2G4RA

Anomalous substructure of moga
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
153
structure length
153
Chain Sequence
TRSARIVVVSSRAAAGVYTDDCGPIIAGWLEQHGFSSVQPQVVADGNPVGEALHDAVNAGVDVIITSGGTGISPTDTTPEHTVAVLDYVIPGLADAIRRSGLPKVPTSVLSRGVCGVAGRTLIINLPGSPGGVRDGLGVLADVLDHALEQIAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title On the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths.
pubmed doi rcsb
molecule tags Biosynthetic protein
source organism Mycobacterium tuberculosis
molecule keywords molybdopterin biosynthesis Mog protein
total genus 48
structure length 153
sequence length 153
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2006-02-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 2g4rA00
1G8LA 2IS8A 2G4RA 2NQVA 4CT8A 3K6AA 4PD0A 2NROA 1T3EA 4UUXA 2NQSA 4TK1A 2NRPA 1UUYA 2F7WA 3PZYA 3RFQA 3KBQA 2FTSA 5ERVA 1XI8A 1O8OA 5ERRA 1FC5A 4TK4A 3MCIA 2NQMA 4PD1A 5ERTA 5ERUA 5ERSA 1IHCA 1O8NA 1R2KA 1MKZA 1EAVA 1G8RA 1UUXA 2NQRA 2NQQA 2NQUA 2PBQA 2FU3A 3MCHA 4TK3A 4UOCA 4CTAB 1JLJA 1WU2A 1Y5EA 2NQKA 3TCRA 2F7YA 3OI9A 4CT9A 2QQ1A 2G2CA 4TWGA 2NQNA 1DI6A 3MCJA 4CTAA 1DI7A 1O8QA 4LHBA 4NWOA 5G2RA 2NRSA 4U91A 4XCWA 4U90A 5G2SA 1UZ5A 5ERQA 4UUWA 3IWTA
chains in the Genus database with same CATH superfamily
4CT8A 3DQQA 1UUYA 1XI8A 1FC5A 3MCIA 5ERSA 1O8NA 2NQQA 1WU2A 1Y5EA 2QQ1A 3MCJA 4U91A 1UZ5A 2G4RA 3K6AA 4TK1A 3PZYA 3KBQA 1O8OA 1R2KA 2NQRA 1UUXA 2NQUA 2F7YA 4TWGA 1DI6A 1O8QA 5G2SA 5ERQA 1YZYA 4UUWA 4UUXA 2IS8A 4PD0A 2NRPA 2F7WA 3RFQA 5ERVA 4TK4A 5ERTA 5ERUA 1IHCA 1EAVA 1MKZA 1G8RA 3MCHA 2FU3A 4CTAB 1JLJA 2NQKA 3OI9A 4CT9A 2G2CA 2NQNA 5G2RA 4LHBA 4XCWA 3IWTA 1G8LA 2NQVA 2NROA 1T3EA 2NQSA 2FTSA 5ERRA 2NQMA 4PD1A 4TK3A 2PBQA 4UOCA 3TCRA 4CTAA 1DI7A 4NWOA 5DMHA 2NRSA 4U90A
chains in the Genus database with same CATH topology
1G8LA 2IS8A 2G4RA 2NQVA 4CT8A 3K6AA 4PD0A 2NROA 1T3EA 4UUXA 2NQSA 4TK1A 2NRPA 1UUYA 2F7WA 3PZYA 3RFQA 3KBQA 2FTSA 5ERVA 1XI8A 1O8OA 5ERRA 1FC5A 4TK4A 3MCIA 2NQMA 4PD1A 5ERTA 5ERUA 5ERSA 1IHCA 1O8NA 1R2KA 1MKZA 1EAVA 1G8RA 1UUXA 2NQRA 2NQQA 2NQUA 2PBQA 2FU3A 3MCHA 4TK3A 4UOCA 4CTAB 1JLJA 1WU2A 1Y5EA 2NQKA 3TCRA 2F7YA 3OI9A 4CT9A 2QQ1A 2G2CA 4TWGA 2NQNA 1DI6A 3MCJA 4CTAA 1DI7A 1O8QA 4LHBA 4NWOA 5G2RA 2NRSA 4U91A 4XCWA 4U90A 5G2SA 1UZ5A 5ERQA 4UUWA 3IWTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1G8L A;  2IS8 A;  2G4R A;  2NQV A;  4CT8 A;  3K6A A;  4PD0 A;  2NRO A;  1T3E A;  4UUX A;  2NQS A;  4TK1 A;  2NRP A;  1UUY A;  2F7W A;  3PZY A;  3RFQ A;  3KBQ A;  2FTS A;  5ERV A;  1XI8 A;  1O8O A;  5ERR A;  1FC5 A;  4TK4 A;  3MCI A;  2NQM A;  4PD1 A;  5ERT A;  5ERU A;  5ERS A;  1IHC A;  1O8N A;  1R2K A;  1MKZ A;  1EAV A;  1G8R A;  1UUX A;  2NQR A;  2NQQ A;  2NQU A;  2PBQ A;  2FU3 A;  3MCH A;  4TK3 A;  4UOC A;  4CTA B;  1JLJ A;  1WU2 A;  1Y5E A;  2NQK A;  3TCR A;  2F7Y A;  3OI9 A;  4CT9 A;  2QQ1 A;  2G2C A;  4TWG A;  2NQN A;  1DI6 A;  3MCJ A;  4CTA A;  1DI7 A;  1O8Q A;  4LHB A;  4NWO A;  5G2R A;  2NRS A;  4U91 A;  4XCW A;  4U90 A;  5G2S A;  1UZ5 A;  5ERQ A;  4UUW A;  3IWT A; 
#chains in the Genus database with same CATH topology
 4CT8 A;  3DQQ A;  1UUY A;  1XI8 A;  1FC5 A;  3MCI A;  5ERS A;  1O8N A;  2NQQ A;  1WU2 A;  1Y5E A;  2QQ1 A;  3MCJ A;  4U91 A;  1UZ5 A;  2G4R A;  3K6A A;  4TK1 A;  3PZY A;  3KBQ A;  1O8O A;  1R2K A;  2NQR A;  1UUX A;  2NQU A;  2F7Y A;  4TWG A;  1DI6 A;  1O8Q A;  5G2S A;  5ERQ A;  1YZY A;  4UUW A;  4UUX A;  2IS8 A;  4PD0 A;  2NRP A;  2F7W A;  3RFQ A;  5ERV A;  4TK4 A;  5ERT A;  5ERU A;  1IHC A;  1EAV A;  1MKZ A;  1G8R A;  3MCH A;  2FU3 A;  4CTA B;  1JLJ A;  2NQK A;  3OI9 A;  4CT9 A;  2G2C A;  2NQN A;  5G2R A;  4LHB A;  4XCW A;  3IWT A;  1G8L A;  2NQV A;  2NRO A;  1T3E A;  2NQS A;  2FTS A;  5ERR A;  2NQM A;  4PD1 A;  4TK3 A;  2PBQ A;  4UOC A;  3TCR A;  4CTA A;  1DI7 A;  4NWO A;  5DMH A;  2NRS A;  4U90 A; 
#chains in the Genus database with same CATH homology
 1G8L A;  2IS8 A;  2G4R A;  2NQV A;  4CT8 A;  3K6A A;  4PD0 A;  2NRO A;  1T3E A;  4UUX A;  2NQS A;  4TK1 A;  2NRP A;  1UUY A;  2F7W A;  3PZY A;  3RFQ A;  3KBQ A;  2FTS A;  5ERV A;  1XI8 A;  1O8O A;  5ERR A;  1FC5 A;  4TK4 A;  3MCI A;  2NQM A;  4PD1 A;  5ERT A;  5ERU A;  5ERS A;  1IHC A;  1O8N A;  1R2K A;  1MKZ A;  1EAV A;  1G8R A;  1UUX A;  2NQR A;  2NQQ A;  2NQU A;  2PBQ A;  2FU3 A;  3MCH A;  4TK3 A;  4UOC A;  4CTA B;  1JLJ A;  1WU2 A;  1Y5E A;  2NQK A;  3TCR A;  2F7Y A;  3OI9 A;  4CT9 A;  2QQ1 A;  2G2C A;  4TWG A;  2NQN A;  1DI6 A;  3MCJ A;  4CTA A;  1DI7 A;  1O8Q A;  4LHB A;  4NWO A;  5G2R A;  2NRS A;  4U91 A;  4XCW A;  4U90 A;  5G2S A;  1UZ5 A;  5ERQ A;  4UUW A;  3IWT A; 
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similar chains in the Genus database (?% sequence similarity)
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