9 A;  3D8K A;  3FXO A;  1A6Q A;  3FXM A;  3EQ2 A;  3ES2 A;  3PU9 A;  1TXO A;  2J86 A;  3ZVU B;  2JFR A;  3JRQ A;  2J4O A;  2CM1 A;  3T91 A;  3NMN B;  4WVO B;  2POP A;  3W42 A;  3W44 A;  2I0O A;  4DA1 A;  3RT0 A;  3UJL B;  2IRM A;  5JO2 B;  3W41 A;  4RAG A;  4DS8 B;  3QN1 B;  3KE6 A;  2PK0 A;  3T9Q A;  3N3C A;  4YZG A;  4LG5 B;  5ITI A;  4LGB B;  3FXL A;  3NMV B;  2IQ1 A;  3FXJ A;  3MQ3 A;  2POM A;  2XZV A;  3FXK A;  4OIC B;  4N0G A;  2J82 A;  4RAF A;  5D2U A;  3RNR A;  4RA2 A;  3W45 A;  2Y09 A;  5JO1 B;  4LA7 B;  3KDJ B;  3UJG B;  2I44 A;  2ISN A;  2JFT A;  4YZH A;  3W40 A;  3F79 A;  2PNQ A;  3KB3 B;  4JND A;  2JFS A;  3NMT B;  2V06 A;  2P8E A; 
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