4R9ZA

Mycobacterium avium subs paratuberculosis tesb protein map1729c
Total Genus 67

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
269
structure length
245
Chain Sequence
SLGDVLATLELERVGQWRFVGQQLPAPANHILGGHISAQALLAASRTAAGREPHSVHTYFLRPGDSRQPVDFEVVDLQEGRTFSARRVTARQDDKILMEAMSSFKVQVVYQPIMPEAPSPESLASLRWFERRTIETETVPPARVPMWWRPDGRVPDDPVLTASLVAYMSAVTLTEPAFAARGGVGASAQRDHSVWFHGRAVLSDWLFYDRSSPSSAGSLALASGTMFNRTGELVCTVKQEMYFPP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (5-12)TI1 (18-21)S1 (15-18)S4 (73-82)TVIII1 (69-72)S2 (21-24)TI2 (68-71)3H1 (30-32)AH2 (36-50)S5 (86-95)TII1 (51-54)AH3 (185-208)EMPTYS6 (98-108)TIV1 (83-86)TIV2 (94-97)TIV3 (151-154)3H2 (129-131)S8 (173-177)S7 (156-160)TVIa1 (166-169)TIV6 (208-211)S9 (215-223)TI3 (228-231)TIV7 (229-232)S3 (55-63)TIV5 (177-180)S10 (233-243)Updating...
connected with : NaN
molecule tags Hydrolase
source organism Mycobacterium avium subsp. paratuberculosis
publication title Mycobacterium avium subs paratuberculosis tesB protein MAP1729c
rcsb
molecule keywords Uncharacterized protein
total genus 67
structure length 245
sequence length 269
chains with identical sequence B
ec nomenclature
pdb deposition date 2014-09-08

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF13622 4HBT_3 Thioesterase-like superfamily
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.10.129.90 Alpha Beta Roll Thiol Ester Dehydrase; Chain A Thiol Ester Dehydrase; Chain A 4r9zA00
3RD7A 3BBJA 3U0AA 3RQBA 4QFWA 4R4UA 3CJYA 4R9ZA
chains in the Genus database with same CATH superfamily
3S4KA 1PN4A 2UV8G 4I83A 4KC5A 5EGJA 5SZYA 4K4DA 3AZBA 5F6RA 3KW1A 3LW3A 2ESSA 4GAHA 4B0BA 3EL6A 1SBKA 4XY5A 4R9ZA 2B6EA 4WNBA 5BP2A 1LO7A 4E3EA 4AE8A 1TBUA 2C2IA 4ZRFA 3DKZA 4RV2B 4FFUA 3CJYA 1Q4TA 3KX7A 3ZH7B 4RLUA 2HLJA 3KVZA 3QOOA 4RLTB 3HMJG 2PRXA 3RD7A 2O5UA 4RLWA 2GF6A 3LWGA 5BUWA 5SZVA 2PFCA 2O6UA 4W78A 2GLVA 3CK1A 5BP3A 2OAFA 4OOCA 4QD7A 1Q4UA 3KUVA 2BI0A 4K02A 4ZRBA 4KEHA 3AZ8A 3EXZA 2QQ2A 1NJKA 3B18A 3KG9A 5T06A 3HRRA 1IQ6A 2CY9A 4MOCA 4QFWA 2EGJA 5BUXA 3DP2A 3R3BA 2HBOA 4HZPA 2XFLA 1Y7UA 1YOCA 3R36A 1ZHGA 3R87A 2HX5A 1WM6A 3BBJA 1SC0A 4RLUB 3AZAA 3KG6A 2Q2BA 2OWNA 3P2RA 1LO9A 3FRNA 2OKIA 3R3AA 3R3DA 4RLJB 3F5OA 3R32A 3KVIA 3KUWA 5HZ4A 1YLIA 3B7JA 2VKZG 4U3VA 1S9CA 3F1TA 1OHFA 1VI8A 3R34A 2PIMA 3OMLA 2GLPA 3D6LA 2EGIA 3BJKA 2AV9A 4AE7A 1MKBA 3GEKA 4ORDA 5CPGA 4LN9A 1Q4SA 5KKUA 2VZ8A 1SH8A 2VZ9A 3B7KA 1WLUA 3LZ7A 2CWZA 3KV7A 4QDAA 2V1OA 3K67A 3R37A 4MOBA 4WNBB 3DOZA 2FUJA 3HDUA 3HM0A 3AZ9A 3DOYA 3HRQA 3IR3A 3KV8A 3P3FA 3CF9A 4A0XA 4NCPA 1LO8A 1VH9A 2GLLA 3S6PA 3KG8A 4ZV3A 1BVQA 2GLMA 2GVHA 4RMMA 5SZUA 5HMCA 4A12A 4MZQA 4RLWB 3P2SA 1ZKIA 3ZH7A 2FS2A 2H4UA 3R3CA 2CYEA 3E29A 3KHPA 4RLTA 3LBBA 4W78B 3DP0A 1PSUA 4K49A 3KH8A 4ZJBA 3WEWA 2QQPA 2F3XA 3KVUA 4K4CA 1J1YA 2OIWA 4HZOA 5HD6A 3BNVA 5SZZA 3TEAA 4B0IA 2F41A 5EP5A 3RQBA 1PN2A 1VPMA 1C8UA 3P3IA 3DP1A 1U1ZA 4HZNA 4K00A 4M20A 3SPSA 3NWZA 4FQ9A 2NUJA 1MKAA 5EGLA 3E8PA 1IXLA 1Z6BA 2OV9A 4K4AA 2OKHA 5E1VA 5EGKA 3ZH5A 3ZH6A 1VH5A 4H4GA 4CL6A 4GAKA 4B8UA 5DIOA 5BYUA 5KL9A 2O6BA 4QD8A 4QDBA 3D6XA 4ZW0A 5T02A 3QY3A 4MTUA 4IENA 4QD9A 2XEMA 4K4BA 4A0YA 3U0AA 4R4UA 4YBVA 2W3XA 1T82A 3Q62A 1Z54A 5HWFA 3LBEA 5EO4A 5T07A 2O6TA 5HMBA 4I4JA 4RV2A 4RLJA 2DSLA 1WLVA 3DP3A 3ED0A 2EISA 5EO2A 2QWZA 3E1EA 3KG7A 4I82A 4B0CA 2B3MA 3CF8A 3KX8A 3R35A 2EGRA 1Q6WA 3LMBA 2Q78A 4OOBA 4B0JA 1S5UA 4XY6A 2PZHA 3P2QA 5DM5A 4A0ZA 2F0XA 4I45A 3R3FA 3ESIA 3D04A 5BUYA 1WN3A
chains in the Genus database with same CATH topology
2UV8G 3B18A 3KG9A 4KC5A 3ZH6A 3HRRA 5E1VA 3ZH5A 4QFWA 3EL6A 4R9ZA 3HRQA 5BP2A 3BBJA 3S6PA 3U0AA 4R4UA 3KG6A 3KG8A 3CJYA 3FRNA 3ZH7B 3HMJG 2VKZG 3RD7A 4U3VA 3ZH7A 1OHFA 3KG7A 2QQPA 2PFCA 5BP3A 4OOCA 4LN9A 3RQBA 5KKUA 2VZ8A 2VZ9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3RD7 A;  3BBJ A;  3U0A A;  3RQB A;  4QFW A;  4R4U A;  3CJY A;  4R9Z A; 
#chains in the Genus database with same CATH topology
 3S4K A;  1PN4 A;  2UV8 G;  4I83 A;  4KC5 A;  5EGJ A;  5SZY A;  4K4D A;  3AZB A;  5F6R A;  3KW1 A;  3LW3 A;  2ESS A;  4GAH A;  4B0B A;  3EL6 A;  1SBK A;  4XY5 A;  4R9Z A;  2B6E A;  4WNB A;  5BP2 A;  1LO7 A;  4E3E A;  4AE8 A;  1TBU A;  2C2I A;  4ZRF A;  3DKZ A;  4RV2 B;  4FFU A;  3CJY A;  1Q4T A;  3KX7 A;  3ZH7 B;  4RLU A;  2HLJ A;  3KVZ A;  3QOO A;  4RLT B;  3HMJ G;  2PRX A;  3RD7 A;  2O5U A;  4RLW A;  2GF6 A;  3LWG A;  5BUW A;  5SZV A;  2PFC A;  2O6U A;  4W78 A;  2GLV A;  3CK1 A;  5BP3 A;  2OAF A;  4OOC A;  4QD7 A;  1Q4U A;  3KUV A;  2BI0 A;  4K02 A;  4ZRB A;  4KEH A;  3AZ8 A;  3EXZ A;  2QQ2 A;  1NJK A;  3B18 A;  3KG9 A;  5T06 A;  3HRR A;  1IQ6 A;  2CY9 A;  4MOC A;  4QFW A;  2EGJ A;  5BUX A;  3DP2 A;  3R3B A;  2HBO A;  4HZP A;  2XFL A;  1Y7U A;  1YOC A;  3R36 A;  1ZHG A;  3R87 A;  2HX5 A;  1WM6 A;  3BBJ A;  1SC0 A;  4RLU B;  3AZA A;  3KG6 A;  2Q2B A;  2OWN A;  3P2R A;  1LO9 A;  3FRN A;  2OKI A;  3R3A A;  3R3D A;  4RLJ B;  3F5O A;  3R32 A;  3KVI A;  3KUW A;  5HZ4 A;  1YLI A;  3B7J A;  2VKZ G;  4U3V A;  1S9C A;  3F1T A;  1OHF A;  1VI8 A;  3R34 A;  2PIM A;  3OML A;  2GLP A;  3D6L A;  2EGI A;  3BJK A;  2AV9 A;  4AE7 A;  1MKB A;  3GEK A;  4ORD A;  5CPG A;  4LN9 A;  1Q4S A;  5KKU A;  2VZ8 A;  1SH8 A;  2VZ9 A;  3B7K A;  1WLU A;  3LZ7 A;  2CWZ A;  3KV7 A;  4QDA A;  2V1O A;  3K67 A;  3R37 A;  4MOB A;  4WNB B;  3DOZ A;  2FUJ A;  3HDU A;  3HM0 A;  3AZ9 A;  3DOY A;  3HRQ A;  3IR3 A;  3KV8 A;  3P3F A;  3CF9 A;  4A0X A;  4NCP A;  1LO8 A;  1VH9 A;  2GLL A;  3S6P A;  3KG8 A;  4ZV3 A;  1BVQ A;  2GLM A;  2GVH A;  4RMM A;  5SZU A;  5HMC A;  4A12 A;  4MZQ A;  4RLW B;  3P2S A;  1ZKI A;  3ZH7 A;  2FS2 A;  2H4U A;  3R3C A;  2CYE A;  3E29 A;  3KHP A;  4RLT A;  3LBB A;  4W78 B;  3DP0 A;  1PSU A;  4K49 A;  3KH8 A;  4ZJB A;  3WEW A;  2QQP A;  2F3X A;  3KVU A;  4K4C A;  1J1Y A;  2OIW A;  4HZO A;  5HD6 A;  3BNV A;  5SZZ A;  3TEA A;  4B0I A;  2F41 A;  5EP5 A;  3RQB A;  1PN2 A;  1VPM A;  1C8U A;  3P3I A;  3DP1 A;  1U1Z A;  4HZN A;  4K00 A;  4M20 A;  3SPS A;  3NWZ A;  4FQ9 A;  2NUJ A;  1MKA A;  5EGL A;  3E8P A;  1IXL A;  1Z6B A;  2OV9 A;  4K4A A;  2OKH A;  5E1V A;  5EGK A;  3ZH5 A;  3ZH6 A;  1VH5 A;  4H4G A;  4CL6 A;  4GAK A;  4B8U A;  5DIO A;  5BYU A;  5KL9 A;  2O6B A;  4QD8 A;  4QDB A;  3D6X A;  4ZW0 A;  5T02 A;  3QY3 A;  4MTU A;  4IEN A;  4QD9 A;  2XEM A;  4K4B A;  4A0Y A;  3U0A A;  4R4U A;  4YBV A;  2W3X A;  1T82 A;  3Q62 A;  1Z54 A;  5HWF A;  3LBE A;  5EO4 A;  5T07 A;  2O6T A;  5HMB A;  4I4J A;  4RV2 A;  4RLJ A;  2DSL A;  1WLV A;  3DP3 A;  3ED0 A;  2EIS A;  5EO2 A;  2QWZ A;  3E1E A;  3KG7 A;  4I82 A;  4B0C A;  2B3M A;  3CF8 A;  3KX8 A;  3R35 A;  2EGR A;  1Q6W A;  3LMB A;  2Q78 A;  4OOB A;  4B0J A;  1S5U A;  4XY6 A;  2PZH A;  3P2Q A;  5DM5 A;  4A0Z A;  2F0X A;  4I45 A;  3R3F A;  3ESI A;  3D04 A;  5BUY A;  1WN3 A; 
#chains in the Genus database with same CATH homology
 2UV8 G;  3B18 A;  3KG9 A;  4KC5 A;  3ZH6 A;  3HRR A;  5E1V A;  3ZH5 A;  4QFW A;  3EL6 A;  4R9Z A;  3HRQ A;  5BP2 A;  3BBJ A;  3S6P A;  3U0A A;  4R4U A;  3KG6 A;  3KG8 A;  3CJY A;  3FRN A;  3ZH7 B;  3HMJ G;  2VKZ G;  3RD7 A;  4U3V A;  3ZH7 A;  1OHF A;  3KG7 A;  2QQP A;  2PFC A;  5BP3 A;  4OOC A;  4LN9 A;  3RQB A;  5KKU A;  2VZ8 A;  2VZ9 A; 
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