4FO7A

Pseudomonas aeruginosa metap, in mn form
Total Genus 74
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
74
sequence length
258
structure length
258
Chain Sequence
TVTIKTPDDIEKMRIAGRLAAEVLEMIGEHIKPGVTTEELDRICHDYIVNEQKAIPAPLNYKGFPKSICTSINHVVCHGIPNEKPLKEGDILNVDITVIKDGYHGDTSKMFLVGKTPEWADRLCQITQECMYKGISVVRPGAHLGDIGEIIQKHAEKNGFSVVREYCGHGIGKVFHEEPQVLHYGRAGTGIELKEGMIFTIEPMINQGRPETRLLGDGWTAITKDRKLSAQWEHTVLVTADGYEILTLRNDETFPRTS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase
molecule keywords Methionine aminopeptidase
publication title Methionine excision captured by the structures of a methionine aminopeptidase
rcsb
source organism Pseudomonas aeruginosa
total genus 74
structure length 258
sequence length 258
chains with identical sequence B, C, D
ec nomenclature ec 3.4.11.18: Methionyl aminopeptidase.
pdb deposition date 2012-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4fo7A00
4U1BA 5CDEA 1WY2A 2P98A 3CTZA 2Q95A 2Q94A 3PKBA 2EVMA 2V3XA 4JUQA 2BWSA 4FUKA 1C24A 2Q8KA 2Q92A 3CB6A 3L7GA 1WKMA 4FO8A 4OOKA 4A6VA 2GA2A 1YW9A 4HXXA 1WL6A 3Q6DA 4U6ZA 4FO7A 3TAVA 2B3LA 2GU5A 3RORA 2BWYA 2BH3A 2V3ZA 4MATA 2GG9A 4RZYA 4R60A 2BB7A 5CDVA 2BN7A 4U71A 2IW2A 3BIQA 4IKTA 4ZWPA 5CNXA 1KQ0A 2OAZA 2GG5A 4RGZ1 1KP0A 1YW8A 2GG0A 5JFRA 4U6EA 2BHBA 4U6JA 2BHAA 4U75A 2B3KA 4PV4A 5CE6A 1R5HA 5CDLA 5CLSA 1WL9A 3PKEA 1Y1NA 1XGOA 3IU9A 1A16A 4IKRA 4S00A 4U6CA 4IKSA 2B3HA 4RZZA 4U6WA 2GG7A 1W2MA 3L24A 3TB5A 1YW7A 3BITA 2P99A 4ZNGA 1R58A 2BWUA 4EGEA 2HOWA 2GZ5A 5FCFA 4U69A 3S6BA 2Q93A 2P9AA 1YJ3A 5FCHA 2GG8A 1XGNA 3PKCA 2GGCA 4PNCA 1XGMA 2BHCA 2NQ6A 4IECA 2GG3A 2DFIA 1BN5A 4B28A 3MX6A 3RVAA 1XGSA 2GU6A 5D6EA 2EVCA 5D6FA 1C23A 2V3YA 2EA2A 2MATA 3FM3A 1B59A 4QR8A 3FMRA 4FLKA 1QZYA 1QXWA 1R5GA 4IF7A 1WBQA 4A6WA 4FLLA 4IKUA 1QXYA 1M35A 2Q96A 5E5BA 2BWWA 1O0XA 3MATA 4FLIA 1MATA 2G6PA 2ADUA 2GU7A 3IU8A 5JHUA 2BWTA 3FMQA 3MR1A 4S01A 1XNZA 4Z7MA 1BOAA 1QXZA 1KQ9A 2OKNA 2GGBA 4IU6A 3IU7A 2V6CA 2GU4A 1C27A 1PV9A 2BWVA 3PKDA 1JAWA 2BHDA 4KM3A 1WLRA 5CIKA 1YVMA 1C21A 2NQ7A 4S2RP 1W7VA 1B6AA 4U76A 3IG4A 1N51A 2GG2A 4IDYA 2EVOA 5JI6A 4ZWOA 2EA4A 4ZWUA 3PKAA 1CHMA 4S2TP 4FLJA 2BWXA 1WN1A 3D27A 4IPAA 2GTXA 4U70A 1C22A 3CB5A 3BIPA 2ZSGA 4U73A 4FKCA
chains in the Genus database with same CATH superfamily
4U1BA 5CDEA 1WY2A 2P98A 3CTZA 2Q95A 2Q94A 3PKBA 2EVMA 2V3XA 4JUQA 2BWSA 4FUKA 1C24A 2Q8KA 2Q92A 3CB6A 3L7GA 1WKMA 4FO8A 4OOKA 4A6VA 2GA2A 1YW9A 4HXXA 1WL6A 3Q6DA 4U6ZA 4FO7A 3TAVA 2B3LA 2GU5A 3RORA 2BWYA 2BH3A 2V3ZA 4MATA 2GG9A 4RZYA 4R60A 2BB7A 5CDVA 2BN7A 4U71A 2IW2A 3BIQA 4IKTA 4ZWPA 5CNXA 1KQ0A 2OAZA 2GG5A 4RGZ1 1KP0A 1YW8A 2GG0A 5JFRA 4U6EA 2BHBA 4U6JA 2BHAA 4U75A 2B3KA 4PV4A 5CE6A 1R5HA 5CDLA 5CLSA 1WL9A 3PKEA 1Y1NA 1XGOA 3IU9A 1A16A 4IKRA 4S00A 4U6CA 4IKSA 2B3HA 4RZZA 4U6WA 2GG7A 1W2MA 3L24A 3TB5A 1YW7A 3BITA 2P99A 4ZNGA 1R58A 2BWUA 4EGEA 2HOWA 2GZ5A 5FCFA 4U69A 3S6BA 2Q93A 2P9AA 1YJ3A 5FCHA 2GG8A 1XGNA 3PKCA 2GGCA 4PNCA 1XGMA 2BHCA 2NQ6A 4IECA 2GG3A 2DFIA 1BN5A 4B28A 3MX6A 3RVAA 1XGSA 2GU6A 5D6EA 2EVCA 5D6FA 1C23A 2V3YA 2EA2A 2MATA 3FM3A 1B59A 4QR8A 3FMRA 4FLKA 1QZYA 1QXWA 1R5GA 4IF7A 1WBQA 4A6WA 4FLLA 4IKUA 1QXYA 1M35A 2Q96A 5E5BA 2BWWA 1O0XA 3MATA 4FLIA 1MATA 2G6PA 2ADUA 2GU7A 3IU8A 5JHUA 2BWTA 3FMQA 3MR1A 4S01A 1XNZA 4Z7MA 1BOAA 1QXZA 1KQ9A 2OKNA 2GGBA 4IU6A 3IU7A 2V6CA 2GU4A 1C27A 1PV9A 2BWVA 3PKDA 1JAWA 2BHDA 4KM3A 1WLRA 5CIKA 1YVMA 1C21A 2NQ7A 4S2RP 1W7VA 1B6AA 4U76A 3IG4A 1N51A 2GG2A 4IDYA 2EVOA 5JI6A 4ZWOA 2EA4A 4ZWUA 3PKAA 1CHMA 4S2TP 4FLJA 2BWXA 1WN1A 3D27A 4IPAA 2GTXA 4U70A 1C22A 3CB5A 3BIPA 2ZSGA 4U73A 4FKCA
chains in the Genus database with same CATH topology
4U1BA 5CDEA 1WY2A 2P98A 3CTZA 2Q95A 2Q94A 3PKBA 2EVMA 2V3XA 4JUQA 2BWSA 4FUKA 1C24A 2Q8KA 2Q92A 3CB6A 3L7GA 1WKMA 4FO8A 4OOKA 4A6VA 2GA2A 1YW9A 4HXXA 1WL6A 3Q6DA 4U6ZA 4FO7A 3TAVA 2B3LA 2GU5A 3RORA 2BWYA 2BH3A 2V3ZA 4MATA 2GG9A 4RZYA 4R60A 2BB7A 5CDVA 2BN7A 4U71A 2IW2A 3BIQA 4IKTA 4ZWPA 5CNXA 1KQ0A 2OAZA 2GG5A 4RGZ1 1KP0A 1YW8A 2GG0A 5JFRA 4U6EA 2BHBA 4U6JA 2BHAA 4U75A 2B3KA 4PV4A 5CE6A 1R5HA 5CDLA 5CLSA 1WL9A 3PKEA 1Y1NA 1XGOA 3IU9A 1A16A 4IKRA 4S00A 4U6CA 4IKSA 2B3HA 4RZZA 4U6WA 2GG7A 1W2MA 3L24A 3TB5A 1YW7A 3BITA 2P99A 4ZNGA 1R58A 2BWUA 4EGEA 2HOWA 2GZ5A 5FCFA 4U69A 3S6BA 2Q93A 2P9AA 1YJ3A 5FCHA 2GG8A 1XGNA 3PKCA 2GGCA 4PNCA 1XGMA 2BHCA 2NQ6A 4IECA 2GG3A 2DFIA 1BN5A 4B28A 3MX6A 3RVAA 1XGSA 2GU6A 5D6EA 2EVCA 5D6FA 1C23A 2V3YA 2EA2A 2MATA 3FM3A 1B59A 4QR8A 3FMRA 4FLKA 1QZYA 1QXWA 1R5GA 4IF7A 1WBQA 4A6WA 4FLLA 4IKUA 1QXYA 1M35A 2Q96A 5E5BA 2BWWA 1O0XA 3MATA 4FLIA 1MATA 2G6PA 2ADUA 2GU7A 3IU8A 5JHUA 2BWTA 3FMQA 3MR1A 4S01A 1XNZA 4Z7MA 1BOAA 1QXZA 1KQ9A 2OKNA 2GGBA 4IU6A 3IU7A 2V6CA 2GU4A 1C27A 1PV9A 2BWVA 3PKDA 1JAWA 2BHDA 4KM3A 1WLRA 5CIKA 1YVMA 1C21A 2NQ7A 4S2RP 1W7VA 1B6AA 4U76A 3IG4A 1N51A 2GG2A 4IDYA 2EVOA 5JI6A 4ZWOA 2EA4A 4ZWUA 3PKAA 1CHMA 4S2TP 4FLJA 2BWXA 1WN1A 3D27A 4IPAA 2GTXA 4U70A 1C22A 3CB5A 3BIPA 2ZSGA 4U73A 4FKCA
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 4U1B A;  5CDE A;  1WY2 A;  2P98 A;  3CTZ A;  2Q95 A;  2Q94 A;  3PKB A;  2EVM A;  2V3X A;  4JUQ A;  2BWS A;  4FUK A;  1C24 A;  2Q8K A;  2Q92 A;  3CB6 A;  3L7G A;  1WKM A;  4FO8 A;  4OOK A;  4A6V A;  2GA2 A;  1YW9 A;  4HXX A;  1WL6 A;  3Q6D A;  4U6Z A;  4FO7 A;  3TAV A;  2B3L A;  2GU5 A;  3ROR A;  2BWY A;  2BH3 A;  2V3Z A;  4MAT A;  2GG9 A;  4RZY A;  4R60 A;  2BB7 A;  5CDV A;  2BN7 A;  4U71 A;  2IW2 A;  3BIQ A;  4IKT A;  4ZWP A;  5CNX A;  1KQ0 A;  2OAZ A;  2GG5 A;  4RGZ 1;  1KP0 A;  1YW8 A;  2GG0 A;  5JFR A;  4U6E A;  2BHB A;  4U6J A;  2BHA A;  4U75 A;  2B3K A;  4PV4 A;  5CE6 A;  1R5H A;  5CDL A;  5CLS A;  1WL9 A;  3PKE A;  1Y1N A;  1XGO A;  3IU9 A;  1A16 A;  4IKR A;  4S00 A;  4U6C A;  4IKS A;  2B3H A;  4RZZ A;  4U6W A;  2GG7 A;  1W2M A;  3L24 A;  3TB5 A;  1YW7 A;  3BIT A;  2P99 A;  4ZNG A;  1R58 A;  2BWU A;  4EGE A;  2HOW A;  2GZ5 A;  5FCF A;  4U69 A;  3S6B A;  2Q93 A;  2P9A A;  1YJ3 A;  5FCH A;  2GG8 A;  1XGN A;  3PKC A;  2GGC A;  4PNC A;  1XGM A;  2BHC A;  2NQ6 A;  4IEC A;  2GG3 A;  2DFI A;  1BN5 A;  4B28 A;  3MX6 A;  3RVA A;  1XGS A;  2GU6 A;  5D6E A;  2EVC A;  5D6F A;  1C23 A;  2V3Y A;  2EA2 A;  2MAT A;  3FM3 A;  1B59 A;  4QR8 A;  3FMR A;  4FLK A;  1QZY A;  1QXW A;  1R5G A;  4IF7 A;  1WBQ A;  4A6W A;  4FLL A;  4IKU A;  1QXY A;  1M35 A;  2Q96 A;  5E5B A;  2BWW A;  1O0X A;  3MAT A;  4FLI A;  1MAT A;  2G6P A;  2ADU A;  2GU7 A;  3IU8 A;  5JHU A;  2BWT A;  3FMQ A;  3MR1 A;  4S01 A;  1XNZ A;  4Z7M A;  1BOA A;  1QXZ A;  1KQ9 A;  2OKN A;  2GGB A;  4IU6 A;  3IU7 A;  2V6C A;  2GU4 A;  1C27 A;  1PV9 A;  2BWV A;  3PKD A;  1JAW A;  2BHD A;  4KM3 A;  1WLR A;  5CIK A;  1YVM A;  1C21 A;  2NQ7 A;  4S2R P;  1W7V A;  1B6A A;  4U76 A;  3IG4 A;  1N51 A;  2GG2 A;  4IDY A;  2EVO A;  5JI6 A;  4ZWO A;  2EA4 A;  4ZWU A;  3PKA A;  1CHM A;  4S2T P;  4FLJ A;  2BWX A;  1WN1 A;  3D27 A;  4IPA A;  2GTX A;  4U70 A;  1C22 A;  3CB5 A;  3BIP A;  2ZSG A;  4U73 A;  4FKC A; 
#chains in the Genus database with same CATH topology
 4U1B A;  5CDE A;  1WY2 A;  2P98 A;  3CTZ A;  2Q95 A;  2Q94 A;  3PKB A;  2EVM A;  2V3X A;  4JUQ A;  2BWS A;  4FUK A;  1C24 A;  2Q8K A;  2Q92 A;  3CB6 A;  3L7G A;  1WKM A;  4FO8 A;  4OOK A;  4A6V A;  2GA2 A;  1YW9 A;  4HXX A;  1WL6 A;  3Q6D A;  4U6Z A;  4FO7 A;  3TAV A;  2B3L A;  2GU5 A;  3ROR A;  2BWY A;  2BH3 A;  2V3Z A;  4MAT A;  2GG9 A;  4RZY A;  4R60 A;  2BB7 A;  5CDV A;  2BN7 A;  4U71 A;  2IW2 A;  3BIQ A;  4IKT A;  4ZWP A;  5CNX A;  1KQ0 A;  2OAZ A;  2GG5 A;  4RGZ 1;  1KP0 A;  1YW8 A;  2GG0 A;  5JFR A;  4U6E A;  2BHB A;  4U6J A;  2BHA A;  4U75 A;  2B3K A;  4PV4 A;  5CE6 A;  1R5H A;  5CDL A;  5CLS A;  1WL9 A;  3PKE A;  1Y1N A;  1XGO A;  3IU9 A;  1A16 A;  4IKR A;  4S00 A;  4U6C A;  4IKS A;  2B3H A;  4RZZ A;  4U6W A;  2GG7 A;  1W2M A;  3L24 A;  3TB5 A;  1YW7 A;  3BIT A;  2P99 A;  4ZNG A;  1R58 A;  2BWU A;  4EGE A;  2HOW A;  2GZ5 A;  5FCF A;  4U69 A;  3S6B A;  2Q93 A;  2P9A A;  1YJ3 A;  5FCH A;  2GG8 A;  1XGN A;  3PKC A;  2GGC A;  4PNC A;  1XGM A;  2BHC A;  2NQ6 A;  4IEC A;  2GG3 A;  2DFI A;  1BN5 A;  4B28 A;  3MX6 A;  3RVA A;  1XGS A;  2GU6 A;  5D6E A;  2EVC A;  5D6F A;  1C23 A;  2V3Y A;  2EA2 A;  2MAT A;  3FM3 A;  1B59 A;  4QR8 A;  3FMR A;  4FLK A;  1QZY A;  1QXW A;  1R5G A;  4IF7 A;  1WBQ A;  4A6W A;  4FLL A;  4IKU A;  1QXY A;  1M35 A;  2Q96 A;  5E5B A;  2BWW A;  1O0X A;  3MAT A;  4FLI A;  1MAT A;  2G6P A;  2ADU A;  2GU7 A;  3IU8 A;  5JHU A;  2BWT A;  3FMQ A;  3MR1 A;  4S01 A;  1XNZ A;  4Z7M A;  1BOA A;  1QXZ A;  1KQ9 A;  2OKN A;  2GGB A;  4IU6 A;  3IU7 A;  2V6C A;  2GU4 A;  1C27 A;  1PV9 A;  2BWV A;  3PKD A;  1JAW A;  2BHD A;  4KM3 A;  1WLR A;  5CIK A;  1YVM A;  1C21 A;  2NQ7 A;  4S2R P;  1W7V A;  1B6A A;  4U76 A;  3IG4 A;  1N51 A;  2GG2 A;  4IDY A;  2EVO A;  5JI6 A;  4ZWO A;  2EA4 A;  4ZWU A;  3PKA A;  1CHM A;  4S2T P;  4FLJ A;  2BWX A;  1WN1 A;  3D27 A;  4IPA A;  2GTX A;  4U70 A;  1C22 A;  3CB5 A;  3BIP A;  2ZSG A;  4U73 A;  4FKC A; 
#chains in the Genus database with same CATH homology
 4U1B A;  5CDE A;  1WY2 A;  2P98 A;  3CTZ A;  2Q95 A;  2Q94 A;  3PKB A;  2EVM A;  2V3X A;  4JUQ A;  2BWS A;  4FUK A;  1C24 A;  2Q8K A;  2Q92 A;  3CB6 A;  3L7G A;  1WKM A;  4FO8 A;  4OOK A;  4A6V A;  2GA2 A;  1YW9 A;  4HXX A;  1WL6 A;  3Q6D A;  4U6Z A;  4FO7 A;  3TAV A;  2B3L A;  2GU5 A;  3ROR A;  2BWY A;  2BH3 A;  2V3Z A;  4MAT A;  2GG9 A;  4RZY A;  4R60 A;  2BB7 A;  5CDV A;  2BN7 A;  4U71 A;  2IW2 A;  3BIQ A;  4IKT A;  4ZWP A;  5CNX A;  1KQ0 A;  2OAZ A;  2GG5 A;  4RGZ 1;  1KP0 A;  1YW8 A;  2GG0 A;  5JFR A;  4U6E A;  2BHB A;  4U6J A;  2BHA A;  4U75 A;  2B3K A;  4PV4 A;  5CE6 A;  1R5H A;  5CDL A;  5CLS A;  1WL9 A;  3PKE A;  1Y1N A;  1XGO A;  3IU9 A;  1A16 A;  4IKR A;  4S00 A;  4U6C A;  4IKS A;  2B3H A;  4RZZ A;  4U6W A;  2GG7 A;  1W2M A;  3L24 A;  3TB5 A;  1YW7 A;  3BIT A;  2P99 A;  4ZNG A;  1R58 A;  2BWU A;  4EGE A;  2HOW A;  2GZ5 A;  5FCF A;  4U69 A;  3S6B A;  2Q93 A;  2P9A A;  1YJ3 A;  5FCH A;  2GG8 A;  1XGN A;  3PKC A;  2GGC A;  4PNC A;  1XGM A;  2BHC A;  2NQ6 A;  4IEC A;  2GG3 A;  2DFI A;  1BN5 A;  4B28 A;  3MX6 A;  3RVA A;  1XGS A;  2GU6 A;  5D6E A;  2EVC A;  5D6F A;  1C23 A;  2V3Y A;  2EA2 A;  2MAT A;  3FM3 A;  1B59 A;  4QR8 A;  3FMR A;  4FLK A;  1QZY A;  1QXW A;  1R5G A;  4IF7 A;  1WBQ A;  4A6W A;  4FLL A;  4IKU A;  1QXY A;  1M35 A;  2Q96 A;  5E5B A;  2BWW A;  1O0X A;  3MAT A;  4FLI A;  1MAT A;  2G6P A;  2ADU A;  2GU7 A;  3IU8 A;  5JHU A;  2BWT A;  3FMQ A;  3MR1 A;  4S01 A;  1XNZ A;  4Z7M A;  1BOA A;  1QXZ A;  1KQ9 A;  2OKN A;  2GGB A;  4IU6 A;  3IU7 A;  2V6C A;  2GU4 A;  1C27 A;  1PV9 A;  2BWV A;  3PKD A;  1JAW A;  2BHD A;  4KM3 A;  1WLR A;  5CIK A;  1YVM A;  1C21 A;  2NQ7 A;  4S2R P;  1W7V A;  1B6A A;  4U76 A;  3IG4 A;  1N51 A;  2GG2 A;  4IDY A;  2EVO A;  5JI6 A;  4ZWO A;  2EA4 A;  4ZWU A;  3PKA A;  1CHM A;  4S2T P;  4FLJ A;  2BWX A;  1WN1 A;  3D27 A;  4IPA A;  2GTX A;  4U70 A;  1C22 A;  3CB5 A;  3BIP A;  2ZSG A;  4U73 A;  4FKC A;
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...
How to cite