1UZ5A

The crystal structure of molybdopterin biosynthesis moea protein from pyrococcus horikosii
Total Genus 100
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
100
sequence length
398
structure length
391
Chain Sequence
KVVPLEKALEVVQSFKISPGIEEVPIEKGLGRIAAEDIYSPIDVPPFDRATVDGYAVRAEDTFMASEASPVRLKVIGSVHAGEEPKFKLGKGEAAYISTGAMLPGNADAVIQFEDVERVNGEILIYKPAYPGLGVMKKGIDIEKGRLLVKKGERLGFKQTALLSAVGINKVKVFRKPKVAVISTGNEIVPPGNELKPGQIYDINGRALCDAINELGGEGIFMGVARDDKESLKALIEKAVNVGDVVVISGGADLTASVIEELGEVKVHGIAIQPGKPTIIGVIKGKPVFGLPGYPTSCLTNFTLLVVPLLLRALGREGKIGKKVARLKHKVFSVRRQFLPVKLEGDLAVPILKGSGAVTSFIDADGFVEIPETVESLDEGEEVEVTLFKGW
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
publication title The Crystal Structure of Molybdopterin Biosynthesis Moeaprotein from Pyrococcus Horikosii
rcsb
molecule tags Molybdopterin biosynthesis
source organism Pyrococcus horikoshii
molecule keywords 402AA LONG HYPOTHETICAL MOLYBDOPTERIN BIOSYNTHESIS MOEA PROT
total genus 100
structure length 391
sequence length 398
ec nomenclature
pdb deposition date 2004-03-05

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00994 MoCF_biosynth Probable molybdopterin binding domain
A PF03453 MoeA_N MoeA N-terminal region (domain I and II)
A PF03454 MoeA_C MoeA C-terminal region (domain IV)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.40.340.10 Mainly Beta Beta Barrel Beta-clip MoeA, C-terminal, domain IV 1uz5A04
2.170.190.11 Mainly Beta Beta Complex Molybdopterin biosynthesis moeA protein; domain 3 Molybdopterin biosynthesis moea protein, domain 3. 1uz5A03
3.40.980.10 Alpha Beta 3-Layer(aba) Sandwich Molybdenum Cofactor Biosythetic Enzyme; Chain A MoaB/Mog-like domain 1uz5A01
3.90.105.10 Alpha Beta Alpha-Beta Complex Molybdopterin biosynthesis moea protein, domain 2 Molybdopterin biosynthesis moea protein, domain 2 1uz5A02
1G8RA 4CT9A 1EAVA 4UUWA 3TCRA 2NQSA 5ERRA 1O8QA 1T3EA 1R2KA 4PD1A 2F7YA 2NQRA 4XCWA 2X3LA 5ERQA 2IS8A 5G2SA 4U90A 5ERVA 2NQVA 1FC5A 5G2RA 1O8NA 4TK1A 2G4RA 1XI8A 4TK3A 1G8LA 1Y5EA 4LHBA 2NRSA 4TWGA 1UUXA 2QQ1A 3MCJA 3PZYA 3RFQA 4U91A 2NQMA 5ERSA 2NRPA 4PD0A 4CTAB 1UUYA 4UOCA 1DI7A 1MKZA 2NQQA 3IWTA 2F7WA 2NQKA 3KBQA 4CTAA 3MCHA 1DI6A 4TK4A 2FTSA 1O8OA 2NQNA 1IHCA 5ERTA 2NQUA 4UUXA 2NROA 3MCIA 1UZ5A 3K6AA 3OI9A 2FU3A 4NWOA 4CT8A 2PBQA 2G2CA 1WU2A 1JLJA 5ERUA
chains in the Genus database with same CATH superfamily
1G8RA 4CT9A 1EAVA 4UUWA 3TCRA 2NQSA 5ERRA 1O8QA 3DQQA 1T3EA 1R2KA 4PD1A 5D8HB 2F7YA 2NQRA 4XCWA 2X3LA 5ERQA 2IS8A 5G2SA 4U90A 3JSYA 5ERVA 2NQVA 1FC5A 5G2RA 1O8NA 4TK1A 2G4RA 1XI8A 4TK3A 1G8LA 1Y5EA 5D6GA 4LHBA 2NRSA 5DMHA 4TWGA 1UUXA 2QQ1A 3MCJA 3PZYA 3RFQA 4U91A 2NQMA 5ERSA 2NRPA 4PD0A 1I6VD 4CTAB 1UUYA 4UOCA 1DI7A 1MKZA 2NQQA 3IWTA 2F7WA 4NWBA 2NQKA 3KBQA 4CTAA 3MCHA 1DI6A 1IW7D 1YZYA 4TK4A 2FTSA 1O8OA 2NQNA 1IHCA 5ERTA 1HQMD 2NQUA 4UUXA 2NROA 3MCIA 1UZ5A 3K6AA 3OI9A 2FU3A 4NWOA 4CT8A 2PBQA 2G2CA 1WU2A 1JLJA 5ERUA
chains in the Genus database with same CATH topology
1G8RA 4CT9A 1EAVA 4UUWA 3TCRA 2NQSA 5ERRA 1O8QA 1T3EA 1R2KA 4PD1A 5D8HB 2F7YA 2NQRA 4XCWA 2X3LA 5ERQA 2IS8A 5G2SA 4U90A 3JSYA 5ERVA 2NQVA 1FC5A 5G2RA 1O8NA 4TK1A 2G4RA 1XI8A 4TK3A 1G8LA 1Y5EA 5D6GA 4LHBA 2NRSA 4TWGA 1UUXA 2QQ1A 3MCJA 3PZYA 3RFQA 4U91A 2NQMA 5ERSA 2NRPA 4PD0A 1I6VD 4CTAB 1UUYA 4UOCA 1DI7A 1MKZA 2NQQA 3IWTA 2F7WA 4NWBA 2NQKA 3KBQA 4CTAA 3MCHA 1DI6A 1IW7D 4TK4A 2FTSA 1O8OA 2NQNA 1IHCA 5ERTA 1HQMD 2NQUA 4UUXA 2NROA 3MCIA 1UZ5A 3K6AA 3OI9A 2FU3A 4NWOA 4CT8A 2PBQA 2G2CA 1WU2A 1JLJA 5ERUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1G8R A;  4CT9 A;  1EAV A;  4UUW A;  3TCR A;  2NQS A;  5ERR A;  1O8Q A;  1T3E A;  1R2K A;  4PD1 A;  2F7Y A;  2NQR A;  4XCW A;  2X3L A;  5ERQ A;  2IS8 A;  5G2S A;  4U90 A;  5ERV A;  2NQV A;  1FC5 A;  5G2R A;  1O8N A;  4TK1 A;  2G4R A;  1XI8 A;  4TK3 A;  1G8L A;  1Y5E A;  4LHB A;  2NRS A;  4TWG A;  1UUX A;  2QQ1 A;  3MCJ A;  3PZY A;  3RFQ A;  4U91 A;  2NQM A;  5ERS A;  2NRP A;  4PD0 A;  4CTA B;  1UUY A;  4UOC A;  1DI7 A;  1MKZ A;  2NQQ A;  3IWT A;  2F7W A;  2NQK A;  3KBQ A;  4CTA A;  3MCH A;  1DI6 A;  4TK4 A;  2FTS A;  1O8O A;  2NQN A;  1IHC A;  5ERT A;  2NQU A;  4UUX A;  2NRO A;  3MCI A;  1UZ5 A;  3K6A A;  3OI9 A;  2FU3 A;  4NWO A;  4CT8 A;  2PBQ A;  2G2C A;  1WU2 A;  1JLJ A;  5ERU A; 
#chains in the Genus database with same CATH topology
 1G8R A;  4CT9 A;  1EAV A;  4UUW A;  3TCR A;  2NQS A;  5ERR A;  1O8Q A;  3DQQ A;  1T3E A;  1R2K A;  4PD1 A;  5D8H B;  2F7Y A;  2NQR A;  4XCW A;  2X3L A;  5ERQ A;  2IS8 A;  5G2S A;  4U90 A;  3JSY A;  5ERV A;  2NQV A;  1FC5 A;  5G2R A;  1O8N A;  4TK1 A;  2G4R A;  1XI8 A;  4TK3 A;  1G8L A;  1Y5E A;  5D6G A;  4LHB A;  2NRS A;  5DMH A;  4TWG A;  1UUX A;  2QQ1 A;  3MCJ A;  3PZY A;  3RFQ A;  4U91 A;  2NQM A;  5ERS A;  2NRP A;  4PD0 A;  1I6V D;  4CTA B;  1UUY A;  4UOC A;  1DI7 A;  1MKZ A;  2NQQ A;  3IWT A;  2F7W A;  4NWB A;  2NQK A;  3KBQ A;  4CTA A;  3MCH A;  1DI6 A;  1IW7 D;  1YZY A;  4TK4 A;  2FTS A;  1O8O A;  2NQN A;  1IHC A;  5ERT A;  1HQM D;  2NQU A;  4UUX A;  2NRO A;  3MCI A;  1UZ5 A;  3K6A A;  3OI9 A;  2FU3 A;  4NWO A;  4CT8 A;  2PBQ A;  2G2C A;  1WU2 A;  1JLJ A;  5ERU A; 
#chains in the Genus database with same CATH homology
 1G8R A;  4CT9 A;  1EAV A;  4UUW A;  3TCR A;  2NQS A;  5ERR A;  1O8Q A;  1T3E A;  1R2K A;  4PD1 A;  5D8H B;  2F7Y A;  2NQR A;  4XCW A;  2X3L A;  5ERQ A;  2IS8 A;  5G2S A;  4U90 A;  3JSY A;  5ERV A;  2NQV A;  1FC5 A;  5G2R A;  1O8N A;  4TK1 A;  2G4R A;  1XI8 A;  4TK3 A;  1G8L A;  1Y5E A;  5D6G A;  4LHB A;  2NRS A;  4TWG A;  1UUX A;  2QQ1 A;  3MCJ A;  3PZY A;  3RFQ A;  4U91 A;  2NQM A;  5ERS A;  2NRP A;  4PD0 A;  1I6V D;  4CTA B;  1UUY A;  4UOC A;  1DI7 A;  1MKZ A;  2NQQ A;  3IWT A;  2F7W A;  4NWB A;  2NQK A;  3KBQ A;  4CTA A;  3MCH A;  1DI6 A;  1IW7 D;  4TK4 A;  2FTS A;  1O8O A;  2NQN A;  1IHC A;  5ERT A;  1HQM D;  2NQU A;  4UUX A;  2NRO A;  3MCI A;  1UZ5 A;  3K6A A;  3OI9 A;  2FU3 A;  4NWO A;  4CT8 A;  2PBQ A;  2G2C A;  1WU2 A;  1JLJ A;  5ERU A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...