4OOCA

Dehydratase domain of the polyketide ppsc from mycobacterium tuberculosis
Total Genus 65

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
294
structure length
268
Chain Sequence
DTHPLLGVGVTDPTNGTRVWESELDPDLLWLADHVIDDLVVLPGAAYAEIALAAATDTFAVEQDQPWMISELDLRQMLHVTPGTVLVTTLTGDEQRCQVEIRTRSGSSGWTTHATATVARAEPLTADLEDQLDPDDLYQRLRGAGQQHGPAFQGIVGLAVTQAGVARAQVRLPASARTGSREFMLHPVMMDIALQTLGATRTATDLSALVVPVRFAGVHVYGDITRGVRAVGSLAAAGDRLVGEVVLTDANGQPLLVVDEVEMAVLGS

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Mycobacterium tuberculosis
publication title Insights into the catalytic mechanism of the DH domain of the Mycobacterium tuberculosis polyketide synthase PpsC and architecture of the beta-carbon processing domains
rcsb
molecule keywords Phthiocerol synthesis polyketide synthase type I PpsC
total genus 65
structure length 268
sequence length 294
ec nomenclature ec 2.3.1.41: Beta-ketoacyl-[acyl-carrier-protein] synthase I.
pdb deposition date 2014-01-31
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.129.110 Alpha Beta Roll Thiol Ester Dehydrase; Chain A Thiol Ester Dehydrase; Chain A 4oocA00
2VZ9A 5E1VA 2VZ8A 3EL6A 3HRRA 4LN9A 4KC5A 5BP2A 5BP3A 4OOCA 4U3VA 3KG6A 3HRQA 5KKUA 3KG7A 3KG9A
chains in the Genus database with same CATH superfamily
3ESIA 3CF9A 5HWFA 4MZQA 3ZH5A 3HDUA 3KUWA 1WM6A 3CF8A 4RLUA 4IENA 1Z54A 5EO2A 2XEMA 5EP5A 5BUWA 4OOBA 4B0BA 2QQPA 5EGKA 4AE7A 3B18A 2GLMA 2F3XA 1PSUA 1VH5A 3AZBA 3B7JA 3DOZA 3KX8A 3DKZA 4LN9A 4B0IA 5BP2A 1Y7UA 2F41A 2GLLA 1VH9A 2ESSA 1S5UA 1LO8A 2PFCA 3KG6A 2VKZG 3D6XA 3E1EA 1WN3A 2CY9A 2HBOA 2VZ9A 3R35A 4RLTB 1WLVA 2FUJA 2GLVA 5EGJA 5BUXA 2NUJA 3LMBA 4ZV3A 1YLIA 4ORDA 2H4UA 4WNBB 2HX5A 4ZW0A 4ZRFA 3KG9A 4K4CA 4RLTA 4HZNA 2Q78A 1LO7A 3LWGA 5BYUA 1SC0A 3K67A 5HZ4A 4K4DA 4W78B 4R9ZA 4ZJBA 1MKBA 4WNBA 1T82A 4RLWB 4K4BA 4XY6A 3RQBA 4MOCA 3TEAA 3KUVA 4FFUA 3RD7A 2UV8G 4HZPA 1MKAA 2EGJA 4B0CA 2OKIA 4OOCA 3CJYA 2PRXA 4W78A 4XY5A 3KG7A 3HMJG 2VZ8A 1S9CA 1IXLA 2XFLA 4KC5A 3S4KA 4RLJB 2HLJA 1PN4A 3FRNA 3R37A 1Q6WA 3LBBA 5SZVA 2B3MA 5DIOA 3ZH6A 3U0AA 3SPSA 3KVIA 3ZH7B 1VPMA 4MTUA 2GVHA 2GLPA 3P3IA 2QQ2A 4I4JA 3AZAA 1NJKA 2BI0A 3BJKA 4K49A 1ZKIA 4KEHA 5EGLA 2O5UA 3B7KA 3KH8A 4AE8A 2C2IA 3QY3A 4QD9A 3ZH7A 4B8UA 1TBUA 3HM0A 3AZ9A 3KVUA 3R3CA 1SBKA 4K4AA 5SZZA 3QOOA 3DP1A 3GEKA 3DP0A 5F6RA 2B6EA 3D6LA 4B0JA 5HMCA 4GAKA 3P2SA 3KW1A 5SZUA 4NCPA 2F0XA 3D04A 3DP2A 3R3DA 3BBJA 5T06A 1IQ6A 2OAFA 2W3XA 3EL6A 4QD7A 3R3BA 4HZOA 4RLWA 4QFWA 3KVZA 2DSLA 3LW3A 3R34A 3KHPA 4GAHA 4R4UA 2CWZA 2OV9A 3EXZA 5BUYA 1Q4SA 2OWNA 3KV8A 4RV2B 4M20A 3E8PA 3LBEA 4QD8A 1SH8A 5DM5A 5HMBA 1WLUA 4A0YA 1Q4UA 3E29A 2GF6A 1U1ZA 3Q62A 3HRQA 5T07A 4RLJA 4CL6A 2QWZA 3R36A 1OHFA 4K02A 4RV2A 4E3EA 4A12A 1Z6BA 3OMLA 3DOYA 2PIMA 4H4GA 5CPGA 3IR3A 2EGRA 3LZ7A 4K00A 3NWZA 4I83A 1BVQA 3CK1A 3R32A 3KV7A 3BNVA 2O6UA 3R3AA 2OIWA 1YOCA 3R87A 2O6TA 2CYEA 3DP3A 3P2QA 5KKUA 2Q2BA 3KG8A 4A0XA 2EGIA 4QDBA 5SZYA 3HRRA 2V1OA 2OKHA 5T02A 3P2RA 2O6BA 4QDAA 3S6PA 1PN2A 2AV9A 5HD6A 4I82A 4RMMA 5KL9A 2EISA 4FQ9A 2FS2A 1Q4TA 3WEWA 5E1VA 3AZ8A 3KX7A 5EO4A 3R3FA 1J1YA 1LO9A 4RLUB 4YBVA 5BP3A 4ZRBA 4A0ZA 3F1TA 1VI8A 1ZHGA 4I45A 4MOBA 3F5OA 4U3VA 2PZHA 3P3FA 1C8UA 3ED0A
chains in the Genus database with same CATH topology
3RQBA 3ZH5A 3RD7A 2UV8G 4OOCA 3CJYA 2QQPA 5KKUA 3KG7A 3HMJG 3KG8A 3B18A 3BBJA 2VZ8A 3EL6A 3HRRA 4LN9A 4KC5A 4QFWA 4R4UA 5BP2A 2VKZG 3FRNA 2PFCA 3KG6A 3S6PA 2VZ9A 3ZH6A 3U0AA 3ZH7B 3HRQA 1OHFA 3KG9A 5E1VA 5BP3A 4R9ZA 4U3VA 3ZH7A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2VZ9 A;  5E1V A;  2VZ8 A;  3EL6 A;  3HRR A;  4LN9 A;  4KC5 A;  5BP2 A;  5BP3 A;  4OOC A;  4U3V A;  3KG6 A;  3HRQ A;  5KKU A;  3KG7 A;  3KG9 A; 
#chains in the Genus database with same CATH topology
 3ESI A;  3CF9 A;  5HWF A;  4MZQ A;  3ZH5 A;  3HDU A;  3KUW A;  1WM6 A;  3CF8 A;  4RLU A;  4IEN A;  1Z54 A;  5EO2 A;  2XEM A;  5EP5 A;  5BUW A;  4OOB A;  4B0B A;  2QQP A;  5EGK A;  4AE7 A;  3B18 A;  2GLM A;  2F3X A;  1PSU A;  1VH5 A;  3AZB A;  3B7J A;  3DOZ A;  3KX8 A;  3DKZ A;  4LN9 A;  4B0I A;  5BP2 A;  1Y7U A;  2F41 A;  2GLL A;  1VH9 A;  2ESS A;  1S5U A;  1LO8 A;  2PFC A;  3KG6 A;  2VKZ G;  3D6X A;  3E1E A;  1WN3 A;  2CY9 A;  2HBO A;  2VZ9 A;  3R35 A;  4RLT B;  1WLV A;  2FUJ A;  2GLV A;  5EGJ A;  5BUX A;  2NUJ A;  3LMB A;  4ZV3 A;  1YLI A;  4ORD A;  2H4U A;  4WNB B;  2HX5 A;  4ZW0 A;  4ZRF A;  3KG9 A;  4K4C A;  4RLT A;  4HZN A;  2Q78 A;  1LO7 A;  3LWG A;  5BYU A;  1SC0 A;  3K67 A;  5HZ4 A;  4K4D A;  4W78 B;  4R9Z A;  4ZJB A;  1MKB A;  4WNB A;  1T82 A;  4RLW B;  4K4B A;  4XY6 A;  3RQB A;  4MOC A;  3TEA A;  3KUV A;  4FFU A;  3RD7 A;  2UV8 G;  4HZP A;  1MKA A;  2EGJ A;  4B0C A;  2OKI A;  4OOC A;  3CJY A;  2PRX A;  4W78 A;  4XY5 A;  3KG7 A;  3HMJ G;  2VZ8 A;  1S9C A;  1IXL A;  2XFL A;  4KC5 A;  3S4K A;  4RLJ B;  2HLJ A;  1PN4 A;  3FRN A;  3R37 A;  1Q6W A;  3LBB A;  5SZV A;  2B3M A;  5DIO A;  3ZH6 A;  3U0A A;  3SPS A;  3KVI A;  3ZH7 B;  1VPM A;  4MTU A;  2GVH A;  2GLP A;  3P3I A;  2QQ2 A;  4I4J A;  3AZA A;  1NJK A;  2BI0 A;  3BJK A;  4K49 A;  1ZKI A;  4KEH A;  5EGL A;  2O5U A;  3B7K A;  3KH8 A;  4AE8 A;  2C2I A;  3QY3 A;  4QD9 A;  3ZH7 A;  4B8U A;  1TBU A;  3HM0 A;  3AZ9 A;  3KVU A;  3R3C A;  1SBK A;  4K4A A;  5SZZ A;  3QOO A;  3DP1 A;  3GEK A;  3DP0 A;  5F6R A;  2B6E A;  3D6L A;  4B0J A;  5HMC A;  4GAK A;  3P2S A;  3KW1 A;  5SZU A;  4NCP A;  2F0X A;  3D04 A;  3DP2 A;  3R3D A;  3BBJ A;  5T06 A;  1IQ6 A;  2OAF A;  2W3X A;  3EL6 A;  4QD7 A;  3R3B A;  4HZO A;  4RLW A;  4QFW A;  3KVZ A;  2DSL A;  3LW3 A;  3R34 A;  3KHP A;  4GAH A;  4R4U A;  2CWZ A;  2OV9 A;  3EXZ A;  5BUY A;  1Q4S A;  2OWN A;  3KV8 A;  4RV2 B;  4M20 A;  3E8P A;  3LBE A;  4QD8 A;  1SH8 A;  5DM5 A;  5HMB A;  1WLU A;  4A0Y A;  1Q4U A;  3E29 A;  2GF6 A;  1U1Z A;  3Q62 A;  3HRQ A;  5T07 A;  4RLJ A;  4CL6 A;  2QWZ A;  3R36 A;  1OHF A;  4K02 A;  4RV2 A;  4E3E A;  4A12 A;  1Z6B A;  3OML A;  3DOY A;  2PIM A;  4H4G A;  5CPG A;  3IR3 A;  2EGR A;  3LZ7 A;  4K00 A;  3NWZ A;  4I83 A;  1BVQ A;  3CK1 A;  3R32 A;  3KV7 A;  3BNV A;  2O6U A;  3R3A A;  2OIW A;  1YOC A;  3R87 A;  2O6T A;  2CYE A;  3DP3 A;  3P2Q A;  5KKU A;  2Q2B A;  3KG8 A;  4A0X A;  2EGI A;  4QDB A;  5SZY A;  3HRR A;  2V1O A;  2OKH A;  5T02 A;  3P2R A;  2O6B A;  4QDA A;  3S6P A;  1PN2 A;  2AV9 A;  5HD6 A;  4I82 A;  4RMM A;  5KL9 A;  2EIS A;  4FQ9 A;  2FS2 A;  1Q4T A;  3WEW A;  5E1V A;  3AZ8 A;  3KX7 A;  5EO4 A;  3R3F A;  1J1Y A;  1LO9 A;  4RLU B;  4YBV A;  5BP3 A;  4ZRB A;  4A0Z A;  3F1T A;  1VI8 A;  1ZHG A;  4I45 A;  4MOB A;  3F5O A;  4U3V A;  2PZH A;  3P3F A;  1C8U A;  3ED0 A; 
#chains in the Genus database with same CATH homology
 3RQB A;  3ZH5 A;  3RD7 A;  2UV8 G;  4OOC A;  3CJY A;  2QQP A;  5KKU A;  3KG7 A;  3HMJ G;  3KG8 A;  3B18 A;  3BBJ A;  2VZ8 A;  3EL6 A;  3HRR A;  4LN9 A;  4KC5 A;  4QFW A;  4R4U A;  5BP2 A;  2VKZ G;  3FRN A;  2PFC A;  3KG6 A;  3S6P A;  2VZ9 A;  3ZH6 A;  3U0A A;  3ZH7 B;  3HRQ A;  1OHF A;  3KG9 A;  5E1V A;  5BP3 A;  4R9Z A;  4U3V A;  3ZH7 A; 
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