1Z99 | Genus

Total Genus 7

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	7
sequence length	42
structure length	42
Chain Sequence	YKQCHKKGGHCFPKEKICLPPSSDFGKMDCRWRWKCCKKGSG

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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Toxin
publication title	Automated NMR structure determination and disulfide bond identification of the myotoxin crotamine from Crotalus durissus terrificus. pubmed doi rcsb
molecule keywords	Crotamine
total genus	7
structure length	42
sequence length	42
ec nomenclature
pdb deposition date	2005-04-01

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
2.20.20.10	Mainly Beta	Single Sheet	Anthopleurin-A	Anthopleurin-A	1z99A00

1SH1A 1ZLHB 1WQKA 2SH1A 2MN3A 1B8WA 1AHLA 2BDSA 2MUBA 2RNGA 1H5OA 3D4UB 1ZUFA 1D6BA 1WXNA 2K2XA 3LMSB 2JTOA 1ZUEA 1APFA 2H9XA 1ATXA 1SHIA 1ZLIB 1Z99A 1BDSA 4GV5A
chains in the Genus database with same CATH superfamily

2HJ9C 2JR3A 1SH1A 3IF4A 1ZLHB 1GL9B 1WQKA 2IKDA 2SH1A 2HJEA 2MN3A 1B8WA 1AHLA 3KEZA 1EL6A 2BDSA 2MUBA 2RNGA 2XXLA 2QSHA 1ZHHB 1H5OA 1ZUFA 3D4UB 3MCXA 2QSGA 2QSFA 3C38A 1D6BA 3C30A 1WXNA 4YIRA 2B9KA 2K2XA 3LMSB 2IKEA 1GKUB 2JTOA 1ZUEA 1APFA 2H9XA 1ATXA 1SHIA 1ZLIB 2DLAA 1Z99A 1BDSA 3MYVA 4GV5A
chains in the Genus database with same CATH topology

2HJ9C 2JR3A 1SH1A 1ZLHB 1WQKA 2SH1A 2IKDA 2HJEA 2MN3A 1B8WA 1AHLA 3KEZA 2BDSA 2MUBA 2RNGA 2XXLA 2QSHA 1ZHHB 1H5OA 1ZUFA 3D4UB 3MCXA 2QSGA 2QSFA 3C38A 1D6BA 3C30A 1WXNA 4YIRA 2B9KA 2K2XA 3LMSB 2IKEA 2JTOA 1ZUEA 1APFA 2H9XA 1ATXA 1SHIA 1ZLIB 2DLAA 1Z99A 1BDSA 3MYVA 4GV5A
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 1SH1 A;  1ZLH B;  1WQK A;  2SH1 A;  2MN3 A;  1B8W A;  1AHL A;  2BDS A;  2MUB A;  2RNG A;  1H5O A;  3D4U B;  1ZUF A;  1D6B A;  1WXN A;  2K2X A;  3LMS B;  2JTO A;  1ZUE A;  1APF A;  2H9X A;  1ATX A;  1SHI A;  1ZLI B;  1Z99 A;  1BDS A;  4GV5 A; 
#chains in the Genus database with same CATH topology
 2HJ9 C;  2JR3 A;  1SH1 A;  3IF4 A;  1ZLH B;  1GL9 B;  1WQK A;  2IKD A;  2SH1 A;  2HJE A;  2MN3 A;  1B8W A;  1AHL A;  3KEZ A;  1EL6 A;  2BDS A;  2MUB A;  2RNG A;  2XXL A;  2QSH A;  1ZHH B;  1H5O A;  1ZUF A;  3D4U B;  3MCX A;  2QSG A;  2QSF A;  3C38 A;  1D6B A;  3C30 A;  1WXN A;  4YIR A;  2B9K A;  2K2X A;  3LMS B;  2IKE A;  1GKU B;  2JTO A;  1ZUE A;  1APF A;  2H9X A;  1ATX A;  1SHI A;  1ZLI B;  2DLA A;  1Z99 A;  1BDS A;  3MYV A;  4GV5 A; 
#chains in the Genus database with same CATH homology
 2HJ9 C;  2JR3 A;  1SH1 A;  1ZLH B;  1WQK A;  2SH1 A;  2IKD A;  2HJE A;  2MN3 A;  1B8W A;  1AHL A;  3KEZ A;  2BDS A;  2MUB A;  2RNG A;  2XXL A;  2QSH A;  1ZHH B;  1H5O A;  1ZUF A;  3D4U B;  3MCX A;  2QSG A;  2QSF A;  3C38 A;  1D6B A;  3C30 A;  1WXN A;  4YIR A;  2B9K A;  2K2X A;  3LMS B;  2IKE A;  2JTO A;  1ZUE A;  1APF A;  2H9X A;  1ATX A;  1SHI A;  1ZLI B;  2DLA A;  1Z99 A;  1BDS A;  3MYV A;  4GV5 A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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1Z99A

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN