9PTI | Genus

Total Genus 7

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	7
sequence length	58
structure length	57
Chain Sequence	RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCRTCGGA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Hydrolase inhibitor
source organism	Bos taurus
molecule keywords	BOVINE PANCREATIC TRYPSIN INHIBITOR
total genus	7
structure length	57
sequence length	58
ec nomenclature
pdb deposition date	1991-04-08

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF00014	Kunitz_BPTI	Kunitz/Bovine pancreatic trypsin inhibitor domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
4.10.410.10	Few Secondary Structures	Irregular	Factor Xa Inhibitor	Pancreatic trypsin inhibitor Kunitz domain	9ptiA00

3BTKI 1NAGA 1BPIA 1BZ5A 1IRHA 1DTKA 2DDJA 5JB4A 2FI4I 1TCPA 2M01A 1BRCI 4DG4C 1YLCB 3UIRC 3FP7J 4ISLB 1CBWD 3L3TE 3CI7A 1QLQA 1JC6A 1FANA 1YLDB 3AUHA 1UUBA 3OFWA 2HEXA 1BUNB 1JV9A 3BYBA 1T8NB 3BTGI 1P2OB 9PTIA 2TGPI 1B0CA 1KTHA 1P2KI 2KNTA 2ODYE 1T8OB 2LFLA 1BPTA 3BTQI 2DDIA 3LDMA 4BQDA 3GYMI 1AAPA 3L33E 1BRBI 1BTHP 3BTHI 3T62D 3AUCA 3TGKI 2FI3I 3BTTI 3P95E 1P2JI 4TPII 1DENA 4Y0ZI 1F7ZI 1UUAA 4BD9B 5C67C 1ADZA 3WNYA 8PTIA 1P2NB 2J6DA 4NTXB 3LDJA 4DTGK 1DEMA 1BIKA 1F5RI 2KCRA 5JB7A 3LDIA 2ZVXA 1KNTA 1P2II 1PITA 1TFXC 1TPAI 1LD6A 1G6XA 2JOTA 3M7QB 4U32X 4WWYC 1BZXI 1TAPA 3AUGA 4Y0YI 4BNRI 1KIGI 3BTDI 1T8LB 1EAWB 2FTMB 2UUXA 3UOUB 3BTFI 2CA7A 4PTIA 1K6UA 1TAWB 1FY8I 1YKTB 4Y10I 1P2MB 3D65I 3BTWI 4U30W 1YC0I 1CA0D 6PTIA 2W8XA 4NTYB 2ZJXA 1D0DB 2FTLI 2LFKA 1TOCR 3TGII 2KAII 3TGJI 3AUEA 1P2QB 1Y62A 5JB5A 2M99A 1D0DA 1JV8A 2TPII 2PTCI 1MTND 3BTMI 4NTWB 5PTIA 4WXVC 2UUYB 4Y11I 1SHPA 1FAKI 1ZR0B 2R9PE 3FP8I 1T7CB 3FP6I 2FI5I 1AALA 3TPII 1LD5A 1BTIA 3BTEI 3U1JE 3AUBA 2IJOI 7PTIA 3AUDA 1DTXA 1OA65 5JB6A 1OA55 1ZJDB 2RA3C 1KUNA 3P92E 4ISOB 1BHCA 1T8MB 1BF0A 4ISNB 1CO7I 3AUIA 1EJMB 3OTJI
chains in the Genus database with same CATH superfamily

#chains in the Genus database with same CATH superfamily
 3BTK I;  1NAG A;  1BPI A;  1BZ5 A;  1IRH A;  1DTK A;  2DDJ A;  5JB4 A;  2FI4 I;  1TCP A;  2M01 A;  1BRC I;  4DG4 C;  1YLC B;  3UIR C;  3FP7 J;  4ISL B;  1CBW D;  3L3T E;  3CI7 A;  1QLQ A;  1JC6 A;  1FAN A;  1YLD B;  3AUH A;  1UUB A;  3OFW A;  2HEX A;  1BUN B;  1JV9 A;  3BYB A;  1T8N B;  3BTG I;  1P2O B;  9PTI A;  2TGP I;  1B0C A;  1KTH A;  1P2K I;  2KNT A;  2ODY E;  1T8O B;  2LFL A;  1BPT A;  3BTQ I;  2DDI A;  3LDM A;  4BQD A;  3GYM I;  1AAP A;  3L33 E;  1BRB I;  1BTH P;  3BTH I;  3T62 D;  3AUC A;  3TGK I;  2FI3 I;  3BTT I;  3P95 E;  1P2J I;  4TPI I;  1DEN A;  4Y0Z I;  1F7Z I;  1UUA A;  4BD9 B;  5C67 C;  1ADZ A;  3WNY A;  8PTI A;  1P2N B;  2J6D A;  4NTX B;  3LDJ A;  4DTG K;  1DEM A;  1BIK A;  1F5R I;  2KCR A;  5JB7 A;  3LDI A;  2ZVX A;  1KNT A;  1P2I I;  1PIT A;  1TFX C;  1TPA I;  1LD6 A;  1G6X A;  2JOT A;  3M7Q B;  4U32 X;  4WWY C;  1BZX I;  1TAP A;  3AUG A;  4Y0Y I;  4BNR I;  1KIG I;  3BTD I;  1T8L B;  1EAW B;  2FTM B;  2UUX A;  3UOU B;  3BTF I;  2CA7 A;  4PTI A;  1K6U A;  1TAW B;  1FY8 I;  1YKT B;  4Y10 I;  1P2M B;  3D65 I;  3BTW I;  4U30 W;  1YC0 I;  1CA0 D;  6PTI A;  2W8X A;  4NTY B;  2ZJX A;  1D0D B;  2FTL I;  2LFK A;  1TOC R;  3TGI I;  2KAI I;  3TGJ I;  3AUE A;  1P2Q B;  1Y62 A;  5JB5 A;  2M99 A;  1D0D A;  1JV8 A;  2TPI I;  2PTC I;  1MTN D;  3BTM I;  4NTW B;  5PTI A;  4WXV C;  2UUY B;  4Y11 I;  1SHP A;  1FAK I;  1ZR0 B;  2R9P E;  3FP8 I;  1T7C B;  3FP6 I;  2FI5 I;  1AAL A;  3TPI I;  1LD5 A;  1BTI A;  3BTE I;  3U1J E;  3AUB A;  2IJO I;  7PTI A;  3AUD A;  1DTX A;  1OA6 5;  5JB6 A;  1OA5 5;  1ZJD B;  2RA3 C;  1KUN A;  3P92 E;  4ISO B;  1BHC A;  1T8M B;  1BF0 A;  4ISN B;  1CO7 I;  3AUI A;  1EJM B;  3OTJ I; 
#chains in the Genus database with same CATH topology
 3BTK I;  1NAG A;  1BPI A;  1BZ5 A;  1IRH A;  1DTK A;  2DDJ A;  5JB4 A;  2FI4 I;  1TCP A;  2M01 A;  1BRC I;  4DG4 C;  1YLC B;  3UIR C;  3FP7 J;  4ISL B;  1CBW D;  3L3T E;  3CI7 A;  1QLQ A;  1JC6 A;  1FAN A;  1YLD B;  3AUH A;  1UUB A;  3OFW A;  2HEX A;  1BUN B;  1JV9 A;  3BYB A;  1T8N B;  3BTG I;  1P2O B;  9PTI A;  2TGP I;  1B0C A;  1KTH A;  1P2K I;  2KNT A;  2ODY E;  1T8O B;  2LFL A;  1BPT A;  3BTQ I;  2DDI A;  3LDM A;  4BQD A;  3GYM I;  1AAP A;  3L33 E;  1BRB I;  1BTH P;  3BTH I;  3T62 D;  3AUC A;  3TGK I;  2FI3 I;  3BTT I;  3P95 E;  1P2J I;  4TPI I;  1DEN A;  4Y0Z I;  1F7Z I;  1UUA A;  4BD9 B;  5C67 C;  1ADZ A;  3WNY A;  8PTI A;  1P2N B;  2J6D A;  4NTX B;  3LDJ A;  4DTG K;  1DEM A;  1BIK A;  1F5R I;  2KCR A;  5JB7 A;  3LDI A;  2ZVX A;  1KNT A;  1P2I I;  1PIT A;  1TFX C;  1TPA I;  1LD6 A;  1G6X A;  2JOT A;  3M7Q B;  4U32 X;  4WWY C;  1BZX I;  1TAP A;  3AUG A;  4Y0Y I;  4BNR I;  1KIG I;  3BTD I;  1T8L B;  1EAW B;  2FTM B;  2UUX A;  3UOU B;  3BTF I;  2CA7 A;  4PTI A;  1K6U A;  1TAW B;  1FY8 I;  1YKT B;  4Y10 I;  1P2M B;  3D65 I;  3BTW I;  4U30 W;  1YC0 I;  1CA0 D;  6PTI A;  2W8X A;  4NTY B;  2ZJX A;  1D0D B;  2FTL I;  2LFK A;  1TOC R;  3TGI I;  2KAI I;  3TGJ I;  3AUE A;  1P2Q B;  1Y62 A;  5JB5 A;  2M99 A;  1D0D A;  1JV8 A;  2TPI I;  2PTC I;  1MTN D;  3BTM I;  4NTW B;  5PTI A;  4WXV C;  2UUY B;  4Y11 I;  1SHP A;  1FAK I;  1ZR0 B;  2R9P E;  3FP8 I;  1T7C B;  3FP6 I;  2FI5 I;  1AAL A;  3TPI I;  1LD5 A;  1BTI A;  3BTE I;  3U1J E;  3AUB A;  2IJO I;  7PTI A;  3AUD A;  1DTX A;  1OA6 5;  5JB6 A;  1OA5 5;  1ZJD B;  2RA3 C;  1KUN A;  3P92 E;  4ISO B;  1BHC A;  1T8M B;  1BF0 A;  4ISN B;  1CO7 I;  3AUI A;  1EJM B;  3OTJ I; 
#chains in the Genus database with same CATH homology
 3BTK I;  1NAG A;  1BPI A;  1BZ5 A;  1IRH A;  1DTK A;  2DDJ A;  5JB4 A;  2FI4 I;  1TCP A;  2M01 A;  1BRC I;  4DG4 C;  1YLC B;  3UIR C;  3FP7 J;  4ISL B;  1CBW D;  3L3T E;  3CI7 A;  1QLQ A;  1JC6 A;  1FAN A;  1YLD B;  3AUH A;  1UUB A;  3OFW A;  2HEX A;  1BUN B;  1JV9 A;  3BYB A;  1T8N B;  3BTG I;  1P2O B;  9PTI A;  2TGP I;  1B0C A;  1KTH A;  1P2K I;  2KNT A;  2ODY E;  1T8O B;  2LFL A;  1BPT A;  3BTQ I;  2DDI A;  3LDM A;  4BQD A;  3GYM I;  1AAP A;  3L33 E;  1BRB I;  1BTH P;  3BTH I;  3T62 D;  3AUC A;  3TGK I;  2FI3 I;  3BTT I;  3P95 E;  1P2J I;  4TPI I;  1DEN A;  4Y0Z I;  1F7Z I;  1UUA A;  4BD9 B;  5C67 C;  1ADZ A;  3WNY A;  8PTI A;  1P2N B;  2J6D A;  4NTX B;  3LDJ A;  4DTG K;  1DEM A;  1BIK A;  1F5R I;  2KCR A;  5JB7 A;  3LDI A;  2ZVX A;  1KNT A;  1P2I I;  1PIT A;  1TFX C;  1TPA I;  1LD6 A;  1G6X A;  2JOT A;  3M7Q B;  4U32 X;  4WWY C;  1BZX I;  1TAP A;  3AUG A;  4Y0Y I;  4BNR I;  1KIG I;  3BTD I;  1T8L B;  1EAW B;  2FTM B;  2UUX A;  3UOU B;  3BTF I;  2CA7 A;  4PTI A;  1K6U A;  1TAW B;  1FY8 I;  1YKT B;  4Y10 I;  1P2M B;  3D65 I;  3BTW I;  4U30 W;  1YC0 I;  1CA0 D;  6PTI A;  2W8X A;  4NTY B;  2ZJX A;  1D0D B;  2FTL I;  2LFK A;  1TOC R;  3TGI I;  2KAI I;  3TGJ I;  3AUE A;  1P2Q B;  1Y62 A;  5JB5 A;  2M99 A;  1D0D A;  1JV8 A;  2TPI I;  2PTC I;  1MTN D;  3BTM I;  4NTW B;  5PTI A;  4WXV C;  2UUY B;  4Y11 I;  1SHP A;  1FAK I;  1ZR0 B;  2R9P E;  3FP8 I;  1T7C B;  3FP6 I;  2FI5 I;  1AAL A;  3TPI I;  1LD5 A;  1BTI A;  3BTE I;  3U1J E;  3AUB A;  2IJO I;  7PTI A;  3AUD A;  1DTX A;  1OA6 5;  5JB6 A;  1OA5 5;  1ZJD B;  2RA3 C;  1KUN A;  3P92 E;  4ISO B;  1BHC A;  1T8M B;  1BF0 A;  4ISN B;  1CO7 I;  3AUI A;  1EJM B;  3OTJ I;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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9PTIA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations