2G4RA

Anomalous substructure of moga
Total Genus 48
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
153
structure length
153
Chain Sequence
TRSARIVVVSSRAAAGVYTDDCGPIIAGWLEQHGFSSVQPQVVADGNPVGEALHDAVNAGVDVIITSGGTGISPTDTTPEHTVAVLDYVIPGLADAIRRSGLPKVPTSVLSRGVCGVAGRTLIINLPGSPGGVRDGLGVLADVLDHALEQIAG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title On the routine use of soft X-rays in macromolecular crystallography. Part IV. Efficient determination of anomalous substructures in biomacromolecules using longer X-ray wavelengths.
pubmed doi rcsb
molecule tags Biosynthetic protein
source organism Mycobacterium tuberculosis
molecule keywords molybdopterin biosynthesis Mog protein
total genus 48
structure length 153
sequence length 153
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2006-02-22

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 2g4rA00
3KBQA 3RFQA 3K6AA 4UOCA 5ERVA 1JLJA 1MKZA 4PD0A 5ERTA 4NWOA 4CT9A 1UUYA 3TCRA 1DI7A 3MCHA 2NQUA 2NQMA 2NRSA 2NQQA 2F7YA 2NQKA 4TK4A 4U91A 4CTAB 4U90A 2G2CA 1R2KA 1O8QA 1IHCA 2PBQA 1O8NA 3OI9A 5ERSA 5G2RA 1G8RA 5ERQA 1DI6A 1FC5A 4TK1A 1WU2A 4UUXA 4UUWA 5G2SA 2G4RA 4CTAA 2QQ1A 1T3EA 1XI8A 2F7WA 2FU3A 2NQRA 4PD1A 4XCWA 5ERUA 1UUXA 1Y5EA 3IWTA 1O8OA 1EAVA 2NROA 2NQVA 3PZYA 4LHBA 4TK3A 3MCJA 2NRPA 4TWGA 1G8LA 3MCIA 5ERRA 1UZ5A 2FTSA 2NQSA 2NQNA 2IS8A 4CT8A
chains in the Genus database with same CATH superfamily
3KBQA 1MKZA 3TCRA 3MCHA 2NQQA 4TK4A 1YZYA 4U90A 3OI9A 1IHCA 5G2RA 5G2SA 2G4RA 2QQ1A 4XCWA 5ERUA 1Y5EA 3IWTA 1EAVA 4LHBA 3MCJA 2NRPA 3RFQA 2NQNA 3K6AA 4UOCA 5ERVA 2NRSA 2NQKA 2G2CA 1R2KA 1O8QA 5ERSA 2PBQA 1G8RA 1WU2A 4UUWA 1O8OA 2NQVA 3PZYA 4TWGA 1G8LA 3MCIA 5ERRA 5ERQA 4PD0A 5ERTA 4CT9A 1DI7A 1O8NA 4TK1A 1T3EA 2FU3A 4PD1A 5DMHA 1UUXA 2NROA 1UZ5A 2FTSA 2NQSA 4CTAB 2IS8A 4CT8A 1JLJA 4NWOA 1UUYA 2NQUA 2NQMA 4U91A 2F7YA 1DI6A 1FC5A 4UUXA 4CTAA 1XI8A 2F7WA 2NQRA 4TK3A 3DQQA
chains in the Genus database with same CATH topology
3KBQA 3RFQA 3K6AA 4UOCA 5ERVA 1JLJA 1MKZA 4PD0A 5ERTA 4NWOA 4CT9A 1UUYA 3TCRA 1DI7A 3MCHA 2NQUA 2NQMA 2NRSA 2NQQA 2F7YA 2NQKA 4TK4A 4U91A 4CTAB 4U90A 2G2CA 1R2KA 1O8QA 1IHCA 2PBQA 1O8NA 3OI9A 5ERSA 5G2RA 1G8RA 5ERQA 1DI6A 1FC5A 4TK1A 1WU2A 4UUXA 4UUWA 5G2SA 2G4RA 4CTAA 2QQ1A 1T3EA 1XI8A 2F7WA 2FU3A 2NQRA 4PD1A 4XCWA 5ERUA 1UUXA 1Y5EA 3IWTA 1O8OA 1EAVA 2NROA 2NQVA 3PZYA 4LHBA 4TK3A 3MCJA 2NRPA 4TWGA 1G8LA 3MCIA 5ERRA 1UZ5A 2FTSA 2NQSA 2NQNA 2IS8A 4CT8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3KBQ A;  3RFQ A;  3K6A A;  4UOC A;  5ERV A;  1JLJ A;  1MKZ A;  4PD0 A;  5ERT A;  4NWO A;  4CT9 A;  1UUY A;  3TCR A;  1DI7 A;  3MCH A;  2NQU A;  2NQM A;  2NRS A;  2NQQ A;  2F7Y A;  2NQK A;  4TK4 A;  4U91 A;  4CTA B;  4U90 A;  2G2C A;  1R2K A;  1O8Q A;  1IHC A;  2PBQ A;  1O8N A;  3OI9 A;  5ERS A;  5G2R A;  1G8R A;  5ERQ A;  1DI6 A;  1FC5 A;  4TK1 A;  1WU2 A;  4UUX A;  4UUW A;  5G2S A;  2G4R A;  4CTA A;  2QQ1 A;  1T3E A;  1XI8 A;  2F7W A;  2FU3 A;  2NQR A;  4PD1 A;  4XCW A;  5ERU A;  1UUX A;  1Y5E A;  3IWT A;  1O8O A;  1EAV A;  2NRO A;  2NQV A;  3PZY A;  4LHB A;  4TK3 A;  3MCJ A;  2NRP A;  4TWG A;  1G8L A;  3MCI A;  5ERR A;  1UZ5 A;  2FTS A;  2NQS A;  2NQN A;  2IS8 A;  4CT8 A; 
#chains in the Genus database with same CATH topology
 3KBQ A;  1MKZ A;  3TCR A;  3MCH A;  2NQQ A;  4TK4 A;  1YZY A;  4U90 A;  3OI9 A;  1IHC A;  5G2R A;  5G2S A;  2G4R A;  2QQ1 A;  4XCW A;  5ERU A;  1Y5E A;  3IWT A;  1EAV A;  4LHB A;  3MCJ A;  2NRP A;  3RFQ A;  2NQN A;  3K6A A;  4UOC A;  5ERV A;  2NRS A;  2NQK A;  2G2C A;  1R2K A;  1O8Q A;  5ERS A;  2PBQ A;  1G8R A;  1WU2 A;  4UUW A;  1O8O A;  2NQV A;  3PZY A;  4TWG A;  1G8L A;  3MCI A;  5ERR A;  5ERQ A;  4PD0 A;  5ERT A;  4CT9 A;  1DI7 A;  1O8N A;  4TK1 A;  1T3E A;  2FU3 A;  4PD1 A;  5DMH A;  1UUX A;  2NRO A;  1UZ5 A;  2FTS A;  2NQS A;  4CTA B;  2IS8 A;  4CT8 A;  1JLJ A;  4NWO A;  1UUY A;  2NQU A;  2NQM A;  4U91 A;  2F7Y A;  1DI6 A;  1FC5 A;  4UUX A;  4CTA A;  1XI8 A;  2F7W A;  2NQR A;  4TK3 A;  3DQQ A; 
#chains in the Genus database with same CATH homology
 3KBQ A;  3RFQ A;  3K6A A;  4UOC A;  5ERV A;  1JLJ A;  1MKZ A;  4PD0 A;  5ERT A;  4NWO A;  4CT9 A;  1UUY A;  3TCR A;  1DI7 A;  3MCH A;  2NQU A;  2NQM A;  2NRS A;  2NQQ A;  2F7Y A;  2NQK A;  4TK4 A;  4U91 A;  4CTA B;  4U90 A;  2G2C A;  1R2K A;  1O8Q A;  1IHC A;  2PBQ A;  1O8N A;  3OI9 A;  5ERS A;  5G2R A;  1G8R A;  5ERQ A;  1DI6 A;  1FC5 A;  4TK1 A;  1WU2 A;  4UUX A;  4UUW A;  5G2S A;  2G4R A;  4CTA A;  2QQ1 A;  1T3E A;  1XI8 A;  2F7W A;  2FU3 A;  2NQR A;  4PD1 A;  4XCW A;  5ERU A;  1UUX A;  1Y5E A;  3IWT A;  1O8O A;  1EAV A;  2NRO A;  2NQV A;  3PZY A;  4LHB A;  4TK3 A;  3MCJ A;  2NRP A;  4TWG A;  1G8L A;  3MCI A;  5ERR A;  1UZ5 A;  2FTS A;  2NQS A;  2NQN A;  2IS8 A;  4CT8 A; 
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similar chains in the Genus database (?% sequence similarity)
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